Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1364

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,473,688	+		Psest_1363	0.89	+0.1
1,473,688	+		Psest_1363	0.89	+2.8
1,473,688	+		Psest_1363	0.89	+2.1
1,473,689	-		Psest_1363	0.89	-1.0
1,473,689	-		Psest_1363	0.89	-1.0
1,473,689	-		Psest_1363	0.89	-1.2
1,473,733	+				+0.5
1,473,733	+				-1.8
1,473,733	+				-0.8
1,473,733	+				-0.7
1,473,733	+				+0.8
1,473,733	+				-0.5
1,473,733	+				-0.6
1,473,733	+				+1.6
1,473,733	+				-1.3
1,473,733	+				-2.2
1,473,733	+				+2.4
1,473,734	-				-0.2
1,473,868	-				-0.4
1,473,868	-				-1.8
1,473,884	+				+0.3
1,474,141	-				+0.1
1,474,176	+		Psest_1364	0.18	-1.8
1,474,176	+		Psest_1364	0.18	-0.2
1,474,176	+		Psest_1364	0.18	+0.1
1,474,176	+		Psest_1364	0.18	-0.2
1,474,176	+		Psest_1364	0.18	-2.8
1,474,177	-		Psest_1364	0.18	-0.4
1,474,177	-		Psest_1364	0.18	+0.3
1,474,177	-		Psest_1364	0.18	-1.8
1,474,177	-		Psest_1364	0.18	-2.2
1,474,177	-		Psest_1364	0.18	-1.5
1,474,187	+		Psest_1364	0.21	+0.6
1,474,187	+		Psest_1364	0.21	+0.2
1,474,187	+		Psest_1364	0.21	-0.2
1,474,188	-		Psest_1364	0.21	+1.4
1,474,188	-		Psest_1364	0.21	+1.4
1,474,188	-		Psest_1364	0.21	+1.7
1,474,242	+		Psest_1364	0.35	+1.0
1,474,243	-		Psest_1364	0.35	-2.8
1,474,317	+		Psest_1364	0.53	-1.2
1,474,317	+		Psest_1364	0.53	+3.1
1,474,317	+		Psest_1364	0.53	-1.6
1,474,420	-		Psest_1364	0.79	-1.6
1,474,420	-		Psest_1364	0.79	+1.6
1,474,576	+				+0.3
1,474,646	-				-0.4
1,474,646	-				-1.1
1,474,646	-				+1.6
1,474,646	-				+2.6
1,474,996	+		Psest_1365	0.18	-1.3
1,474,996	+		Psest_1365	0.18	+0.8
1,474,997	-		Psest_1365	0.18	+0.4
1,474,997	-		Psest_1365	0.18	+1.7
1,475,192	+		Psest_1365	0.27	-1.7
1,475,193	-		Psest_1365	0.27	+0.0
1,475,193	-		Psest_1365	0.27	-1.4
1,475,193	-		Psest_1365	0.27	-0.5
1,475,195	+		Psest_1365	0.28	+0.1