Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03860

Experiment: TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03859 and MPMX20_03860 are separated by 59 nucleotidesMPMX20_03860 and MPMX20_03861 are separated by 164 nucleotides MPMX20_03859: MPMX20_03859 - Cell division protein FtsP, at 4,065,202 to 4,066,614 _03859 MPMX20_03860: MPMX20_03860 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 4,066,674 to 4,067,411 _03860 MPMX20_03861: MPMX20_03861 - DNA topoisomerase 4 subunit A, at 4,067,576 to 4,069,834 _03861 Position (kb) 4066 4067 4068Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4065.675 kb on - strand, within MPMX20_03859at 4065.677 kb on - strand, within MPMX20_03859at 4065.716 kb on - strand, within MPMX20_03859at 4065.744 kb on + strand, within MPMX20_03859at 4065.752 kb on - strand, within MPMX20_03859at 4065.815 kb on - strand, within MPMX20_03859at 4065.843 kb on - strand, within MPMX20_03859at 4065.900 kb on + strand, within MPMX20_03859at 4065.900 kb on + strand, within MPMX20_03859at 4065.908 kb on - strand, within MPMX20_03859at 4065.908 kb on - strand, within MPMX20_03859at 4065.908 kb on - strand, within MPMX20_03859at 4065.968 kb on + strand, within MPMX20_03859at 4066.004 kb on - strand, within MPMX20_03859at 4066.020 kb on + strand, within MPMX20_03859at 4066.047 kb on - strand, within MPMX20_03859at 4066.090 kb on - strand, within MPMX20_03859at 4066.158 kb on - strand, within MPMX20_03859at 4066.158 kb on - strand, within MPMX20_03859at 4066.159 kb on + strand, within MPMX20_03859at 4066.166 kb on + strand, within MPMX20_03859at 4066.174 kb on - strand, within MPMX20_03859at 4066.293 kb on + strand, within MPMX20_03859at 4066.293 kb on + strand, within MPMX20_03859at 4066.301 kb on - strand, within MPMX20_03859at 4066.348 kb on - strand, within MPMX20_03859at 4066.350 kb on + strand, within MPMX20_03859at 4066.350 kb on + strand, within MPMX20_03859at 4066.358 kb on - strand, within MPMX20_03859at 4066.358 kb on - strand, within MPMX20_03859at 4066.382 kb on - strand, within MPMX20_03859at 4066.384 kb on - strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.386 kb on + strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.394 kb on - strand, within MPMX20_03859at 4066.409 kb on + strand, within MPMX20_03859at 4066.419 kb on + strand, within MPMX20_03859at 4066.429 kb on + strand, within MPMX20_03859at 4066.434 kb on + strand, within MPMX20_03859at 4066.442 kb on - strand, within MPMX20_03859at 4066.519 kb on - strandat 4066.552 kb on - strandat 4066.590 kb on - strandat 4066.612 kb on + strandat 4066.612 kb on + strandat 4066.672 kb on + strandat 4066.672 kb on + strandat 4067.439 kb on + strandat 4067.447 kb on - strandat 4067.447 kb on - strandat 4067.447 kb on - strandat 4067.470 kb on - strandat 4067.470 kb on - strandat 4067.470 kb on - strandat 4067.548 kb on + strandat 4067.553 kb on + strandat 4067.560 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.573 kb on + strandat 4067.581 kb on - strandat 4067.581 kb on - strandat 4067.581 kb on - strandat 4067.581 kb on - strandat 4067.586 kb on - strandat 4067.646 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2
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4,065,675 - MPMX20_03859 0.33 -0.2
4,065,677 - MPMX20_03859 0.34 -2.0
4,065,716 - MPMX20_03859 0.36 -1.4
4,065,744 + MPMX20_03859 0.38 -2.1
4,065,752 - MPMX20_03859 0.39 +0.4
4,065,815 - MPMX20_03859 0.43 -0.3
4,065,843 - MPMX20_03859 0.45 -3.0
4,065,900 + MPMX20_03859 0.49 -1.8
4,065,900 + MPMX20_03859 0.49 +1.0
4,065,908 - MPMX20_03859 0.50 +0.2
4,065,908 - MPMX20_03859 0.50 +0.1
4,065,908 - MPMX20_03859 0.50 +0.9
4,065,968 + MPMX20_03859 0.54 -3.0
4,066,004 - MPMX20_03859 0.57 +1.1
4,066,020 + MPMX20_03859 0.58 -0.3
4,066,047 - MPMX20_03859 0.60 -2.4
4,066,090 - MPMX20_03859 0.63 -0.7
4,066,158 - MPMX20_03859 0.68 +0.9
4,066,158 - MPMX20_03859 0.68 +1.2
4,066,159 + MPMX20_03859 0.68 -0.4
4,066,166 + MPMX20_03859 0.68 -0.4
4,066,174 - MPMX20_03859 0.69 +0.5
4,066,293 + MPMX20_03859 0.77 +1.4
4,066,293 + MPMX20_03859 0.77 -3.2
4,066,301 - MPMX20_03859 0.78 +0.5
4,066,348 - MPMX20_03859 0.81 -1.6
4,066,350 + MPMX20_03859 0.81 +1.4
4,066,350 + MPMX20_03859 0.81 +2.6
4,066,358 - MPMX20_03859 0.82 -2.6
4,066,358 - MPMX20_03859 0.82 -1.7
4,066,382 - MPMX20_03859 0.84 -2.3
4,066,384 - MPMX20_03859 0.84 -1.4
4,066,386 + MPMX20_03859 0.84 +0.2
4,066,386 + MPMX20_03859 0.84 +0.4
4,066,386 + MPMX20_03859 0.84 -1.0
4,066,386 + MPMX20_03859 0.84 -0.7
4,066,386 + MPMX20_03859 0.84 -0.7
4,066,386 + MPMX20_03859 0.84 -0.7
4,066,386 + MPMX20_03859 0.84 -2.4
4,066,386 + MPMX20_03859 0.84 +0.6
4,066,394 - MPMX20_03859 0.84 -0.8
4,066,394 - MPMX20_03859 0.84 +1.2
4,066,394 - MPMX20_03859 0.84 -0.4
4,066,394 - MPMX20_03859 0.84 +2.0
4,066,394 - MPMX20_03859 0.84 +0.4
4,066,394 - MPMX20_03859 0.84 -2.0
4,066,394 - MPMX20_03859 0.84 +1.4
4,066,409 + MPMX20_03859 0.85 -1.6
4,066,419 + MPMX20_03859 0.86 -2.2
4,066,429 + MPMX20_03859 0.87 -0.4
4,066,434 + MPMX20_03859 0.87 -2.3
4,066,442 - MPMX20_03859 0.88 +0.4
4,066,519 - -0.7
4,066,552 - +0.1
4,066,590 - -1.3
4,066,612 + -1.8
4,066,612 + +1.0
4,066,672 + -2.6
4,066,672 + +0.0
4,067,439 + -0.2
4,067,447 - +1.3
4,067,447 - -0.2
4,067,447 - -1.5
4,067,470 - +3.0
4,067,470 - +4.3
4,067,470 - -1.3
4,067,548 + +0.3
4,067,553 + -3.1
4,067,560 + +0.4
4,067,573 + +2.0
4,067,573 + -2.0
4,067,573 + -0.9
4,067,573 + -1.9
4,067,573 + +0.6
4,067,573 + -0.6
4,067,573 + -0.3
4,067,573 + -2.4
4,067,581 - +1.9
4,067,581 - +0.7
4,067,581 - +2.2
4,067,581 - +0.7
4,067,586 - -1.6
4,067,646 - -3.1

Or see this region's nucleotide sequence