Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03777

Experiment: TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03776 and MPMX20_03777 are separated by 186 nucleotidesMPMX20_03777 and MPMX20_03778 are separated by 91 nucleotides MPMX20_03776: MPMX20_03776 - Small-conductance mechanosensitive channel, at 3,978,747 to 3,979,601 _03776 MPMX20_03777: MPMX20_03777 - Fructose-bisphosphate aldolase class 2, at 3,979,788 to 3,980,867 _03777 MPMX20_03778: MPMX20_03778 - Phosphoglycerate kinase, at 3,980,959 to 3,982,122 _03778 Position (kb) 3979 3980 3981Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3978.793 kb on - strandat 3978.809 kb on - strandat 3978.834 kb on - strand, within MPMX20_03776at 3978.834 kb on - strand, within MPMX20_03776at 3978.837 kb on + strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776at 3978.936 kb on + strand, within MPMX20_03776at 3978.944 kb on - strand, within MPMX20_03776at 3978.956 kb on + strand, within MPMX20_03776at 3979.181 kb on - strand, within MPMX20_03776at 3979.190 kb on + strand, within MPMX20_03776at 3979.193 kb on - strand, within MPMX20_03776at 3979.205 kb on - strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.334 kb on + strand, within MPMX20_03776at 3979.349 kb on - strand, within MPMX20_03776at 3979.354 kb on - strand, within MPMX20_03776at 3979.365 kb on + strand, within MPMX20_03776at 3979.366 kb on - strand, within MPMX20_03776at 3979.383 kb on + strand, within MPMX20_03776at 3979.404 kb on + strand, within MPMX20_03776at 3979.404 kb on + strand, within MPMX20_03776at 3979.426 kb on + strand, within MPMX20_03776at 3979.433 kb on + strand, within MPMX20_03776at 3979.441 kb on - strand, within MPMX20_03776at 3979.476 kb on + strand, within MPMX20_03776at 3979.484 kb on - strand, within MPMX20_03776at 3979.496 kb on - strand, within MPMX20_03776at 3979.519 kb on + strandat 3979.525 kb on + strandat 3979.525 kb on - strandat 3979.525 kb on - strandat 3979.527 kb on - strandat 3979.586 kb on - strandat 3979.586 kb on - strandat 3979.595 kb on - strandat 3979.598 kb on - strandat 3979.652 kb on - strandat 3979.717 kb on + strandat 3980.918 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2
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3,978,793 - -0.1
3,978,809 - -3.3
3,978,834 - MPMX20_03776 0.10 -0.6
3,978,834 - MPMX20_03776 0.10 -0.0
3,978,837 + MPMX20_03776 0.11 -2.6
3,978,845 - MPMX20_03776 0.11 +2.4
3,978,845 - MPMX20_03776 0.11 -2.0
3,978,936 + MPMX20_03776 0.22 -2.0
3,978,944 - MPMX20_03776 0.23 -1.9
3,978,956 + MPMX20_03776 0.24 +1.4
3,979,181 - MPMX20_03776 0.51 -0.7
3,979,190 + MPMX20_03776 0.52 +0.4
3,979,193 - MPMX20_03776 0.52 -3.2
3,979,205 - MPMX20_03776 0.54 +1.3
3,979,217 + MPMX20_03776 0.55 -0.6
3,979,217 + MPMX20_03776 0.55 -0.4
3,979,217 + MPMX20_03776 0.55 +0.1
3,979,334 + MPMX20_03776 0.69 -1.3
3,979,349 - MPMX20_03776 0.70 -0.4
3,979,354 - MPMX20_03776 0.71 -2.4
3,979,365 + MPMX20_03776 0.72 +1.7
3,979,366 - MPMX20_03776 0.72 -0.3
3,979,383 + MPMX20_03776 0.74 -2.3
3,979,404 + MPMX20_03776 0.77 +0.1
3,979,404 + MPMX20_03776 0.77 -1.8
3,979,426 + MPMX20_03776 0.79 -0.5
3,979,433 + MPMX20_03776 0.80 -2.9
3,979,441 - MPMX20_03776 0.81 -1.4
3,979,476 + MPMX20_03776 0.85 -3.5
3,979,484 - MPMX20_03776 0.86 -1.6
3,979,496 - MPMX20_03776 0.88 -0.2
3,979,519 + -0.3
3,979,525 + +2.0
3,979,525 - -1.5
3,979,525 - -1.7
3,979,527 - +0.5
3,979,586 - -2.2
3,979,586 - +1.2
3,979,595 - +0.1
3,979,598 - +1.4
3,979,652 - -0.5
3,979,717 + +3.4
3,980,918 - +0.5

Or see this region's nucleotide sequence