Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1767

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,867,698	-		Psest_1766	0.21	-1.6
1,867,772	+		Psest_1766	0.27	-0.6
1,867,773	-		Psest_1766	0.27	+1.5
1,867,866	+		Psest_1766	0.35	-1.0
1,867,866	+		Psest_1766	0.35	-1.6
1,867,867	-		Psest_1766	0.35	-2.4
1,867,867	-		Psest_1766	0.35	+1.3
1,868,025	-		Psest_1766	0.48	+0.4
1,868,028	+		Psest_1766	0.49	-0.3
1,868,029	-		Psest_1766	0.49	-2.8
1,868,029	-		Psest_1766	0.49	-1.2
1,868,039	+		Psest_1766	0.50	-0.8
1,868,039	+		Psest_1766	0.50	+1.0
1,868,040	-		Psest_1766	0.50	+0.8
1,868,040	-		Psest_1766	0.50	-0.3
1,868,040	-		Psest_1766	0.50	-1.3
1,868,040	-		Psest_1766	0.50	-0.1
1,868,040	-		Psest_1766	0.50	-0.7
1,868,040	-		Psest_1766	0.50	-0.9
1,868,040	-		Psest_1766	0.50	+0.6
1,868,040	-		Psest_1766	0.50	+0.6
1,868,040	-		Psest_1766	0.50	-0.8
1,868,041	+		Psest_1766	0.50	-0.9
1,868,041	+		Psest_1766	0.50	+0.9
1,868,041	+		Psest_1766	0.50	-0.1
1,868,041	+		Psest_1766	0.50	+0.7
1,868,042	-		Psest_1766	0.50	-0.2
1,868,409	+		Psest_1766	0.81	+0.0
1,868,409	+		Psest_1766	0.81	+1.5
1,868,409	+		Psest_1766	0.81	-2.0
1,868,410	-		Psest_1766	0.81	-0.3
1,868,410	-		Psest_1766	0.81	-0.4
1,868,410	-		Psest_1766	0.81	-1.0
1,868,410	-		Psest_1766	0.81	-1.3
1,868,410	-		Psest_1766	0.81	-0.9
1,868,410	-		Psest_1766	0.81	+1.4
1,868,410	-		Psest_1766	0.81	+0.7
1,868,653	+				-0.2
1,868,653	+				-0.1
1,868,653	+				+0.9
1,868,653	+				-0.1
1,868,653	+				+1.0
1,868,654	-				-1.3
1,868,654	-				+1.6
1,868,696	+				-0.3
1,868,697	-				-0.5
1,868,698	+				+2.0
1,868,977	+		Psest_1767	0.24	-0.5
1,868,977	+		Psest_1767	0.24	+2.0
1,868,977	+		Psest_1767	0.24	-0.8
1,868,978	-		Psest_1767	0.24	-1.1
1,868,978	-		Psest_1767	0.24	-0.2
1,869,048	-		Psest_1767	0.29	+0.0
1,869,137	-		Psest_1767	0.36	-1.7
1,869,137	-		Psest_1767	0.36	-1.1
1,869,137	-		Psest_1767	0.36	-2.3
1,869,147	+		Psest_1767	0.36	-2.3
1,869,173	+		Psest_1767	0.38	+0.2
1,869,173	+		Psest_1767	0.38	-0.2
1,869,186	-		Psest_1767	0.39	-0.1
1,869,416	+		Psest_1767	0.56	+0.1
1,869,416	+		Psest_1767	0.56	-1.3
1,869,417	-		Psest_1767	0.56	+1.7
1,869,417	-		Psest_1767	0.56	-2.6
1,869,419	+		Psest_1767	0.56	-1.0
1,869,419	+		Psest_1767	0.56	+0.5
1,869,419	+		Psest_1767	0.56	-0.9
1,869,419	+		Psest_1767	0.56	-1.3
1,869,472	+		Psest_1767	0.60	+0.9
1,869,501	+		Psest_1767	0.62	-1.7
1,869,501	+		Psest_1767	0.62	-1.1
1,869,502	-		Psest_1767	0.62	-0.5
1,869,502	-		Psest_1767	0.62	-2.2
1,869,502	-		Psest_1767	0.62	+2.1
1,869,505	-		Psest_1767	0.62	-2.1
1,870,026	+				+0.2
1,870,026	+				-0.3
1,870,026	+				-1.1
1,870,027	-				+0.7
1,870,027	-				-0.7
1,870,052	+				+0.9
1,870,052	+				+0.2
1,870,052	+				+2.0
1,870,052	+				+1.1
1,870,052	+				+0.1
1,870,052	+				-1.0
1,870,052	+				+0.4
1,870,052	+				+0.2
1,870,053	-				-1.9
1,870,159	+				-0.3
1,870,159	+				+0.1
1,870,159	+				+1.3
1,870,159	+				-0.7
1,870,159	+				-1.8
1,870,160	-				+1.5
1,870,160	-				+0.1
1,870,160	-				-0.9
1,870,160	-				-1.5
1,870,455	+		Psest_1768	0.55	+1.0
1,870,474	+		Psest_1768	0.57	-2.3
1,870,629	+		Psest_1768	0.81	+0.1
1,870,630	-		Psest_1768	0.81	+0.7
1,870,691	+				-2.5
1,870,691	+				-0.1
1,870,691	+				-0.1
1,870,691	+				+0.7
1,870,691	+				-1.3
1,870,692	-				-0.8