Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09820

Experiment: NLDM_defined low phosphorus; stationary

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low phosphorus; stationary
2,142,080	+		LRK54_RS09815	0.60	-1.8
2,142,080	+		LRK54_RS09815	0.60	-0.5
2,142,080	+		LRK54_RS09815	0.60	-0.6
2,142,080	+		LRK54_RS09815	0.60	+0.3
2,142,080	+		LRK54_RS09815	0.60	-1.0
2,142,080	+		LRK54_RS09815	0.60	+1.1
2,142,080	+		LRK54_RS09815	0.60	-0.7
2,142,080	+		LRK54_RS09815	0.60	+0.3
2,142,081	-		LRK54_RS09815	0.60	+0.9
2,142,081	-		LRK54_RS09815	0.60	-2.2
2,142,081	-		LRK54_RS09815	0.60	-1.0
2,142,081	-		LRK54_RS09815	0.60	-0.0
2,142,081	-		LRK54_RS09815	0.60	-1.3
2,142,081	-		LRK54_RS09815	0.60	+0.3
2,142,081	-		LRK54_RS09815	0.60	+0.1
2,142,081	-		LRK54_RS09815	0.60	-0.7
2,142,149	+		LRK54_RS09815	0.63	+0.6
2,142,149	+		LRK54_RS09815	0.63	+1.3
2,142,149	+		LRK54_RS09815	0.63	+0.0
2,142,149	+		LRK54_RS09815	0.63	+0.6
2,142,149	+		LRK54_RS09815	0.63	-0.5
2,142,149	+		LRK54_RS09815	0.63	-1.0
2,142,149	+		LRK54_RS09815	0.63	+0.0
2,142,149	+		LRK54_RS09815	0.63	-0.3
2,142,149	+		LRK54_RS09815	0.63	-0.7
2,142,149	+		LRK54_RS09815	0.63	+0.3
2,142,149	+		LRK54_RS09815	0.63	-1.5
2,142,149	+		LRK54_RS09815	0.63	+0.1
2,142,149	+		LRK54_RS09815	0.63	-0.4
2,142,149	+		LRK54_RS09815	0.63	-0.9
2,142,150	-		LRK54_RS09815	0.63	+0.2
2,142,150	-		LRK54_RS09815	0.63	-0.0
2,142,150	-		LRK54_RS09815	0.63	+0.3
2,142,150	-		LRK54_RS09815	0.63	-0.8
2,142,150	-		LRK54_RS09815	0.63	-0.4
2,142,150	-		LRK54_RS09815	0.63	+0.7
2,142,150	-		LRK54_RS09815	0.63	-1.7
2,142,150	-		LRK54_RS09815	0.63	+0.1
2,142,150	-		LRK54_RS09815	0.63	+0.0
2,142,150	-		LRK54_RS09815	0.63	+0.8
2,142,150	-		LRK54_RS09815	0.63	+0.0
2,142,150	-		LRK54_RS09815	0.63	+0.4
2,142,314	+		LRK54_RS09815	0.72	-0.7
2,142,314	+		LRK54_RS09815	0.72	+0.7
2,142,314	+		LRK54_RS09815	0.72	+0.3
2,142,314	+		LRK54_RS09815	0.72	-0.4
2,142,314	+		LRK54_RS09815	0.72	+1.2
2,142,315	-		LRK54_RS09815	0.73	-2.6
2,142,315	-		LRK54_RS09815	0.73	+1.6
2,142,315	-		LRK54_RS09815	0.73	+2.6
2,142,315	-		LRK54_RS09815	0.73	-1.0
2,142,315	-		LRK54_RS09815	0.73	-2.3
2,142,632	+				+0.5
2,142,632	+				-0.4
2,142,632	+				-1.1
2,142,632	+				+0.8
2,142,632	+				-0.5
2,142,632	+				-0.3
2,142,632	+				-1.9
2,142,633	-				-0.4
2,142,633	-				-0.6
2,142,633	-				-0.4
2,142,633	-				-0.1
2,142,855	+				+0.7
2,142,855	+				-1.6
2,142,855	+				+0.0
2,142,856	-				-1.0
2,142,856	-				+2.0
2,142,856	-				-0.6
2,142,923	+				+0.2
2,142,923	+				-0.7
2,142,923	+				-0.6
2,142,923	+				+0.5
2,142,923	+				+2.3
2,142,923	+				-0.1
2,142,923	+				-1.6
2,142,923	+				-1.4
2,142,923	+				+1.4
2,142,923	+				-0.9
2,142,923	+				-1.3
2,142,923	+				+0.0
2,142,924	-				+1.4
2,142,924	-				-0.8
2,142,924	-				-1.0
2,142,924	-				-0.0
2,142,924	-				-1.4
2,142,924	-				+0.5
2,142,924	-				-0.2
2,142,924	-				-0.5
2,142,924	-				-0.4
2,142,924	-				-0.7
2,142,995	+				+0.3
2,142,995	+				+0.7
2,142,995	+				-1.2
2,142,995	+				-0.7
2,142,995	+				-0.4
2,142,995	+				+1.0
2,142,996	-				-0.2
2,142,996	-				+0.4
2,142,996	-				+1.3
2,142,996	-				-0.6
2,142,996	-				-0.4
2,142,996	-				+0.0
2,142,996	-				+0.3
2,143,049	+		LRK54_RS09820	0.14	-0.7
2,143,049	+		LRK54_RS09820	0.14	-0.5
2,143,050	-		LRK54_RS09820	0.14	+0.0
2,143,050	-		LRK54_RS09820	0.14	-0.1
2,143,050	-		LRK54_RS09820	0.14	-0.3
2,143,050	-		LRK54_RS09820	0.14	+1.6
2,143,050	-		LRK54_RS09820	0.14	-0.6
2,143,050	-		LRK54_RS09820	0.14	-0.5
2,143,050	-		LRK54_RS09820	0.14	-1.2
2,143,097	+		LRK54_RS09820	0.18	-1.6
2,143,097	+		LRK54_RS09820	0.18	+0.2
2,143,097	+		LRK54_RS09820	0.18	-0.7
2,143,097	+		LRK54_RS09820	0.18	-1.5
2,143,097	+		LRK54_RS09820	0.18	-0.7
2,143,097	+		LRK54_RS09820	0.18	+0.8
2,143,098	-		LRK54_RS09820	0.18	+0.3
2,143,098	-		LRK54_RS09820	0.18	+0.1
2,143,098	-		LRK54_RS09820	0.18	-0.6
2,143,098	-		LRK54_RS09820	0.18	-2.8
2,143,160	+		LRK54_RS09820	0.24	-0.1
2,143,160	+		LRK54_RS09820	0.24	+0.3
2,143,160	+		LRK54_RS09820	0.24	+2.9
2,143,160	+		LRK54_RS09820	0.24	-1.2
2,143,160	+		LRK54_RS09820	0.24	-0.7
2,143,160	+		LRK54_RS09820	0.24	-1.4
2,143,160	+		LRK54_RS09820	0.24	+0.0
2,143,160	+		LRK54_RS09820	0.24	-2.2
2,143,160	+		LRK54_RS09820	0.24	+0.6
2,143,160	+		LRK54_RS09820	0.24	-0.4
2,143,160	+		LRK54_RS09820	0.24	-0.5
2,143,160	+		LRK54_RS09820	0.24	-2.1
2,143,160	+		LRK54_RS09820	0.24	-0.8
2,143,161	-		LRK54_RS09820	0.24	-0.2
2,143,161	-		LRK54_RS09820	0.24	-1.5
2,143,161	-		LRK54_RS09820	0.24	-1.2
2,143,161	-		LRK54_RS09820	0.24	-1.7
2,143,161	-		LRK54_RS09820	0.24	-0.9
2,143,161	-		LRK54_RS09820	0.24	-0.9
2,143,161	-		LRK54_RS09820	0.24	+0.7
2,143,161	-		LRK54_RS09820	0.24	+1.9
2,143,161	-		LRK54_RS09820	0.24	-0.6
2,143,161	-		LRK54_RS09820	0.24	+1.6
2,143,161	-		LRK54_RS09820	0.24	-0.4
2,143,161	-		LRK54_RS09820	0.24	+1.6
2,143,161	-		LRK54_RS09820	0.24	-0.8
2,143,352	+		LRK54_RS09820	0.41	-0.6
2,143,352	+		LRK54_RS09820	0.41	-0.3
2,143,352	+		LRK54_RS09820	0.41	+0.6
2,143,352	+		LRK54_RS09820	0.41	+0.1
2,143,352	+		LRK54_RS09820	0.41	+0.1
2,143,352	+		LRK54_RS09820	0.41	+0.3
2,143,352	+		LRK54_RS09820	0.41	+0.8
2,143,352	+		LRK54_RS09820	0.41	-1.4
2,143,353	-		LRK54_RS09820	0.41	-1.1
2,143,353	-		LRK54_RS09820	0.41	+0.0
2,143,353	-		LRK54_RS09820	0.41	+1.6
2,143,353	-		LRK54_RS09820	0.41	-1.3
2,143,353	-		LRK54_RS09820	0.41	+0.6
2,143,353	-		LRK54_RS09820	0.41	+0.9
2,143,353	-		LRK54_RS09820	0.41	-0.1
2,143,478	+		LRK54_RS09820	0.52	+0.4
2,143,478	+		LRK54_RS09820	0.52	+0.0
2,143,478	+		LRK54_RS09820	0.52	-0.4
2,143,478	+		LRK54_RS09820	0.52	+1.4
2,143,478	+		LRK54_RS09820	0.52	-1.2
2,143,478	+		LRK54_RS09820	0.52	+1.6
2,143,478	+		LRK54_RS09820	0.52	-0.7
2,143,478	+		LRK54_RS09820	0.52	-0.4
2,143,478	+		LRK54_RS09820	0.52	-1.0
2,143,478	+		LRK54_RS09820	0.52	-1.1
2,143,479	-		LRK54_RS09820	0.52	-0.4
2,143,479	-		LRK54_RS09820	0.52	-1.4
2,143,479	-		LRK54_RS09820	0.52	+0.0
2,143,479	-		LRK54_RS09820	0.52	+2.2
2,143,479	-		LRK54_RS09820	0.52	-2.9
2,143,479	-		LRK54_RS09820	0.52	-0.7
2,143,479	-		LRK54_RS09820	0.52	-0.6
2,143,479	-		LRK54_RS09820	0.52	-2.0
2,143,479	-		LRK54_RS09820	0.52	-2.3
2,143,479	-		LRK54_RS09820	0.52	-0.4
2,143,479	-		LRK54_RS09820	0.52	+1.6
2,143,479	-		LRK54_RS09820	0.52	-0.9
2,143,479	-		LRK54_RS09820	0.52	+0.6
2,143,479	-		LRK54_RS09820	0.52	+0.1
2,143,479	-		LRK54_RS09820	0.52	-0.3
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	-0.3
2,143,799	+		LRK54_RS09820	0.81	-0.7
2,143,799	+		LRK54_RS09820	0.81	-1.0
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	+1.1
2,143,799	+		LRK54_RS09820	0.81	+1.0
2,143,799	+		LRK54_RS09820	0.81	-0.7
2,143,799	+		LRK54_RS09820	0.81	+0.3
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	+0.2
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	+0.3
2,143,799	+		LRK54_RS09820	0.81	-2.5
2,143,799	+		LRK54_RS09820	0.81	-2.1
2,143,799	+		LRK54_RS09820	0.81	+0.4
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	+0.9
2,143,799	+		LRK54_RS09820	0.81	+0.2
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-1.5
2,143,799	+		LRK54_RS09820	0.81	-0.9
2,143,799	+		LRK54_RS09820	0.81	+1.8
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-0.6
2,143,799	+		LRK54_RS09820	0.81	-0.5
2,143,799	+		LRK54_RS09820	0.81	-1.7
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	-1.2
2,143,799	+		LRK54_RS09820	0.81	-0.8
2,143,799	+		LRK54_RS09820	0.81	-0.6
2,143,799	+		LRK54_RS09820	0.81	+0.7
2,143,799	+		LRK54_RS09820	0.81	-1.4
2,143,799	+		LRK54_RS09820	0.81	-1.2
2,143,799	+		LRK54_RS09820	0.81	+0.1
2,143,799	+		LRK54_RS09820	0.81	-0.8
2,143,799	+		LRK54_RS09820	0.81	+0.4
2,143,799	+		LRK54_RS09820	0.81	-0.1
2,143,799	+		LRK54_RS09820	0.81	-1.4
2,143,799	+		LRK54_RS09820	0.81	+1.6
2,143,799	+		LRK54_RS09820	0.81	-0.4
2,143,799	+		LRK54_RS09820	0.81	-0.7
2,143,799	+		LRK54_RS09820	0.81	+2.6
2,143,799	+		LRK54_RS09820	0.81	-0.9
2,143,799	+		LRK54_RS09820	0.81	-0.8
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-0.6
2,143,800	-		LRK54_RS09820	0.81	-2.1
2,143,800	-		LRK54_RS09820	0.81	+0.3
2,143,800	-		LRK54_RS09820	0.81	+1.0
2,143,800	-		LRK54_RS09820	0.81	-0.9
2,143,800	-		LRK54_RS09820	0.81	-1.1
2,143,800	-		LRK54_RS09820	0.81	-2.0
2,143,800	-		LRK54_RS09820	0.81	-1.8
2,143,800	-		LRK54_RS09820	0.81	+2.6
2,143,800	-		LRK54_RS09820	0.81	-0.4
2,143,800	-		LRK54_RS09820	0.81	-0.4
2,143,800	-		LRK54_RS09820	0.81	+0.2
2,143,800	-		LRK54_RS09820	0.81	-1.1
2,143,800	-		LRK54_RS09820	0.81	-1.4
2,143,800	-		LRK54_RS09820	0.81	+0.6
2,143,800	-		LRK54_RS09820	0.81	-2.7
2,143,800	-		LRK54_RS09820	0.81	-0.2
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-0.8
2,143,800	-		LRK54_RS09820	0.81	-0.0
2,143,800	-		LRK54_RS09820	0.81	-1.8
2,143,800	-		LRK54_RS09820	0.81	-1.4
2,143,800	-		LRK54_RS09820	0.81	-0.7
2,143,800	-		LRK54_RS09820	0.81	+0.1
2,143,800	-		LRK54_RS09820	0.81	-1.6
2,143,800	-		LRK54_RS09820	0.81	-1.9
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-1.1
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-0.7
2,143,800	-		LRK54_RS09820	0.81	-0.1
2,143,800	-		LRK54_RS09820	0.81	-0.2
2,143,800	-		LRK54_RS09820	0.81	-1.2
2,143,800	-		LRK54_RS09820	0.81	-2.0
2,143,800	-		LRK54_RS09820	0.81	+0.9
2,143,800	-		LRK54_RS09820	0.81	-0.9
2,143,800	-		LRK54_RS09820	0.81	+0.5
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-0.6
2,143,800	-		LRK54_RS09820	0.81	-1.2
2,143,976	+				-1.9
2,143,976	+				+0.9
2,143,976	+				+0.0
2,143,977	-				-0.5
2,144,197	-		LRK54_RS09825	0.21	+0.1
2,144,197	-		LRK54_RS09825	0.21	+1.0
2,144,353	+		LRK54_RS09825	0.44	-0.7
2,144,353	+		LRK54_RS09825	0.44	+1.2
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-0.7
2,144,353	+		LRK54_RS09825	0.44	+0.7
2,144,353	+		LRK54_RS09825	0.44	-0.3
2,144,353	+		LRK54_RS09825	0.44	-1.3
2,144,353	+		LRK54_RS09825	0.44	+0.3
2,144,353	+		LRK54_RS09825	0.44	+0.0
2,144,353	+		LRK54_RS09825	0.44	-1.5
2,144,353	+		LRK54_RS09825	0.44	-0.4
2,144,353	+		LRK54_RS09825	0.44	-1.0
2,144,353	+		LRK54_RS09825	0.44	-1.7
2,144,353	+		LRK54_RS09825	0.44	-0.6
2,144,353	+		LRK54_RS09825	0.44	-1.1
2,144,353	+		LRK54_RS09825	0.44	-0.7
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-0.4
2,144,353	+		LRK54_RS09825	0.44	-1.7
2,144,353	+		LRK54_RS09825	0.44	-1.2
2,144,353	+		LRK54_RS09825	0.44	+0.2
2,144,354	-		LRK54_RS09825	0.44	-0.3
2,144,354	-		LRK54_RS09825	0.44	-1.1
2,144,354	-		LRK54_RS09825	0.44	-1.5
2,144,354	-		LRK54_RS09825	0.44	+0.9
2,144,354	-		LRK54_RS09825	0.44	-0.8
2,144,354	-		LRK54_RS09825	0.44	-2.1
2,144,354	-		LRK54_RS09825	0.44	-1.3
2,144,354	-		LRK54_RS09825	0.44	-0.7
2,144,354	-		LRK54_RS09825	0.44	-0.0
2,144,354	-		LRK54_RS09825	0.44	-1.2
2,144,354	-		LRK54_RS09825	0.44	-1.1
2,144,354	-		LRK54_RS09825	0.44	+0.0
2,144,354	-		LRK54_RS09825	0.44	+1.4
2,144,354	-		LRK54_RS09825	0.44	+0.1
2,144,354	-		LRK54_RS09825	0.44	-0.8
2,144,354	-		LRK54_RS09825	0.44	-1.3
2,144,354	-		LRK54_RS09825	0.44	+0.0
2,144,354	-		LRK54_RS09825	0.44	+0.1
2,144,461	+		LRK54_RS09825	0.60	-0.7
2,144,461	+		LRK54_RS09825	0.60	-0.2
2,144,461	+		LRK54_RS09825	0.60	+0.2
2,144,461	+		LRK54_RS09825	0.60	-0.4
2,144,461	+		LRK54_RS09825	0.60	-0.7
2,144,461	+		LRK54_RS09825	0.60	-1.0
2,144,461	+		LRK54_RS09825	0.60	+0.3
2,144,461	+		LRK54_RS09825	0.60	-0.7
2,144,461	+		LRK54_RS09825	0.60	-1.3
2,144,461	+		LRK54_RS09825	0.60	-1.3
2,144,461	+		LRK54_RS09825	0.60	-1.0
2,144,461	+		LRK54_RS09825	0.60	+1.6
2,144,461	+		LRK54_RS09825	0.60	-0.3
2,144,461	+		LRK54_RS09825	0.60	-0.1
2,144,462	-		LRK54_RS09825	0.60	-1.1
2,144,462	-		LRK54_RS09825	0.60	+0.9
2,144,462	-		LRK54_RS09825	0.60	-0.2
2,144,462	-		LRK54_RS09825	0.60	+0.3
2,144,462	-		LRK54_RS09825	0.60	-0.6
2,144,462	-		LRK54_RS09825	0.60	-1.9
2,144,462	-		LRK54_RS09825	0.60	+0.4
2,144,462	-		LRK54_RS09825	0.60	+1.3
2,144,462	-		LRK54_RS09825	0.60	+0.1
2,144,462	-		LRK54_RS09825	0.60	-1.2
2,144,462	-		LRK54_RS09825	0.60	-0.4
2,144,462	-		LRK54_RS09825	0.60	+0.0
2,144,750	+				-2.1
2,144,751	-				+0.6
2,144,751	-				-1.1
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2,144,940	+		LRK54_RS09830	0.26	+0.8
2,144,940	+		LRK54_RS09830	0.26	+0.0
2,144,940	+		LRK54_RS09830	0.26	-0.3
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2,144,940	+		LRK54_RS09830	0.26	+0.0
2,144,940	+		LRK54_RS09830	0.26	+2.0
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2,144,941	-		LRK54_RS09830	0.26	-0.0
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2,144,941	-		LRK54_RS09830	0.26	-1.1
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2,144,941	-		LRK54_RS09830	0.26	-0.5
2,144,941	-		LRK54_RS09830	0.26	+0.4
2,144,941	-		LRK54_RS09830	0.26	-1.4
2,144,941	-		LRK54_RS09830	0.26	+1.8
2,144,941	-		LRK54_RS09830	0.26	+0.9
2,144,941	-		LRK54_RS09830	0.26	-0.7
2,144,941	-		LRK54_RS09830	0.26	+1.2
2,144,941	-		LRK54_RS09830	0.26	-0.4
2,144,994	+		LRK54_RS09830	0.35	+0.0