Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03065

Experiment: TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03064 and MPMX20_03065 overlap by 4 nucleotidesMPMX20_03065 and MPMX20_03066 are separated by 135 nucleotidesMPMX20_03066 and MPMX20_03067 are separated by 154 nucleotides MPMX20_03064: MPMX20_03064 - Signal transduction histidine-protein kinase BaeS, at 3,213,496 to 3,214,899 _03064 MPMX20_03065: MPMX20_03065 - Transcriptional regulatory protein BaeR, at 3,214,896 to 3,215,618 _03065 MPMX20_03066: MPMX20_03066 - hypothetical protein, at 3,215,754 to 3,216,086 _03066 MPMX20_03067: MPMX20_03067 - 23S rRNA 5-hydroxycytidine synthase, at 3,216,241 to 3,217,602 _03067 Position (kb) 3214 3215 3216Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3213.908 kb on - strand, within MPMX20_03064at 3214.010 kb on + strand, within MPMX20_03064at 3214.020 kb on - strand, within MPMX20_03064at 3214.071 kb on + strand, within MPMX20_03064at 3214.136 kb on + strand, within MPMX20_03064at 3214.172 kb on + strand, within MPMX20_03064at 3214.172 kb on + strand, within MPMX20_03064at 3214.180 kb on - strand, within MPMX20_03064at 3214.180 kb on - strand, within MPMX20_03064at 3214.185 kb on + strand, within MPMX20_03064at 3214.291 kb on + strand, within MPMX20_03064at 3214.291 kb on + strand, within MPMX20_03064at 3214.299 kb on - strand, within MPMX20_03064at 3214.311 kb on + strand, within MPMX20_03064at 3214.349 kb on - strand, within MPMX20_03064at 3214.359 kb on + strand, within MPMX20_03064at 3214.359 kb on + strand, within MPMX20_03064at 3214.376 kb on + strand, within MPMX20_03064at 3214.376 kb on + strand, within MPMX20_03064at 3214.384 kb on - strand, within MPMX20_03064at 3214.384 kb on - strand, within MPMX20_03064at 3214.418 kb on + strand, within MPMX20_03064at 3214.516 kb on + strand, within MPMX20_03064at 3214.551 kb on - strand, within MPMX20_03064at 3214.593 kb on + strand, within MPMX20_03064at 3214.593 kb on + strand, within MPMX20_03064at 3214.601 kb on - strand, within MPMX20_03064at 3214.601 kb on - strand, within MPMX20_03064at 3214.620 kb on + strand, within MPMX20_03064at 3214.625 kb on - strand, within MPMX20_03064at 3214.669 kb on - strand, within MPMX20_03064at 3214.671 kb on + strand, within MPMX20_03064at 3214.691 kb on + strand, within MPMX20_03064at 3214.728 kb on + strand, within MPMX20_03064at 3214.827 kb on + strandat 3214.850 kb on + strandat 3214.892 kb on + strandat 3215.002 kb on + strand, within MPMX20_03065at 3215.010 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.129 kb on + strand, within MPMX20_03065at 3215.208 kb on + strand, within MPMX20_03065at 3215.214 kb on - strand, within MPMX20_03065at 3215.228 kb on + strand, within MPMX20_03065at 3215.275 kb on + strand, within MPMX20_03065at 3215.287 kb on + strand, within MPMX20_03065at 3215.429 kb on + strand, within MPMX20_03065at 3215.440 kb on - strand, within MPMX20_03065at 3215.448 kb on + strand, within MPMX20_03065at 3215.456 kb on - strand, within MPMX20_03065at 3215.456 kb on - strand, within MPMX20_03065at 3215.462 kb on + strand, within MPMX20_03065at 3215.482 kb on + strand, within MPMX20_03065at 3215.537 kb on + strand, within MPMX20_03065at 3215.568 kb on + strandat 3215.568 kb on + strandat 3215.576 kb on - strandat 3215.576 kb on - strandat 3215.603 kb on + strandat 3215.611 kb on - strandat 3215.627 kb on - strandat 3215.677 kb on + strandat 3215.795 kb on + strand, within MPMX20_03066at 3215.795 kb on + strand, within MPMX20_03066at 3215.803 kb on - strand, within MPMX20_03066at 3215.808 kb on - strand, within MPMX20_03066at 3215.822 kb on - strand, within MPMX20_03066at 3215.832 kb on + strand, within MPMX20_03066at 3215.832 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066at 3215.932 kb on - strand, within MPMX20_03066at 3215.994 kb on + strand, within MPMX20_03066at 3215.999 kb on + strand, within MPMX20_03066at 3216.007 kb on + strand, within MPMX20_03066at 3216.007 kb on + strand, within MPMX20_03066at 3216.007 kb on - strand, within MPMX20_03066at 3216.023 kb on + strand, within MPMX20_03066at 3216.041 kb on + strand, within MPMX20_03066at 3216.041 kb on + strand, within MPMX20_03066at 3216.067 kb on + strandat 3216.075 kb on + strandat 3216.077 kb on - strandat 3216.102 kb on - strandat 3216.112 kb on - strandat 3216.126 kb on + strandat 3216.163 kb on + strandat 3216.171 kb on - strandat 3216.210 kb on + strandat 3216.210 kb on + strandat 3216.217 kb on + strandat 3216.218 kb on - strandat 3216.218 kb on - strandat 3216.218 kb on - strandat 3216.251 kb on - strandat 3216.403 kb on + strand, within MPMX20_03067at 3216.404 kb on + strand, within MPMX20_03067at 3216.411 kb on - strand, within MPMX20_03067at 3216.412 kb on - strand, within MPMX20_03067at 3216.440 kb on + strand, within MPMX20_03067at 3216.441 kb on - strand, within MPMX20_03067at 3216.594 kb on + strand, within MPMX20_03067at 3216.602 kb on - strand, within MPMX20_03067

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103
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3,213,908 - MPMX20_03064 0.29 -0.3
3,214,010 + MPMX20_03064 0.37 -1.8
3,214,020 - MPMX20_03064 0.37 +1.7
3,214,071 + MPMX20_03064 0.41 -1.1
3,214,136 + MPMX20_03064 0.46 +0.5
3,214,172 + MPMX20_03064 0.48 -0.2
3,214,172 + MPMX20_03064 0.48 +1.0
3,214,180 - MPMX20_03064 0.49 +0.5
3,214,180 - MPMX20_03064 0.49 -1.0
3,214,185 + MPMX20_03064 0.49 +0.2
3,214,291 + MPMX20_03064 0.57 +0.3
3,214,291 + MPMX20_03064 0.57 -3.0
3,214,299 - MPMX20_03064 0.57 -0.3
3,214,311 + MPMX20_03064 0.58 -1.0
3,214,349 - MPMX20_03064 0.61 -1.5
3,214,359 + MPMX20_03064 0.61 -0.9
3,214,359 + MPMX20_03064 0.61 -1.5
3,214,376 + MPMX20_03064 0.63 +0.3
3,214,376 + MPMX20_03064 0.63 -0.6
3,214,384 - MPMX20_03064 0.63 -1.7
3,214,384 - MPMX20_03064 0.63 +1.8
3,214,418 + MPMX20_03064 0.66 +0.3
3,214,516 + MPMX20_03064 0.73 -0.9
3,214,551 - MPMX20_03064 0.75 -1.7
3,214,593 + MPMX20_03064 0.78 +2.7
3,214,593 + MPMX20_03064 0.78 -1.0
3,214,601 - MPMX20_03064 0.79 -0.5
3,214,601 - MPMX20_03064 0.79 -2.7
3,214,620 + MPMX20_03064 0.80 -0.6
3,214,625 - MPMX20_03064 0.80 -0.5
3,214,669 - MPMX20_03064 0.84 -0.2
3,214,671 + MPMX20_03064 0.84 -0.1
3,214,691 + MPMX20_03064 0.85 -2.0
3,214,728 + MPMX20_03064 0.88 +0.6
3,214,827 + +0.8
3,214,850 + -0.8
3,214,892 + -0.5
3,215,002 + MPMX20_03065 0.15 +1.7
3,215,010 - MPMX20_03065 0.16 -2.3
3,215,109 - MPMX20_03065 0.29 +1.4
3,215,109 - MPMX20_03065 0.29 -1.2
3,215,109 - MPMX20_03065 0.29 +1.7
3,215,109 - MPMX20_03065 0.29 -2.0
3,215,109 - MPMX20_03065 0.29 -1.8
3,215,129 + MPMX20_03065 0.32 -0.9
3,215,208 + MPMX20_03065 0.43 -1.1
3,215,214 - MPMX20_03065 0.44 +0.4
3,215,228 + MPMX20_03065 0.46 -1.5
3,215,275 + MPMX20_03065 0.52 -1.5
3,215,287 + MPMX20_03065 0.54 -0.2
3,215,429 + MPMX20_03065 0.74 -1.1
3,215,440 - MPMX20_03065 0.75 -0.1
3,215,448 + MPMX20_03065 0.76 -0.3
3,215,456 - MPMX20_03065 0.77 -1.2
3,215,456 - MPMX20_03065 0.77 +0.5
3,215,462 + MPMX20_03065 0.78 -1.5
3,215,482 + MPMX20_03065 0.81 -0.1
3,215,537 + MPMX20_03065 0.89 -2.3
3,215,568 + -1.3
3,215,568 + -0.1
3,215,576 - +1.3
3,215,576 - -0.1
3,215,603 + -0.2
3,215,611 - -1.8
3,215,627 - -0.4
3,215,677 + -0.8
3,215,795 + MPMX20_03066 0.12 -0.5
3,215,795 + MPMX20_03066 0.12 -0.7
3,215,803 - MPMX20_03066 0.15 -3.2
3,215,808 - MPMX20_03066 0.16 -0.2
3,215,822 - MPMX20_03066 0.20 -1.6
3,215,832 + MPMX20_03066 0.23 -0.5
3,215,832 + MPMX20_03066 0.23 -0.9
3,215,846 + MPMX20_03066 0.28 -1.6
3,215,846 + MPMX20_03066 0.28 -1.9
3,215,846 + MPMX20_03066 0.28 -1.8
3,215,846 + MPMX20_03066 0.28 +0.1
3,215,846 + MPMX20_03066 0.28 +0.4
3,215,854 - MPMX20_03066 0.30 +0.2
3,215,854 - MPMX20_03066 0.30 -0.0
3,215,854 - MPMX20_03066 0.30 +0.4
3,215,932 - MPMX20_03066 0.53 -1.1
3,215,994 + MPMX20_03066 0.72 -0.9
3,215,999 + MPMX20_03066 0.74 -1.6
3,216,007 + MPMX20_03066 0.76 +0.4
3,216,007 + MPMX20_03066 0.76 +0.0
3,216,007 - MPMX20_03066 0.76 +0.4
3,216,023 + MPMX20_03066 0.81 +1.0
3,216,041 + MPMX20_03066 0.86 -1.1
3,216,041 + MPMX20_03066 0.86 -1.1
3,216,067 + -1.6
3,216,075 + -0.9
3,216,077 - +0.9
3,216,102 - -1.0
3,216,112 - +1.6
3,216,126 + +0.1
3,216,163 + +0.5
3,216,171 - +1.5
3,216,210 + +1.1
3,216,210 + +1.1
3,216,217 + -1.3
3,216,218 - +0.1
3,216,218 - +0.1
3,216,218 - -1.0
3,216,251 - +0.5
3,216,403 + MPMX20_03067 0.12 +0.7
3,216,404 + MPMX20_03067 0.12 -2.2
3,216,411 - MPMX20_03067 0.12 +0.4
3,216,412 - MPMX20_03067 0.13 -1.4
3,216,440 + MPMX20_03067 0.15 +1.3
3,216,441 - MPMX20_03067 0.15 -2.0
3,216,594 + MPMX20_03067 0.26 -2.7
3,216,602 - MPMX20_03067 0.27 -2.0

Or see this region's nucleotide sequence