Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1087

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,177,012	+		Psest_1086	0.45	-0.0
1,177,012	+		Psest_1086	0.45	-0.7
1,177,144	+		Psest_1086	0.53	-0.1
1,177,144	+		Psest_1086	0.53	-0.0
1,177,144	+		Psest_1086	0.53	-0.6
1,177,144	+		Psest_1086	0.53	+1.0
1,177,144	+		Psest_1086	0.53	-1.4
1,177,144	+		Psest_1086	0.53	+0.5
1,177,144	+		Psest_1086	0.53	-1.1
1,177,144	+		Psest_1086	0.53	-0.1
1,177,144	+		Psest_1086	0.53	+1.0
1,177,144	+		Psest_1086	0.53	+2.4
1,177,144	+		Psest_1086	0.53	+0.1
1,177,144	+		Psest_1086	0.53	+1.1
1,177,144	+		Psest_1086	0.53	-2.0
1,177,144	+		Psest_1086	0.53	+0.6
1,177,144	+		Psest_1086	0.53	-0.5
1,177,144	+		Psest_1086	0.53	+0.8
1,177,145	-		Psest_1086	0.53	-1.5
1,177,145	-		Psest_1086	0.53	+0.8
1,177,145	-		Psest_1086	0.53	+0.8
1,177,145	-		Psest_1086	0.53	+0.5
1,177,145	-		Psest_1086	0.53	-1.9
1,177,145	-		Psest_1086	0.53	-0.2
1,177,145	-		Psest_1086	0.53	+0.7
1,177,307	-		Psest_1086	0.62	+0.3
1,177,585	+		Psest_1086	0.79	-0.5
1,177,585	+		Psest_1086	0.79	+1.2
1,177,585	+		Psest_1086	0.79	-0.6
1,177,586	-		Psest_1086	0.79	-0.2
1,177,586	-		Psest_1086	0.79	-0.5
1,177,586	-		Psest_1086	0.79	+1.1
1,177,586	-		Psest_1086	0.79	-0.2
1,178,010	+				-1.1
1,178,011	-				-0.9
1,178,051	+				+1.6
1,178,051	+				+1.0
1,178,174	-		Psest_1087	0.29	-1.6
1,178,348	-		Psest_1087	0.58	-0.1
1,178,566	+				+0.1
1,178,567	-				+0.9
1,178,567	-				-0.5
1,178,635	-				-1.1
1,178,706	+				-0.6
1,178,706	+				+1.6
1,178,707	-				+0.2
1,178,707	-				+0.7
1,178,707	-				-2.5
1,178,836	+		Psest_1088	0.10	-0.9
1,178,836	+		Psest_1088	0.10	-0.7
1,178,836	+		Psest_1088	0.10	+1.6
1,178,836	+		Psest_1088	0.10	+0.6
1,178,836	+		Psest_1088	0.10	-0.3
1,178,836	+		Psest_1088	0.10	+1.7
1,178,836	+		Psest_1088	0.10	+1.1
1,178,837	-		Psest_1088	0.10	-0.7
1,178,837	-		Psest_1088	0.10	+3.1
1,178,837	-		Psest_1088	0.10	-1.4
1,178,837	-		Psest_1088	0.10	+2.7
1,178,838	+		Psest_1088	0.10	+0.7
1,178,839	-		Psest_1088	0.10	+2.1
1,179,062	-		Psest_1088	0.28	-0.7
1,179,182	-		Psest_1088	0.37	-0.6
1,179,237	+		Psest_1088	0.42	+1.0
1,179,237	+		Psest_1088	0.42	+0.8
1,179,237	+		Psest_1088	0.42	+0.5
1,179,400	+		Psest_1088	0.54	+0.5
1,179,400	+		Psest_1088	0.54	-1.0
1,179,400	+		Psest_1088	0.54	-0.4
1,179,401	-		Psest_1088	0.54	+1.2
1,179,403	+		Psest_1088	0.55	-2.5
1,179,403	+		Psest_1088	0.55	+1.1
1,179,403	+		Psest_1088	0.55	+0.4
1,179,403	+		Psest_1088	0.55	+0.7
1,179,403	+		Psest_1088	0.55	-1.3
1,179,403	+		Psest_1088	0.55	+1.3
1,179,403	+		Psest_1088	0.55	-1.2
1,179,404	-		Psest_1088	0.55	-0.4
1,179,404	-		Psest_1088	0.55	-1.3
1,179,404	-		Psest_1088	0.55	-1.1
1,179,404	-		Psest_1088	0.55	+1.0
1,179,404	-		Psest_1088	0.55	+0.5
1,179,407	-		Psest_1088	0.55	-1.2
1,179,407	-		Psest_1088	0.55	+1.4
1,179,427	+		Psest_1088	0.56	+0.8
1,179,427	+		Psest_1088	0.56	-0.0
1,179,428	-		Psest_1088	0.57	+0.4
1,179,428	-		Psest_1088	0.57	-0.5
1,179,428	-		Psest_1088	0.57	+0.4
1,179,568	+		Psest_1088	0.68	+1.9
1,179,568	+		Psest_1088	0.68	+1.6
1,179,569	-		Psest_1088	0.68	-2.1
1,179,569	-		Psest_1088	0.68	+1.4
1,179,569	-		Psest_1088	0.68	+0.5