Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1607

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,709,872	-		Psest_1605	0.89	+0.2
1,710,030	+				+0.9
1,710,157	+		Psest_1606	0.18	+1.3
1,710,157	+		Psest_1606	0.18	-0.0
1,710,157	+		Psest_1606	0.18	+0.3
1,710,157	+		Psest_1606	0.18	+2.0
1,710,158	-		Psest_1606	0.18	-0.2
1,710,171	-		Psest_1606	0.20	-0.5
1,710,171	-		Psest_1606	0.20	-0.1
1,710,175	+		Psest_1606	0.21	-0.8
1,710,176	-		Psest_1606	0.21	+2.0
1,710,220	+		Psest_1606	0.27	+0.3
1,710,220	+		Psest_1606	0.27	-0.6
1,710,220	+		Psest_1606	0.27	+0.5
1,710,220	+		Psest_1606	0.27	+0.3
1,710,221	-		Psest_1606	0.28	+4.0
1,710,221	-		Psest_1606	0.28	-1.1
1,710,703	+				-0.8
1,710,703	+				+1.1
1,710,703	+				+0.8
1,710,703	+				-0.4
1,710,703	+				-0.2
1,710,704	-				-3.1
1,710,704	-				-1.0
1,710,715	-				+0.5
1,710,778	+				-0.2
1,710,779	-				-0.1
1,710,779	-				-2.0
1,710,820	-				-1.9
1,710,972	-		Psest_1607	0.25	-0.8
1,710,984	+		Psest_1607	0.28	-0.3
1,710,984	+		Psest_1607	0.28	+0.6
1,710,984	+		Psest_1607	0.28	+0.5
1,710,984	+		Psest_1607	0.28	-0.6
1,710,985	-		Psest_1607	0.28	-1.6
1,711,164	+		Psest_1607	0.66	+0.7
1,711,164	+		Psest_1607	0.66	-2.2
1,711,165	-		Psest_1607	0.66	-0.0
1,711,194	+		Psest_1607	0.72	-0.8
1,711,194	+		Psest_1607	0.72	-1.7
1,711,194	+		Psest_1607	0.72	-0.3
1,711,194	+		Psest_1607	0.72	-1.6
1,711,194	+		Psest_1607	0.72	-2.5
1,711,195	-		Psest_1607	0.73	-0.0
1,711,195	-		Psest_1607	0.73	-1.5
1,711,195	-		Psest_1607	0.73	+0.3
1,711,626	+		Psest_1608	0.14	-1.3
1,711,626	+		Psest_1608	0.14	+0.9
1,711,626	+		Psest_1608	0.14	-0.7
1,711,626	+		Psest_1608	0.14	+1.3
1,711,626	+		Psest_1608	0.14	+0.8
1,711,627	-		Psest_1608	0.14	+0.3
1,711,627	-		Psest_1608	0.14	-1.4
1,711,627	-		Psest_1608	0.14	+0.1
1,711,627	-		Psest_1608	0.14	-1.6
1,711,627	-		Psest_1608	0.14	+0.0
1,711,627	-		Psest_1608	0.14	-0.4
1,711,627	-		Psest_1608	0.14	+0.2
1,711,710	+		Psest_1608	0.17	+0.2
1,711,710	+		Psest_1608	0.17	-1.7
1,711,710	+		Psest_1608	0.17	+2.1
1,711,710	+		Psest_1608	0.17	-0.3
1,711,710	+		Psest_1608	0.17	+0.1
1,711,711	-		Psest_1608	0.17	+1.3
1,711,711	-		Psest_1608	0.17	+1.9
1,711,711	-		Psest_1608	0.17	+0.6
1,711,711	-		Psest_1608	0.17	+0.6
1,711,711	-		Psest_1608	0.17	-0.6
1,711,711	-		Psest_1608	0.17	-0.3
1,711,942	-		Psest_1608	0.27	+1.3
1,711,944	+		Psest_1608	0.27	-0.8
1,711,944	+		Psest_1608	0.27	-2.4
1,711,944	+		Psest_1608	0.27	-1.3
1,711,944	+		Psest_1608	0.27	+1.1
1,711,944	+		Psest_1608	0.27	+0.6
1,711,944	+		Psest_1608	0.27	-0.5
1,711,944	+		Psest_1608	0.27	+0.1
1,711,945	-		Psest_1608	0.27	-2.0
1,711,945	-		Psest_1608	0.27	-2.1
1,711,945	-		Psest_1608	0.27	+0.5
1,711,945	-		Psest_1608	0.27	-1.2
1,711,977	+		Psest_1608	0.28	+0.3
1,712,034	+		Psest_1608	0.30	-0.0