Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03841

Experiment: LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03839 and MPMX20_03840 overlap by 4 nucleotidesMPMX20_03840 and MPMX20_03841 are separated by 65 nucleotidesMPMX20_03841 and MPMX20_03842 are separated by 213 nucleotides MPMX20_03839: MPMX20_03839 - Poly-beta-1,6-N-acetyl-D-glucosamine synthase, at 4,044,329 to 4,045,660 _03839 MPMX20_03840: MPMX20_03840 - hypothetical protein, at 4,045,657 to 4,046,088 _03840 MPMX20_03841: MPMX20_03841 - Bifunctional glutathionylspermidine synthetase/amidase, at 4,046,154 to 4,048,016 _03841 MPMX20_03842: MPMX20_03842 - Disulfide-bond oxidoreductase YghU, at 4,048,230 to 4,049,099 _03842 Position (kb) 4046 4047 4048 4049Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4045.159 kb on + strand, within MPMX20_03839at 4045.169 kb on - strand, within MPMX20_03839at 4045.190 kb on + strand, within MPMX20_03839at 4045.191 kb on - strand, within MPMX20_03839at 4045.217 kb on + strand, within MPMX20_03839at 4045.217 kb on + strand, within MPMX20_03839at 4045.217 kb on + strand, within MPMX20_03839at 4045.217 kb on + strand, within MPMX20_03839at 4045.225 kb on - strand, within MPMX20_03839at 4045.227 kb on + strand, within MPMX20_03839at 4045.230 kb on - strand, within MPMX20_03839at 4045.235 kb on - strand, within MPMX20_03839at 4045.432 kb on + strand, within MPMX20_03839at 4045.441 kb on + strand, within MPMX20_03839at 4045.525 kb on + strand, within MPMX20_03839at 4045.561 kb on + strandat 4045.594 kb on + strandat 4045.614 kb on - strandat 4045.638 kb on + strandat 4045.717 kb on + strand, within MPMX20_03840at 4045.725 kb on - strand, within MPMX20_03840at 4045.731 kb on + strand, within MPMX20_03840at 4045.760 kb on + strand, within MPMX20_03840at 4045.760 kb on + strand, within MPMX20_03840at 4045.760 kb on + strand, within MPMX20_03840at 4045.791 kb on - strand, within MPMX20_03840at 4045.791 kb on - strand, within MPMX20_03840at 4045.791 kb on - strand, within MPMX20_03840at 4045.832 kb on - strand, within MPMX20_03840at 4045.869 kb on - strand, within MPMX20_03840at 4045.921 kb on - strand, within MPMX20_03840at 4045.959 kb on - strand, within MPMX20_03840at 4045.964 kb on + strand, within MPMX20_03840at 4045.964 kb on + strand, within MPMX20_03840at 4045.964 kb on + strand, within MPMX20_03840at 4045.972 kb on - strand, within MPMX20_03840at 4045.986 kb on - strand, within MPMX20_03840at 4046.020 kb on + strand, within MPMX20_03840at 4046.024 kb on + strand, within MPMX20_03840at 4046.032 kb on - strand, within MPMX20_03840at 4046.053 kb on - strandat 4046.065 kb on - strandat 4046.085 kb on - strandat 4046.090 kb on - strandat 4046.122 kb on + strandat 4046.129 kb on + strandat 4046.178 kb on + strandat 4046.219 kb on - strandat 4046.228 kb on + strandat 4046.268 kb on + strandat 4046.268 kb on + strandat 4046.271 kb on - strandat 4046.276 kb on - strandat 4046.276 kb on - strandat 4046.286 kb on + strandat 4046.298 kb on - strandat 4046.304 kb on + strandat 4046.309 kb on - strandat 4046.392 kb on - strand, within MPMX20_03841at 4046.475 kb on - strand, within MPMX20_03841at 4046.484 kb on - strand, within MPMX20_03841at 4046.575 kb on - strand, within MPMX20_03841at 4046.625 kb on + strand, within MPMX20_03841at 4046.657 kb on + strand, within MPMX20_03841at 4046.665 kb on - strand, within MPMX20_03841at 4046.707 kb on + strand, within MPMX20_03841at 4046.707 kb on + strand, within MPMX20_03841at 4046.715 kb on - strand, within MPMX20_03841at 4046.750 kb on + strand, within MPMX20_03841at 4046.760 kb on - strand, within MPMX20_03841at 4046.764 kb on + strand, within MPMX20_03841at 4046.765 kb on + strand, within MPMX20_03841at 4046.773 kb on - strand, within MPMX20_03841at 4046.841 kb on - strand, within MPMX20_03841at 4046.851 kb on + strand, within MPMX20_03841at 4046.859 kb on - strand, within MPMX20_03841at 4047.035 kb on + strand, within MPMX20_03841at 4047.160 kb on - strand, within MPMX20_03841at 4047.188 kb on + strand, within MPMX20_03841at 4047.192 kb on - strand, within MPMX20_03841at 4047.198 kb on + strand, within MPMX20_03841at 4047.244 kb on + strand, within MPMX20_03841at 4047.267 kb on + strand, within MPMX20_03841at 4047.311 kb on - strand, within MPMX20_03841at 4047.311 kb on - strand, within MPMX20_03841at 4047.358 kb on + strand, within MPMX20_03841at 4047.436 kb on - strand, within MPMX20_03841at 4047.483 kb on + strand, within MPMX20_03841at 4047.483 kb on + strand, within MPMX20_03841at 4047.494 kb on + strand, within MPMX20_03841at 4047.551 kb on + strand, within MPMX20_03841at 4047.559 kb on - strand, within MPMX20_03841at 4047.675 kb on + strand, within MPMX20_03841at 4047.675 kb on + strand, within MPMX20_03841at 4047.675 kb on + strand, within MPMX20_03841at 4047.708 kb on + strand, within MPMX20_03841at 4047.716 kb on - strand, within MPMX20_03841at 4047.760 kb on + strand, within MPMX20_03841at 4047.786 kb on - strand, within MPMX20_03841at 4047.833 kb on + strandat 4047.833 kb on + strandat 4047.849 kb on + strandat 4047.857 kb on - strandat 4047.914 kb on + strandat 4047.914 kb on + strandat 4047.914 kb on + strandat 4047.914 kb on + strandat 4047.922 kb on - strandat 4047.959 kb on + strandat 4047.967 kb on - strandat 4047.976 kb on + strandat 4047.984 kb on - strandat 4047.994 kb on - strandat 4048.014 kb on + strandat 4048.038 kb on + strandat 4048.047 kb on + strandat 4048.151 kb on + strandat 4048.151 kb on - strandat 4048.177 kb on + strandat 4048.190 kb on + strandat 4048.196 kb on + strandat 4048.206 kb on - strandat 4048.223 kb on + strandat 4048.231 kb on - strandat 4048.257 kb on + strandat 4048.370 kb on + strand, within MPMX20_03842at 4048.370 kb on + strand, within MPMX20_03842at 4048.378 kb on - strand, within MPMX20_03842at 4048.378 kb on - strand, within MPMX20_03842at 4048.378 kb on - strand, within MPMX20_03842at 4048.479 kb on + strand, within MPMX20_03842at 4048.479 kb on + strand, within MPMX20_03842at 4048.487 kb on - strand, within MPMX20_03842at 4048.553 kb on + strand, within MPMX20_03842at 4048.553 kb on + strand, within MPMX20_03842at 4048.553 kb on + strand, within MPMX20_03842at 4048.561 kb on - strand, within MPMX20_03842at 4048.561 kb on - strand, within MPMX20_03842at 4048.600 kb on - strand, within MPMX20_03842at 4048.659 kb on + strand, within MPMX20_03842at 4048.747 kb on - strand, within MPMX20_03842at 4048.763 kb on - strand, within MPMX20_03842at 4048.845 kb on - strand, within MPMX20_03842at 4048.850 kb on - strand, within MPMX20_03842at 4048.890 kb on + strand, within MPMX20_03842at 4048.890 kb on + strand, within MPMX20_03842at 4048.898 kb on - strand, within MPMX20_03842at 4048.904 kb on + strand, within MPMX20_03842at 4048.912 kb on - strand, within MPMX20_03842at 4048.983 kb on + strand, within MPMX20_03842

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102
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4,045,159 + MPMX20_03839 0.62 -1.0
4,045,169 - MPMX20_03839 0.63 -1.2
4,045,190 + MPMX20_03839 0.65 -0.3
4,045,191 - MPMX20_03839 0.65 +1.4
4,045,217 + MPMX20_03839 0.67 +0.4
4,045,217 + MPMX20_03839 0.67 +0.8
4,045,217 + MPMX20_03839 0.67 -2.2
4,045,217 + MPMX20_03839 0.67 +0.3
4,045,225 - MPMX20_03839 0.67 -2.2
4,045,227 + MPMX20_03839 0.67 -3.7
4,045,230 - MPMX20_03839 0.68 +0.2
4,045,235 - MPMX20_03839 0.68 +0.4
4,045,432 + MPMX20_03839 0.83 -1.2
4,045,441 + MPMX20_03839 0.83 +0.6
4,045,525 + MPMX20_03839 0.90 -0.6
4,045,561 + +1.7
4,045,594 + -0.5
4,045,614 - -2.4
4,045,638 + +4.1
4,045,717 + MPMX20_03840 0.14 -0.9
4,045,725 - MPMX20_03840 0.16 +0.0
4,045,731 + MPMX20_03840 0.17 -1.5
4,045,760 + MPMX20_03840 0.24 -0.6
4,045,760 + MPMX20_03840 0.24 -2.5
4,045,760 + MPMX20_03840 0.24 +1.2
4,045,791 - MPMX20_03840 0.31 +2.0
4,045,791 - MPMX20_03840 0.31 +1.8
4,045,791 - MPMX20_03840 0.31 +0.7
4,045,832 - MPMX20_03840 0.41 +0.5
4,045,869 - MPMX20_03840 0.49 -0.7
4,045,921 - MPMX20_03840 0.61 +0.6
4,045,959 - MPMX20_03840 0.70 -1.1
4,045,964 + MPMX20_03840 0.71 +1.5
4,045,964 + MPMX20_03840 0.71 +1.1
4,045,964 + MPMX20_03840 0.71 -0.0
4,045,972 - MPMX20_03840 0.73 -1.7
4,045,986 - MPMX20_03840 0.76 +0.6
4,046,020 + MPMX20_03840 0.84 +0.5
4,046,024 + MPMX20_03840 0.85 +2.2
4,046,032 - MPMX20_03840 0.87 +0.6
4,046,053 - -0.1
4,046,065 - -1.7
4,046,085 - +0.7
4,046,090 - -2.2
4,046,122 + +0.7
4,046,129 + -0.3
4,046,178 + +4.2
4,046,219 - -2.0
4,046,228 + -0.1
4,046,268 + -0.7
4,046,268 + -0.5
4,046,271 - -0.0
4,046,276 - -1.5
4,046,276 - -1.1
4,046,286 + -0.7
4,046,298 - -3.0
4,046,304 + -3.4
4,046,309 - -3.3
4,046,392 - MPMX20_03841 0.13 +1.1
4,046,475 - MPMX20_03841 0.17 +1.1
4,046,484 - MPMX20_03841 0.18 -2.2
4,046,575 - MPMX20_03841 0.23 +0.8
4,046,625 + MPMX20_03841 0.25 -0.9
4,046,657 + MPMX20_03841 0.27 +1.2
4,046,665 - MPMX20_03841 0.27 +0.3
4,046,707 + MPMX20_03841 0.30 -0.9
4,046,707 + MPMX20_03841 0.30 -0.8
4,046,715 - MPMX20_03841 0.30 -0.8
4,046,750 + MPMX20_03841 0.32 -0.2
4,046,760 - MPMX20_03841 0.33 +0.2
4,046,764 + MPMX20_03841 0.33 +1.1
4,046,765 + MPMX20_03841 0.33 +1.5
4,046,773 - MPMX20_03841 0.33 -1.9
4,046,841 - MPMX20_03841 0.37 +2.4
4,046,851 + MPMX20_03841 0.37 -1.9
4,046,859 - MPMX20_03841 0.38 +1.2
4,047,035 + MPMX20_03841 0.47 +0.7
4,047,160 - MPMX20_03841 0.54 -1.1
4,047,188 + MPMX20_03841 0.56 -0.0
4,047,192 - MPMX20_03841 0.56 -1.4
4,047,198 + MPMX20_03841 0.56 +0.5
4,047,244 + MPMX20_03841 0.59 +1.7
4,047,267 + MPMX20_03841 0.60 +0.0
4,047,311 - MPMX20_03841 0.62 +1.1
4,047,311 - MPMX20_03841 0.62 +1.1
4,047,358 + MPMX20_03841 0.65 -1.6
4,047,436 - MPMX20_03841 0.69 -1.3
4,047,483 + MPMX20_03841 0.71 -1.2
4,047,483 + MPMX20_03841 0.71 +3.7
4,047,494 + MPMX20_03841 0.72 +0.7
4,047,551 + MPMX20_03841 0.75 -0.3
4,047,559 - MPMX20_03841 0.75 +0.7
4,047,675 + MPMX20_03841 0.82 +1.0
4,047,675 + MPMX20_03841 0.82 +0.8
4,047,675 + MPMX20_03841 0.82 +2.4
4,047,708 + MPMX20_03841 0.83 +0.3
4,047,716 - MPMX20_03841 0.84 -0.7
4,047,760 + MPMX20_03841 0.86 +2.6
4,047,786 - MPMX20_03841 0.88 +0.3
4,047,833 + +2.7
4,047,833 + +0.5
4,047,849 + +1.1
4,047,857 - +1.9
4,047,914 + +2.2
4,047,914 + +2.9
4,047,914 + -0.7
4,047,914 + -0.7
4,047,922 - -2.8
4,047,959 + +0.5
4,047,967 - +0.0
4,047,976 + +0.3
4,047,984 - -1.0
4,047,994 - -1.0
4,048,014 + +2.1
4,048,038 + -1.9
4,048,047 + +1.1
4,048,151 + +0.7
4,048,151 - -0.3
4,048,177 + +1.3
4,048,190 + +2.0
4,048,196 + -0.2
4,048,206 - +0.7
4,048,223 + -2.1
4,048,231 - +0.6
4,048,257 + +3.6
4,048,370 + MPMX20_03842 0.16 -0.6
4,048,370 + MPMX20_03842 0.16 -0.5
4,048,378 - MPMX20_03842 0.17 +2.2
4,048,378 - MPMX20_03842 0.17 +0.2
4,048,378 - MPMX20_03842 0.17 -1.1
4,048,479 + MPMX20_03842 0.29 -2.6
4,048,479 + MPMX20_03842 0.29 -1.9
4,048,487 - MPMX20_03842 0.30 -0.6
4,048,553 + MPMX20_03842 0.37 +0.3
4,048,553 + MPMX20_03842 0.37 +0.8
4,048,553 + MPMX20_03842 0.37 -0.1
4,048,561 - MPMX20_03842 0.38 +2.0
4,048,561 - MPMX20_03842 0.38 -1.9
4,048,600 - MPMX20_03842 0.43 +2.3
4,048,659 + MPMX20_03842 0.49 -0.3
4,048,747 - MPMX20_03842 0.59 -1.3
4,048,763 - MPMX20_03842 0.61 -2.3
4,048,845 - MPMX20_03842 0.71 -0.3
4,048,850 - MPMX20_03842 0.71 -0.3
4,048,890 + MPMX20_03842 0.76 +1.0
4,048,890 + MPMX20_03842 0.76 +1.7
4,048,898 - MPMX20_03842 0.77 -1.8
4,048,904 + MPMX20_03842 0.77 -3.0
4,048,912 - MPMX20_03842 0.78 -1.4
4,048,983 + MPMX20_03842 0.87 -0.4

Or see this region's nucleotide sequence