Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03977

Experiment: LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03976 and MPMX20_03977 are separated by 271 nucleotidesMPMX20_03977 and MPMX20_03978 are separated by 0 nucleotidesMPMX20_03978 and MPMX20_03979 are separated by 146 nucleotides MPMX20_03976: MPMX20_03976 - hypothetical protein, at 4,170,331 to 4,170,906 _03976 MPMX20_03977: MPMX20_03977 - hypothetical protein, at 4,171,178 to 4,172,347 _03977 MPMX20_03978: MPMX20_03978 - NADPH-dependent ferric-chelate reductase, at 4,172,348 to 4,173,112 _03978 MPMX20_03979: MPMX20_03979 - Transcriptional regulator YqjI, at 4,173,259 to 4,173,753 _03979 Position (kb) 4171 4172 4173Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 4170.885 kb on + strandat 4170.905 kb on - strandat 4170.913 kb on + strandat 4170.948 kb on + strandat 4170.962 kb on + strandat 4170.962 kb on + strandat 4170.962 kb on + strandat 4170.970 kb on - strandat 4170.975 kb on + strandat 4171.048 kb on + strandat 4171.083 kb on - strandat 4171.132 kb on + strandat 4171.172 kb on + strandat 4171.239 kb on + strandat 4171.484 kb on - strand, within MPMX20_03977at 4171.519 kb on + strand, within MPMX20_03977at 4171.540 kb on + strand, within MPMX20_03977at 4171.591 kb on + strand, within MPMX20_03977at 4171.675 kb on - strand, within MPMX20_03977at 4171.793 kb on + strand, within MPMX20_03977at 4171.910 kb on - strand, within MPMX20_03977at 4171.922 kb on + strand, within MPMX20_03977at 4171.955 kb on - strand, within MPMX20_03977at 4171.966 kb on - strand, within MPMX20_03977at 4171.970 kb on + strand, within MPMX20_03977at 4171.971 kb on + strand, within MPMX20_03977at 4172.053 kb on + strand, within MPMX20_03977at 4172.089 kb on + strand, within MPMX20_03977at 4172.094 kb on + strand, within MPMX20_03977at 4172.173 kb on + strand, within MPMX20_03977at 4172.173 kb on + strand, within MPMX20_03977at 4172.218 kb on + strand, within MPMX20_03977at 4172.238 kb on - strandat 4172.309 kb on + strandat 4172.327 kb on + strandat 4172.335 kb on - strandat 4172.504 kb on - strand, within MPMX20_03978at 4172.537 kb on - strand, within MPMX20_03978at 4172.567 kb on + strand, within MPMX20_03978at 4172.597 kb on - strand, within MPMX20_03978at 4172.687 kb on + strand, within MPMX20_03978at 4172.689 kb on - strand, within MPMX20_03978at 4172.690 kb on - strand, within MPMX20_03978at 4172.765 kb on - strand, within MPMX20_03978at 4172.821 kb on + strand, within MPMX20_03978at 4172.840 kb on + strand, within MPMX20_03978at 4172.840 kb on + strand, within MPMX20_03978at 4172.840 kb on + strand, within MPMX20_03978at 4172.847 kb on + strand, within MPMX20_03978at 4172.847 kb on + strand, within MPMX20_03978at 4172.847 kb on + strand, within MPMX20_03978at 4172.847 kb on + strand, within MPMX20_03978at 4172.848 kb on - strand, within MPMX20_03978at 4172.855 kb on - strand, within MPMX20_03978at 4172.855 kb on - strand, within MPMX20_03978at 4172.917 kb on + strand, within MPMX20_03978at 4172.922 kb on - strand, within MPMX20_03978at 4173.027 kb on + strand, within MPMX20_03978at 4173.091 kb on - strandat 4173.094 kb on + strandat 4173.114 kb on + strandat 4173.116 kb on - strandat 4173.121 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102
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4,170,885 + -1.5
4,170,905 - -2.4
4,170,913 + -1.5
4,170,948 + -0.3
4,170,962 + -4.2
4,170,962 + -1.3
4,170,962 + +1.1
4,170,970 - +0.8
4,170,975 + -1.8
4,171,048 + +0.0
4,171,083 - +1.0
4,171,132 + -0.7
4,171,172 + +0.0
4,171,239 + -1.4
4,171,484 - MPMX20_03977 0.26 -2.3
4,171,519 + MPMX20_03977 0.29 -3.0
4,171,540 + MPMX20_03977 0.31 -0.4
4,171,591 + MPMX20_03977 0.35 -1.0
4,171,675 - MPMX20_03977 0.42 +0.4
4,171,793 + MPMX20_03977 0.53 +1.0
4,171,910 - MPMX20_03977 0.63 +2.6
4,171,922 + MPMX20_03977 0.64 -0.5
4,171,955 - MPMX20_03977 0.66 -2.1
4,171,966 - MPMX20_03977 0.67 -0.4
4,171,970 + MPMX20_03977 0.68 -2.0
4,171,971 + MPMX20_03977 0.68 +2.0
4,172,053 + MPMX20_03977 0.75 +2.1
4,172,089 + MPMX20_03977 0.78 +0.2
4,172,094 + MPMX20_03977 0.78 +3.0
4,172,173 + MPMX20_03977 0.85 +3.4
4,172,173 + MPMX20_03977 0.85 -1.2
4,172,218 + MPMX20_03977 0.89 -0.2
4,172,238 - +1.4
4,172,309 + +0.7
4,172,327 + +1.0
4,172,335 - -2.1
4,172,504 - MPMX20_03978 0.20 -2.0
4,172,537 - MPMX20_03978 0.25 -2.1
4,172,567 + MPMX20_03978 0.29 -1.4
4,172,597 - MPMX20_03978 0.33 -3.7
4,172,687 + MPMX20_03978 0.44 +1.2
4,172,689 - MPMX20_03978 0.45 -1.6
4,172,690 - MPMX20_03978 0.45 +1.1
4,172,765 - MPMX20_03978 0.55 -1.8
4,172,821 + MPMX20_03978 0.62 -0.4
4,172,840 + MPMX20_03978 0.64 +3.1
4,172,840 + MPMX20_03978 0.64 +0.3
4,172,840 + MPMX20_03978 0.64 +2.3
4,172,847 + MPMX20_03978 0.65 -0.6
4,172,847 + MPMX20_03978 0.65 -3.1
4,172,847 + MPMX20_03978 0.65 +1.0
4,172,847 + MPMX20_03978 0.65 -2.0
4,172,848 - MPMX20_03978 0.65 +2.2
4,172,855 - MPMX20_03978 0.66 +5.3
4,172,855 - MPMX20_03978 0.66 +0.4
4,172,917 + MPMX20_03978 0.74 +0.4
4,172,922 - MPMX20_03978 0.75 -3.5
4,173,027 + MPMX20_03978 0.89 -0.0
4,173,091 - -3.4
4,173,094 + +0.8
4,173,114 + +0.2
4,173,116 - +1.4
4,173,121 - +3.4

Or see this region's nucleotide sequence