Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1528

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,629,956	+		Psest_1527	0.81	+2.3
1,630,214	+		Psest_1527	0.89	-0.7
1,630,214	+		Psest_1527	0.89	+1.3
1,630,214	+		Psest_1527	0.89	+0.4
1,630,214	+		Psest_1527	0.89	-0.1
1,630,214	+		Psest_1527	0.89	+2.2
1,630,214	+		Psest_1527	0.89	-1.2
1,630,215	-		Psest_1527	0.89	+0.4
1,630,215	-		Psest_1527	0.89	-0.5
1,630,215	-		Psest_1527	0.89	-0.2
1,630,261	+				-1.2
1,630,388	+				-0.4
1,630,388	+				-1.4
1,630,388	+				+0.4
1,630,389	-				-1.3
1,630,389	-				+0.9
1,630,389	-				+0.3
1,630,389	-				-0.3
1,630,389	-				-0.4
1,630,460	+				-0.4
1,630,460	+				-0.8
1,630,460	+				-0.8
1,630,482	-				+1.7
1,630,532	+				+2.4
1,630,532	+				+1.6
1,630,533	-				+1.0
1,630,560	+				-0.8
1,630,560	+				-0.5
1,630,560	+				+0.1
1,630,560	+				+2.4
1,630,561	-				+0.0
1,630,561	-				-0.4
1,630,562	+				+1.8
1,630,562	+				+1.8
1,630,562	+				-1.8
1,630,562	+				+1.2
1,630,562	+				-1.9
1,630,562	+				+0.8
1,630,562	+				+2.4
1,630,562	+				+0.5
1,630,562	+				-0.6
1,630,562	+				+0.7
1,630,563	-				-3.5
1,630,563	-				+0.9
1,630,563	-				-1.4
1,630,563	-				+1.0
1,630,563	-				-0.6
1,630,563	-				-0.9
1,630,563	-				-1.0
1,630,563	-				+0.2
1,630,661	+				+1.3
1,630,694	+				+1.8
1,630,694	+				+2.1
1,630,694	+				+2.1
1,630,694	+				+0.2
1,630,694	+				-0.8
1,630,694	+				+0.6
1,630,694	+				+0.6
1,630,695	-				-4.0
1,630,695	-				+4.8
1,630,695	-				-1.3
1,630,695	-				+0.8
1,630,696	+				-0.0
1,630,769	+				-1.5
1,630,770	-				-1.3
1,631,128	-		Psest_1528	0.45	-0.6
1,631,128	-		Psest_1528	0.45	-0.6
1,631,259	+		Psest_1528	0.68	+0.1
1,631,260	-		Psest_1528	0.68	-0.5
1,631,260	-		Psest_1528	0.68	+0.0
1,631,260	-		Psest_1528	0.68	-0.5
1,631,327	+		Psest_1528	0.80	-0.6
1,631,327	+		Psest_1528	0.80	-0.2
1,631,328	-		Psest_1528	0.81	-1.5
1,631,455	+				-0.8
1,631,469	+				+2.8
1,631,469	+				+1.0
1,631,470	-				+0.6
1,631,470	-				-2.0
1,631,470	-				-1.0
1,631,542	+				+3.2
1,631,542	+				+0.2
1,631,542	+				+1.0
1,631,542	+				-0.4
1,631,580	+				+1.2
1,631,580	+				-0.8
1,631,580	+				+2.3
1,631,581	-				+0.8
1,631,581	-				+0.8
1,631,581	-				-1.0
1,631,581	-				+0.2
1,631,846	+		Psest_1529	0.35	+0.0
1,631,846	+		Psest_1529	0.35	+0.0
1,631,846	+		Psest_1529	0.35	+0.5
1,631,846	+		Psest_1529	0.35	+0.7
1,631,846	+		Psest_1529	0.35	+0.6
1,631,846	+		Psest_1529	0.35	-0.1
1,631,847	-		Psest_1529	0.35	-1.1
1,631,847	-		Psest_1529	0.35	-0.9
1,631,847	-		Psest_1529	0.35	+1.9
1,631,847	-		Psest_1529	0.35	-0.0
1,631,847	-		Psest_1529	0.35	-1.0
1,631,848	+		Psest_1529	0.35	+0.4
1,631,975	+		Psest_1529	0.53	+1.3
1,632,014	+		Psest_1529	0.59	+0.2
1,632,014	+		Psest_1529	0.59	-0.7
1,632,014	+		Psest_1529	0.59	-0.3
1,632,014	+		Psest_1529	0.59	+2.1
1,632,014	+		Psest_1529	0.59	+0.6
1,632,014	+		Psest_1529	0.59	+0.3
1,632,014	+		Psest_1529	0.59	-0.2
1,632,014	+		Psest_1529	0.59	-3.3
1,632,014	+		Psest_1529	0.59	+0.6
1,632,014	+		Psest_1529	0.59	+0.3
1,632,014	+		Psest_1529	0.59	-0.4
1,632,014	+		Psest_1529	0.59	+2.6
1,632,014	+		Psest_1529	0.59	+1.0
1,632,014	+		Psest_1529	0.59	+0.1
1,632,014	+		Psest_1529	0.59	+1.6
1,632,014	+		Psest_1529	0.59	+0.7
1,632,014	+		Psest_1529	0.59	-0.6
1,632,015	-		Psest_1529	0.59	+0.7
1,632,015	-		Psest_1529	0.59	+0.1
1,632,015	-		Psest_1529	0.59	+1.7
1,632,015	-		Psest_1529	0.59	+0.2
1,632,015	-		Psest_1529	0.59	-0.3
1,632,015	-		Psest_1529	0.59	-1.4
1,632,015	-		Psest_1529	0.59	+0.6
1,632,015	-		Psest_1529	0.59	-0.1
1,632,015	-		Psest_1529	0.59	-0.2
1,632,015	-		Psest_1529	0.59	+2.0
1,632,015	-		Psest_1529	0.59	-1.5
1,632,015	-		Psest_1529	0.59	-1.0
1,632,015	-		Psest_1529	0.59	-1.3
1,632,015	-		Psest_1529	0.59	+0.2
1,632,015	-		Psest_1529	0.59	+0.6
1,632,015	-		Psest_1529	0.59	+0.9
1,632,015	-		Psest_1529	0.59	-1.6
1,632,015	-		Psest_1529	0.59	+0.7
1,632,210	-		Psest_1529	0.86	+0.3
1,632,210	-		Psest_1529	0.86	-1.6
1,632,306	+				-0.9
1,632,307	-				+0.2
1,632,312	+				-0.2
1,632,325	-				-0.9
1,632,325	-				-1.0
1,632,361	+		Psest_1530	0.17	-0.0
1,632,421	+		Psest_1530	0.35	+0.4
1,632,421	+		Psest_1530	0.35	+1.2
1,632,421	+		Psest_1530	0.35	-0.6
1,632,421	+		Psest_1530	0.35	+0.5
1,632,422	-		Psest_1530	0.35	+0.6
1,632,422	-		Psest_1530	0.35	-1.0
1,632,422	-		Psest_1530	0.35	-1.7
1,632,422	-		Psest_1530	0.35	-1.2
1,632,422	-		Psest_1530	0.35	+1.0
1,632,422	-		Psest_1530	0.35	+0.9
1,632,422	-		Psest_1530	0.35	-0.4
1,632,422	-		Psest_1530	0.35	-2.0