Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00683

Experiment: RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00682 and MPMX20_00683 are separated by 104 nucleotidesMPMX20_00683 and MPMX20_00684 are separated by 46 nucleotidesMPMX20_00684 and MPMX20_00685 are separated by 117 nucleotides MPMX20_00682: MPMX20_00682 - Phosphopentomutase, at 700,861 to 702,084 _00682 MPMX20_00683: MPMX20_00683 - Purine nucleoside phosphorylase DeoD-type, at 702,189 to 702,911 _00683 MPMX20_00684: MPMX20_00684 - Protein GltF, at 702,958 to 703,662 _00684 MPMX20_00685: MPMX20_00685 - hypothetical protein, at 703,780 to 704,349 _00685 Position (kb) 702 703Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 701.282 kb on + strand, within MPMX20_00682at 701.317 kb on - strand, within MPMX20_00682at 701.348 kb on - strand, within MPMX20_00682at 701.369 kb on + strand, within MPMX20_00682at 701.377 kb on - strand, within MPMX20_00682at 701.411 kb on + strand, within MPMX20_00682at 701.427 kb on + strand, within MPMX20_00682at 701.430 kb on + strand, within MPMX20_00682at 701.521 kb on + strand, within MPMX20_00682at 701.575 kb on + strand, within MPMX20_00682at 701.575 kb on + strand, within MPMX20_00682at 701.623 kb on - strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.646 kb on + strand, within MPMX20_00682at 701.654 kb on - strand, within MPMX20_00682at 701.690 kb on + strand, within MPMX20_00682at 701.703 kb on + strand, within MPMX20_00682at 701.722 kb on - strand, within MPMX20_00682at 701.754 kb on - strand, within MPMX20_00682at 701.788 kb on - strand, within MPMX20_00682at 701.791 kb on - strand, within MPMX20_00682at 701.830 kb on - strand, within MPMX20_00682at 701.846 kb on + strand, within MPMX20_00682at 701.914 kb on - strand, within MPMX20_00682at 701.916 kb on + strand, within MPMX20_00682at 701.917 kb on + strand, within MPMX20_00682at 701.922 kb on + strand, within MPMX20_00682at 701.961 kb on + strand, within MPMX20_00682at 701.977 kb on + strandat 702.049 kb on - strandat 702.061 kb on + strandat 702.069 kb on - strandat 702.073 kb on + strandat 702.078 kb on + strandat 702.078 kb on + strandat 702.078 kb on + strandat 702.086 kb on - strandat 702.088 kb on + strandat 702.088 kb on + strandat 702.096 kb on - strandat 702.126 kb on + strandat 702.198 kb on + strandat 702.198 kb on + strandat 702.198 kb on + strandat 702.203 kb on + strandat 702.206 kb on - strandat 702.211 kb on - strandat 702.242 kb on + strandat 702.377 kb on + strand, within MPMX20_00683at 702.377 kb on + strand, within MPMX20_00683at 702.385 kb on - strand, within MPMX20_00683at 702.414 kb on + strand, within MPMX20_00683at 702.456 kb on + strand, within MPMX20_00683at 702.481 kb on + strand, within MPMX20_00683at 702.489 kb on - strand, within MPMX20_00683at 702.489 kb on - strand, within MPMX20_00683at 702.508 kb on + strand, within MPMX20_00683at 702.527 kb on + strand, within MPMX20_00683at 702.555 kb on + strand, within MPMX20_00683at 702.589 kb on - strand, within MPMX20_00683at 702.633 kb on - strand, within MPMX20_00683at 702.633 kb on - strand, within MPMX20_00683at 702.645 kb on + strand, within MPMX20_00683at 702.650 kb on + strand, within MPMX20_00683at 702.655 kb on + strand, within MPMX20_00683at 702.660 kb on + strand, within MPMX20_00683at 702.668 kb on - strand, within MPMX20_00683at 702.673 kb on - strand, within MPMX20_00683at 702.681 kb on - strand, within MPMX20_00683at 702.746 kb on + strand, within MPMX20_00683at 702.914 kb on - strandat 703.112 kb on - strand, within MPMX20_00684at 703.117 kb on - strand, within MPMX20_00684at 703.117 kb on - strand, within MPMX20_00684at 703.176 kb on - strand, within MPMX20_00684at 703.187 kb on - strand, within MPMX20_00684at 703.236 kb on + strand, within MPMX20_00684at 703.255 kb on - strand, within MPMX20_00684at 703.278 kb on - strand, within MPMX20_00684at 703.286 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.296 kb on + strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.304 kb on - strand, within MPMX20_00684at 703.323 kb on + strand, within MPMX20_00684at 703.331 kb on - strand, within MPMX20_00684at 703.412 kb on + strand, within MPMX20_00684at 703.422 kb on + strand, within MPMX20_00684at 703.425 kb on - strand, within MPMX20_00684at 703.430 kb on - strand, within MPMX20_00684at 703.431 kb on + strand, within MPMX20_00684at 703.481 kb on + strand, within MPMX20_00684at 703.481 kb on + strand, within MPMX20_00684at 703.546 kb on - strand, within MPMX20_00684at 703.559 kb on - strand, within MPMX20_00684at 703.611 kb on - strandat 703.619 kb on - strandat 703.629 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.703 kb on + strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.711 kb on - strandat 703.737 kb on + strandat 703.737 kb on + strandat 703.754 kb on + strandat 703.754 kb on + strandat 703.754 kb on + strandat 703.762 kb on - strandat 703.766 kb on - strandat 703.777 kb on + strandat 703.777 kb on + strandat 703.823 kb on + strandat 703.824 kb on - strandat 703.825 kb on + strandat 703.833 kb on - strandat 703.833 kb on - strandat 703.836 kb on - strandat 703.855 kb on - strand, within MPMX20_00685at 703.881 kb on + strand, within MPMX20_00685at 703.881 kb on + strand, within MPMX20_00685at 703.889 kb on - strand, within MPMX20_00685at 703.903 kb on - strand, within MPMX20_00685at 703.903 kb on - strand, within MPMX20_00685

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2
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701,282 + MPMX20_00682 0.34 -0.5
701,317 - MPMX20_00682 0.37 -1.2
701,348 - MPMX20_00682 0.40 -1.1
701,369 + MPMX20_00682 0.42 +0.5
701,377 - MPMX20_00682 0.42 -2.3
701,411 + MPMX20_00682 0.45 -2.2
701,427 + MPMX20_00682 0.46 -2.2
701,430 + MPMX20_00682 0.46 +0.1
701,521 + MPMX20_00682 0.54 -0.4
701,575 + MPMX20_00682 0.58 -1.0
701,575 + MPMX20_00682 0.58 +1.5
701,623 - MPMX20_00682 0.62 -2.2
701,646 + MPMX20_00682 0.64 +1.9
701,646 + MPMX20_00682 0.64 +0.3
701,646 + MPMX20_00682 0.64 +1.2
701,646 + MPMX20_00682 0.64 -0.3
701,646 + MPMX20_00682 0.64 -0.0
701,646 + MPMX20_00682 0.64 -1.6
701,646 + MPMX20_00682 0.64 -0.0
701,654 - MPMX20_00682 0.65 -2.0
701,690 + MPMX20_00682 0.68 -0.7
701,703 + MPMX20_00682 0.69 -2.7
701,722 - MPMX20_00682 0.70 +1.4
701,754 - MPMX20_00682 0.73 -2.3
701,788 - MPMX20_00682 0.76 -3.2
701,791 - MPMX20_00682 0.76 +0.5
701,830 - MPMX20_00682 0.79 -3.2
701,846 + MPMX20_00682 0.80 +4.1
701,914 - MPMX20_00682 0.86 +2.8
701,916 + MPMX20_00682 0.86 -2.8
701,917 + MPMX20_00682 0.86 +0.8
701,922 + MPMX20_00682 0.87 -2.2
701,961 + MPMX20_00682 0.90 +2.2
701,977 + -1.9
702,049 - +0.4
702,061 + +0.4
702,069 - -0.9
702,073 + -1.1
702,078 + -0.9
702,078 + -1.7
702,078 + -0.3
702,086 - -0.9
702,088 + -0.8
702,088 + +3.7
702,096 - -0.7
702,126 + +1.2
702,198 + +0.1
702,198 + -1.4
702,198 + -0.5
702,203 + -2.5
702,206 - -0.1
702,211 - -0.9
702,242 + -2.9
702,377 + MPMX20_00683 0.26 +2.1
702,377 + MPMX20_00683 0.26 +0.3
702,385 - MPMX20_00683 0.27 +0.5
702,414 + MPMX20_00683 0.31 +0.5
702,456 + MPMX20_00683 0.37 -2.7
702,481 + MPMX20_00683 0.40 +1.9
702,489 - MPMX20_00683 0.41 -3.0
702,489 - MPMX20_00683 0.41 +0.9
702,508 + MPMX20_00683 0.44 +1.5
702,527 + MPMX20_00683 0.47 -2.3
702,555 + MPMX20_00683 0.51 -0.7
702,589 - MPMX20_00683 0.55 +3.6
702,633 - MPMX20_00683 0.61 +0.8
702,633 - MPMX20_00683 0.61 -1.7
702,645 + MPMX20_00683 0.63 -1.7
702,650 + MPMX20_00683 0.64 -0.0
702,655 + MPMX20_00683 0.64 -2.7
702,660 + MPMX20_00683 0.65 -1.5
702,668 - MPMX20_00683 0.66 -0.8
702,673 - MPMX20_00683 0.67 +8.7
702,681 - MPMX20_00683 0.68 -1.7
702,746 + MPMX20_00683 0.77 -2.1
702,914 - -0.1
703,112 - MPMX20_00684 0.22 -1.3
703,117 - MPMX20_00684 0.23 +0.4
703,117 - MPMX20_00684 0.23 +1.8
703,176 - MPMX20_00684 0.31 -0.2
703,187 - MPMX20_00684 0.32 +2.1
703,236 + MPMX20_00684 0.39 +0.8
703,255 - MPMX20_00684 0.42 -0.6
703,278 - MPMX20_00684 0.45 -1.6
703,286 + MPMX20_00684 0.47 -1.3
703,296 + MPMX20_00684 0.48 -2.8
703,296 + MPMX20_00684 0.48 -1.5
703,296 + MPMX20_00684 0.48 -1.5
703,296 + MPMX20_00684 0.48 +1.4
703,296 + MPMX20_00684 0.48 +1.0
703,296 + MPMX20_00684 0.48 +1.9
703,296 + MPMX20_00684 0.48 +0.1
703,296 + MPMX20_00684 0.48 +2.8
703,296 + MPMX20_00684 0.48 -1.6
703,296 + MPMX20_00684 0.48 +0.0
703,296 + MPMX20_00684 0.48 -1.2
703,296 + MPMX20_00684 0.48 +0.3
703,296 + MPMX20_00684 0.48 -1.0
703,296 + MPMX20_00684 0.48 -2.9
703,296 + MPMX20_00684 0.48 -1.5
703,296 + MPMX20_00684 0.48 +2.6
703,296 + MPMX20_00684 0.48 +0.1
703,296 + MPMX20_00684 0.48 +0.1
703,296 + MPMX20_00684 0.48 -0.6
703,296 + MPMX20_00684 0.48 +0.3
703,304 - MPMX20_00684 0.49 -2.3
703,304 - MPMX20_00684 0.49 +1.0
703,304 - MPMX20_00684 0.49 +2.8
703,304 - MPMX20_00684 0.49 -0.7
703,304 - MPMX20_00684 0.49 -0.9
703,304 - MPMX20_00684 0.49 +4.0
703,304 - MPMX20_00684 0.49 -0.5
703,304 - MPMX20_00684 0.49 -1.2
703,304 - MPMX20_00684 0.49 -1.2
703,304 - MPMX20_00684 0.49 -3.6
703,304 - MPMX20_00684 0.49 +0.8
703,304 - MPMX20_00684 0.49 +0.4
703,304 - MPMX20_00684 0.49 -2.3
703,304 - MPMX20_00684 0.49 -1.7
703,304 - MPMX20_00684 0.49 -1.0
703,304 - MPMX20_00684 0.49 +2.0
703,304 - MPMX20_00684 0.49 -0.5
703,304 - MPMX20_00684 0.49 +1.4
703,304 - MPMX20_00684 0.49 -0.9
703,304 - MPMX20_00684 0.49 +1.8
703,323 + MPMX20_00684 0.52 +0.2
703,331 - MPMX20_00684 0.53 +2.8
703,412 + MPMX20_00684 0.64 -2.3
703,422 + MPMX20_00684 0.66 +1.9
703,425 - MPMX20_00684 0.66 -1.6
703,430 - MPMX20_00684 0.67 +0.6
703,431 + MPMX20_00684 0.67 -0.7
703,481 + MPMX20_00684 0.74 -1.5
703,481 + MPMX20_00684 0.74 +1.1
703,546 - MPMX20_00684 0.83 +0.1
703,559 - MPMX20_00684 0.85 -0.5
703,611 - -0.2
703,619 - -0.9
703,629 + -2.0
703,703 + +1.8
703,703 + +1.7
703,703 + +0.5
703,703 + -0.7
703,703 + +8.7
703,703 + +1.0
703,703 + -1.0
703,703 + -0.8
703,711 - -0.2
703,711 - -2.2
703,711 - -0.5
703,711 - -0.0
703,711 - +1.8
703,711 - +1.4
703,711 - +0.7
703,711 - +0.2
703,737 + +1.8
703,737 + +1.6
703,754 + -0.2
703,754 + +0.4
703,754 + -2.4
703,762 - -0.4
703,766 - -0.5
703,777 + +0.8
703,777 + +0.6
703,823 + -0.2
703,824 - -2.0
703,825 + +0.6
703,833 - -0.8
703,833 - -1.7
703,836 - -2.6
703,855 - MPMX20_00685 0.13 +0.5
703,881 + MPMX20_00685 0.18 +0.4
703,881 + MPMX20_00685 0.18 -1.3
703,889 - MPMX20_00685 0.19 -1.2
703,903 - MPMX20_00685 0.22 -1.3
703,903 - MPMX20_00685 0.22 -1.9

Or see this region's nucleotide sequence