Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2244

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,395,180	+				+1.2
2,395,180	+				-0.9
2,395,180	+				+1.4
2,395,181	-				-0.1
2,395,181	-				+0.3
2,395,181	-				-0.4
2,395,223	+				-0.7
2,395,223	+				+0.0
2,395,224	-				-1.1
2,395,224	-				-1.0
2,395,224	-				+1.5
2,395,224	-				-1.0
2,395,224	-				-0.9
2,395,829	+		Psest_2243	0.68	-1.1
2,395,829	+		Psest_2243	0.68	-1.4
2,396,304	+		Psest_2244	0.39	+0.9
2,396,304	+		Psest_2244	0.39	-1.1
2,396,304	+		Psest_2244	0.39	+1.1
2,396,304	+		Psest_2244	0.39	-2.6
2,396,304	+		Psest_2244	0.39	-0.3
2,396,304	+		Psest_2244	0.39	+1.9
2,396,304	+		Psest_2244	0.39	+0.1
2,396,304	+		Psest_2244	0.39	+1.9
2,396,304	+		Psest_2244	0.39	-0.7
2,396,304	+		Psest_2244	0.39	-1.0
2,396,304	+		Psest_2244	0.39	+0.8
2,396,304	+		Psest_2244	0.39	+0.6
2,396,305	-		Psest_2244	0.39	-0.9
2,396,305	-		Psest_2244	0.39	-0.3
2,396,305	-		Psest_2244	0.39	-2.1
2,396,305	-		Psest_2244	0.39	-1.4
2,396,325	+		Psest_2244	0.45	+0.8
2,396,325	+		Psest_2244	0.45	-0.8
2,396,325	+		Psest_2244	0.45	-2.0
2,396,326	-		Psest_2244	0.46	+0.2
2,396,326	-		Psest_2244	0.46	-1.1
2,396,410	+		Psest_2244	0.71	-0.9
2,396,410	+		Psest_2244	0.71	-1.0
2,396,410	+		Psest_2244	0.71	-0.3
2,396,410	+		Psest_2244	0.71	-1.0
2,396,410	+		Psest_2244	0.71	-1.5
2,396,411	-		Psest_2244	0.72	+1.7
2,396,411	-		Psest_2244	0.72	-0.7
2,396,436	+		Psest_2244	0.79	+0.9
2,396,437	-		Psest_2244	0.80	+1.1
2,396,494	+				+0.2
2,396,980	-				-0.0
2,396,995	+				+1.0
2,396,995	+				+2.0
2,396,995	+				-0.7
2,396,995	+				+0.8
2,396,996	-				+0.8
2,396,996	-				-0.5
2,397,103	+		Psest_2246	0.11	-0.9
2,397,173	-		Psest_2246	0.20	+3.0
2,397,176	-		Psest_2246	0.21	+0.2
2,397,176	-		Psest_2246	0.21	-0.1