Experiment: LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03347 and MPMX20_03348 are separated by 3 nucleotides MPMX20_03348 and MPMX20_03349 overlap by 1 nucleotides MPMX20_03349 and MPMX20_03350 are separated by 56 nucleotides MPMX20_03350 and MPMX20_03351 are separated by 203 nucleotides
MPMX20_03347: MPMX20_03347 - Lichenan permease IIC component, at 3,520,021 to 3,521,340
_03347
MPMX20_03348: MPMX20_03348 - N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase, at 3,521,344 to 3,522,300
_03348
MPMX20_03349: MPMX20_03349 - cytosol aminopeptidase, at 3,522,300 to 3,523,721
_03349
MPMX20_03350: MPMX20_03350 - DnaA regulatory inactivator Hda, at 3,523,778 to 3,524,371
_03350
MPMX20_03351: MPMX20_03351 - Uracil permease, at 3,524,575 to 3,525,864
_03351
Position (kb)
3522
3523
3524 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3521.315 kb on + strand at 3521.394 kb on + strand at 3521.458 kb on + strand, within MPMX20_03348 at 3521.475 kb on + strand, within MPMX20_03348 at 3521.483 kb on - strand, within MPMX20_03348 at 3521.677 kb on - strand, within MPMX20_03348 at 3521.680 kb on + strand, within MPMX20_03348 at 3521.689 kb on - strand, within MPMX20_03348 at 3521.733 kb on + strand, within MPMX20_03348 at 3521.744 kb on + strand, within MPMX20_03348 at 3521.744 kb on + strand, within MPMX20_03348 at 3521.764 kb on + strand, within MPMX20_03348 at 3521.765 kb on + strand, within MPMX20_03348 at 3521.772 kb on - strand, within MPMX20_03348 at 3521.772 kb on - strand, within MPMX20_03348 at 3521.773 kb on - strand, within MPMX20_03348 at 3521.900 kb on + strand, within MPMX20_03348 at 3521.938 kb on + strand, within MPMX20_03348 at 3521.961 kb on - strand, within MPMX20_03348 at 3521.962 kb on - strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.121 kb on + strand, within MPMX20_03348 at 3522.144 kb on + strand, within MPMX20_03348 at 3522.253 kb on + strand at 3522.253 kb on + strand at 3522.258 kb on + strand at 3522.258 kb on + strand at 3522.258 kb on + strand at 3522.266 kb on - strand at 3522.266 kb on - strand at 3522.286 kb on + strand at 3522.315 kb on - strand at 3522.315 kb on - strand at 3522.319 kb on + strand at 3522.341 kb on + strand at 3522.349 kb on - strand at 3522.349 kb on - strand at 3522.381 kb on + strand at 3522.499 kb on + strand, within MPMX20_03349 at 3522.502 kb on - strand, within MPMX20_03349 at 3522.537 kb on - strand, within MPMX20_03349 at 3522.561 kb on - strand, within MPMX20_03349 at 3522.561 kb on - strand, within MPMX20_03349 at 3522.564 kb on + strand, within MPMX20_03349 at 3522.631 kb on + strand, within MPMX20_03349 at 3522.639 kb on - strand, within MPMX20_03349 at 3522.639 kb on - strand, within MPMX20_03349 at 3522.707 kb on - strand, within MPMX20_03349 at 3522.717 kb on - strand, within MPMX20_03349 at 3522.849 kb on - strand, within MPMX20_03349 at 3522.880 kb on - strand, within MPMX20_03349 at 3522.911 kb on + strand, within MPMX20_03349 at 3522.911 kb on + strand, within MPMX20_03349 at 3522.921 kb on - strand, within MPMX20_03349 at 3522.950 kb on - strand, within MPMX20_03349 at 3522.977 kb on + strand, within MPMX20_03349 at 3522.983 kb on + strand, within MPMX20_03349 at 3523.023 kb on + strand, within MPMX20_03349 at 3523.023 kb on + strand, within MPMX20_03349 at 3523.055 kb on + strand, within MPMX20_03349 at 3523.068 kb on + strand, within MPMX20_03349 at 3523.076 kb on - strand, within MPMX20_03349 at 3523.084 kb on + strand, within MPMX20_03349 at 3523.117 kb on + strand, within MPMX20_03349 at 3523.127 kb on + strand, within MPMX20_03349 at 3523.219 kb on - strand, within MPMX20_03349 at 3523.219 kb on - strand, within MPMX20_03349 at 3523.311 kb on + strand, within MPMX20_03349 at 3523.377 kb on + strand, within MPMX20_03349 at 3523.466 kb on + strand, within MPMX20_03349 at 3523.466 kb on + strand, within MPMX20_03349 at 3523.467 kb on - strand, within MPMX20_03349 at 3523.467 kb on - strand, within MPMX20_03349 at 3523.467 kb on - strand, within MPMX20_03349 at 3523.474 kb on - strand, within MPMX20_03349 at 3523.519 kb on + strand, within MPMX20_03349 at 3523.527 kb on - strand, within MPMX20_03349 at 3523.529 kb on + strand, within MPMX20_03349 at 3523.529 kb on + strand, within MPMX20_03349 at 3523.529 kb on + strand, within MPMX20_03349 at 3523.529 kb on + strand, within MPMX20_03349 at 3523.537 kb on - strand, within MPMX20_03349 at 3523.616 kb on - strand at 3523.646 kb on - strand at 3523.722 kb on + strand at 3523.730 kb on - strand at 3523.740 kb on + strand at 3524.538 kb on + strand at 3524.543 kb on + strand at 3524.546 kb on - strand at 3524.663 kb on - strand at 3524.664 kb on - strand at 3524.713 kb on + strand, within MPMX20_03351 at 3524.721 kb on + strand, within MPMX20_03351
Per-strain Table
Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Bacillus_subtilis_TBS_102 remove 3,521,315 + -3.1 3,521,394 + -0.0 3,521,458 + MPMX20_03348 0.12 +0.9 3,521,475 + MPMX20_03348 0.14 +0.3 3,521,483 - MPMX20_03348 0.15 -1.1 3,521,677 - MPMX20_03348 0.35 -0.0 3,521,680 + MPMX20_03348 0.35 -0.4 3,521,689 - MPMX20_03348 0.36 +0.9 3,521,733 + MPMX20_03348 0.41 +1.2 3,521,744 + MPMX20_03348 0.42 -1.9 3,521,744 + MPMX20_03348 0.42 -0.6 3,521,764 + MPMX20_03348 0.44 +1.3 3,521,765 + MPMX20_03348 0.44 +1.1 3,521,772 - MPMX20_03348 0.45 +2.6 3,521,772 - MPMX20_03348 0.45 -2.6 3,521,773 - MPMX20_03348 0.45 -1.8 3,521,900 + MPMX20_03348 0.58 -3.3 3,521,938 + MPMX20_03348 0.62 +0.8 3,521,961 - MPMX20_03348 0.64 -1.0 3,521,962 - MPMX20_03348 0.65 -1.2 3,522,009 + MPMX20_03348 0.69 +2.3 3,522,009 + MPMX20_03348 0.69 -2.3 3,522,009 + MPMX20_03348 0.69 -1.7 3,522,121 + MPMX20_03348 0.81 -2.4 3,522,144 + MPMX20_03348 0.84 +0.7 3,522,253 + +1.6 3,522,253 + -0.9 3,522,258 + +0.7 3,522,258 + -2.7 3,522,258 + -0.5 3,522,266 - +0.5 3,522,266 - -1.9 3,522,286 + +0.8 3,522,315 - +0.5 3,522,315 - +0.5 3,522,319 + -1.2 3,522,341 + -0.4 3,522,349 - +0.7 3,522,349 - -0.8 3,522,381 + +0.8 3,522,499 + MPMX20_03349 0.14 +1.3 3,522,502 - MPMX20_03349 0.14 -2.1 3,522,537 - MPMX20_03349 0.17 -1.9 3,522,561 - MPMX20_03349 0.18 +0.9 3,522,561 - MPMX20_03349 0.18 -1.8 3,522,564 + MPMX20_03349 0.19 -1.0 3,522,631 + MPMX20_03349 0.23 -3.0 3,522,639 - MPMX20_03349 0.24 -4.5 3,522,639 - MPMX20_03349 0.24 -2.0 3,522,707 - MPMX20_03349 0.29 -0.1 3,522,717 - MPMX20_03349 0.29 +1.1 3,522,849 - MPMX20_03349 0.39 -1.0 3,522,880 - MPMX20_03349 0.41 -0.5 3,522,911 + MPMX20_03349 0.43 -2.2 3,522,911 + MPMX20_03349 0.43 -0.5 3,522,921 - MPMX20_03349 0.44 -3.0 3,522,950 - MPMX20_03349 0.46 +0.7 3,522,977 + MPMX20_03349 0.48 -1.8 3,522,983 + MPMX20_03349 0.48 -2.0 3,523,023 + MPMX20_03349 0.51 +1.1 3,523,023 + MPMX20_03349 0.51 +0.1 3,523,055 + MPMX20_03349 0.53 +2.4 3,523,068 + MPMX20_03349 0.54 -1.3 3,523,076 - MPMX20_03349 0.55 -0.5 3,523,084 + MPMX20_03349 0.55 -3.2 3,523,117 + MPMX20_03349 0.57 -0.5 3,523,127 + MPMX20_03349 0.58 +1.1 3,523,219 - MPMX20_03349 0.65 -1.8 3,523,219 - MPMX20_03349 0.65 -2.8 3,523,311 + MPMX20_03349 0.71 -1.0 3,523,377 + MPMX20_03349 0.76 -0.8 3,523,466 + MPMX20_03349 0.82 -3.6 3,523,466 + MPMX20_03349 0.82 -1.4 3,523,467 - MPMX20_03349 0.82 +0.8 3,523,467 - MPMX20_03349 0.82 +4.3 3,523,467 - MPMX20_03349 0.82 -1.0 3,523,474 - MPMX20_03349 0.83 -0.9 3,523,519 + MPMX20_03349 0.86 -1.1 3,523,527 - MPMX20_03349 0.86 +0.7 3,523,529 + MPMX20_03349 0.86 +0.5 3,523,529 + MPMX20_03349 0.86 +0.4 3,523,529 + MPMX20_03349 0.86 -2.7 3,523,529 + MPMX20_03349 0.86 -0.3 3,523,537 - MPMX20_03349 0.87 -1.0 3,523,616 - -2.5 3,523,646 - +0.3 3,523,722 + -2.0 3,523,730 - +1.9 3,523,740 + +0.1 3,524,538 + +0.5 3,524,543 + -0.5 3,524,546 - -0.3 3,524,663 - +1.3 3,524,664 - -1.8 3,524,713 + MPMX20_03351 0.11 +0.2 3,524,721 + MPMX20_03351 0.11 -2.3
Or see this region's nucleotide sequence