Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03769

Experiment: LB plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03767 and MPMX20_03768 are separated by 25 nucleotidesMPMX20_03768 and MPMX20_03769 are separated by 161 nucleotidesMPMX20_03769 and MPMX20_03770 are separated by 250 nucleotidesMPMX20_03770 and MPMX20_03771 are separated by 45 nucleotides MPMX20_03767: MPMX20_03767 - Xaa-Pro aminopeptidase, at 3,970,587 to 3,971,906 _03767 MPMX20_03768: MPMX20_03768 - hypothetical protein, at 3,971,932 to 3,972,516 _03768 MPMX20_03769: MPMX20_03769 - Cell division protein ZapA, at 3,972,678 to 3,973,007 _03769 MPMX20_03770: MPMX20_03770 - 5-formyltetrahydrofolate cyclo-ligase, at 3,973,258 to 3,973,854 _03770 MPMX20_03771: MPMX20_03771 - D-3-phosphoglycerate dehydrogenase, at 3,973,900 to 3,975,132 _03771 Position (kb) 3972 3973 3974Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3971.849 kb on - strandat 3971.918 kb on - strandat 3971.923 kb on - strandat 3972.087 kb on - strand, within MPMX20_03768at 3972.090 kb on - strand, within MPMX20_03768at 3972.092 kb on + strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.192 kb on - strand, within MPMX20_03768at 3972.218 kb on + strand, within MPMX20_03768at 3972.233 kb on + strand, within MPMX20_03768at 3972.233 kb on - strand, within MPMX20_03768at 3972.241 kb on - strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.319 kb on - strand, within MPMX20_03768at 3972.319 kb on - strand, within MPMX20_03768at 3972.344 kb on + strand, within MPMX20_03768at 3972.407 kb on + strand, within MPMX20_03768at 3972.407 kb on + strand, within MPMX20_03768at 3972.408 kb on - strand, within MPMX20_03768at 3972.436 kb on + strand, within MPMX20_03768at 3972.436 kb on + strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.566 kb on + strandat 3972.583 kb on + strandat 3972.604 kb on - strandat 3972.638 kb on - strandat 3972.650 kb on - strandat 3972.655 kb on + strandat 3972.672 kb on + strandat 3972.673 kb on - strandat 3972.692 kb on - strandat 3972.749 kb on - strand, within MPMX20_03769at 3972.862 kb on + strand, within MPMX20_03769at 3972.910 kb on + strand, within MPMX20_03769at 3972.910 kb on + strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.953 kb on + strand, within MPMX20_03769at 3972.961 kb on - strand, within MPMX20_03769at 3973.088 kb on - strandat 3973.207 kb on - strandat 3973.342 kb on - strand, within MPMX20_03770at 3973.388 kb on + strand, within MPMX20_03770at 3973.417 kb on + strand, within MPMX20_03770at 3973.470 kb on + strand, within MPMX20_03770at 3973.547 kb on + strand, within MPMX20_03770at 3973.547 kb on + strand, within MPMX20_03770at 3973.555 kb on - strand, within MPMX20_03770at 3973.557 kb on - strand, within MPMX20_03770at 3973.639 kb on + strand, within MPMX20_03770at 3973.762 kb on + strand, within MPMX20_03770at 3973.767 kb on + strand, within MPMX20_03770at 3973.841 kb on - strandat 3973.885 kb on - strandat 3973.885 kb on - strandat 3973.916 kb on - strandat 3973.935 kb on - strandat 3973.938 kb on + strandat 3973.946 kb on - strandat 3973.977 kb on - strandat 3974.003 kb on - strandat 3974.006 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055
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3,971,849 - -3.7
3,971,918 - -1.9
3,971,923 - -0.7
3,972,087 - MPMX20_03768 0.26 -1.4
3,972,090 - MPMX20_03768 0.27 -0.4
3,972,092 + MPMX20_03768 0.27 -1.4
3,972,100 - MPMX20_03768 0.29 -1.1
3,972,100 - MPMX20_03768 0.29 +0.5
3,972,100 - MPMX20_03768 0.29 -2.6
3,972,100 - MPMX20_03768 0.29 -1.7
3,972,192 - MPMX20_03768 0.44 -1.6
3,972,218 + MPMX20_03768 0.49 -3.3
3,972,233 + MPMX20_03768 0.51 +0.8
3,972,233 - MPMX20_03768 0.51 +1.1
3,972,241 - MPMX20_03768 0.53 -0.9
3,972,311 + MPMX20_03768 0.65 -0.6
3,972,311 + MPMX20_03768 0.65 -1.7
3,972,311 + MPMX20_03768 0.65 +0.5
3,972,319 - MPMX20_03768 0.66 -1.6
3,972,319 - MPMX20_03768 0.66 -0.0
3,972,344 + MPMX20_03768 0.70 -0.6
3,972,407 + MPMX20_03768 0.81 -1.6
3,972,407 + MPMX20_03768 0.81 +0.9
3,972,408 - MPMX20_03768 0.81 +0.2
3,972,436 + MPMX20_03768 0.86 -0.3
3,972,436 + MPMX20_03768 0.86 -0.9
3,972,444 - MPMX20_03768 0.88 -2.0
3,972,444 - MPMX20_03768 0.88 -0.4
3,972,444 - MPMX20_03768 0.88 +0.3
3,972,444 - MPMX20_03768 0.88 +2.8
3,972,444 - MPMX20_03768 0.88 -0.7
3,972,501 + -1.2
3,972,501 + +1.3
3,972,501 + -2.4
3,972,501 + -1.3
3,972,501 + +0.5
3,972,501 + -1.3
3,972,501 + -1.5
3,972,501 + -0.4
3,972,501 + -0.7
3,972,501 + +0.0
3,972,501 + -0.6
3,972,501 + -2.4
3,972,501 + +0.3
3,972,501 + -3.1
3,972,501 + -1.4
3,972,501 + -1.1
3,972,501 + -0.1
3,972,509 - +0.1
3,972,509 - -1.5
3,972,509 - -2.0
3,972,509 - +0.8
3,972,509 - +1.0
3,972,509 - +3.4
3,972,509 - -0.9
3,972,566 + -1.8
3,972,583 + -0.5
3,972,604 - -1.0
3,972,638 - -2.4
3,972,650 - -0.5
3,972,655 + +0.5
3,972,672 + -0.7
3,972,673 - -0.7
3,972,692 - +0.2
3,972,749 - MPMX20_03769 0.22 -3.8
3,972,862 + MPMX20_03769 0.56 +0.3
3,972,910 + MPMX20_03769 0.70 -2.4
3,972,910 + MPMX20_03769 0.70 -4.0
3,972,918 - MPMX20_03769 0.73 -2.6
3,972,918 - MPMX20_03769 0.73 -0.7
3,972,953 + MPMX20_03769 0.83 +0.5
3,972,961 - MPMX20_03769 0.86 -2.3
3,973,088 - -3.4
3,973,207 - -1.5
3,973,342 - MPMX20_03770 0.14 -2.3
3,973,388 + MPMX20_03770 0.22 +0.7
3,973,417 + MPMX20_03770 0.27 +0.8
3,973,470 + MPMX20_03770 0.36 -1.0
3,973,547 + MPMX20_03770 0.48 +1.4
3,973,547 + MPMX20_03770 0.48 +0.5
3,973,555 - MPMX20_03770 0.50 -0.1
3,973,557 - MPMX20_03770 0.50 -1.6
3,973,639 + MPMX20_03770 0.64 +0.5
3,973,762 + MPMX20_03770 0.84 -1.6
3,973,767 + MPMX20_03770 0.85 -3.7
3,973,841 - -2.1
3,973,885 - -0.0
3,973,885 - -1.3
3,973,916 - -0.7
3,973,935 - -1.4
3,973,938 + -2.6
3,973,946 - -1.0
3,973,977 - -2.7
3,974,003 - +0.7
3,974,006 + +0.5

Or see this region's nucleotide sequence