Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00702

Experiment: TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00699 and MPMX20_00700 are separated by 55 nucleotidesMPMX20_00700 and MPMX20_00701 overlap by 10 nucleotidesMPMX20_00701 and MPMX20_00702 are separated by 50 nucleotidesMPMX20_00702 and MPMX20_00703 overlap by 4 nucleotides MPMX20_00699: MPMX20_00699 - Soluble lytic murein transglycosylase, at 720,087 to 722,024 _00699 MPMX20_00700: MPMX20_00700 - Trp operon repressor, at 722,080 to 722,409 _00700 MPMX20_00701: MPMX20_00701 - Inosine/xanthosine triphosphatase, at 722,400 to 722,915 _00701 MPMX20_00702: MPMX20_00702 - Adenosylcobalamin/alpha-ribazole phosphatase, at 722,966 to 723,613 _00702 MPMX20_00703: MPMX20_00703 - Right origin-binding protein, at 723,610 to 724,479 _00703 Position (kb) 722 723 724Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 721.999 kb on + strandat 722.009 kb on + strandat 722.017 kb on - strandat 722.149 kb on + strand, within MPMX20_00700at 722.227 kb on + strand, within MPMX20_00700at 722.232 kb on + strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.248 kb on - strand, within MPMX20_00700at 722.249 kb on + strand, within MPMX20_00700at 722.281 kb on - strand, within MPMX20_00700at 722.381 kb on + strandat 722.381 kb on + strandat 722.389 kb on - strandat 722.459 kb on + strand, within MPMX20_00701at 722.606 kb on + strand, within MPMX20_00701at 722.614 kb on - strand, within MPMX20_00701at 722.623 kb on + strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.633 kb on + strand, within MPMX20_00701at 722.633 kb on + strand, within MPMX20_00701at 722.659 kb on - strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.794 kb on - strand, within MPMX20_00701at 722.912 kb on + strandat 722.974 kb on + strandat 722.974 kb on + strandat 722.975 kb on - strandat 722.981 kb on - strandat 722.982 kb on - strandat 722.994 kb on + strandat 723.010 kb on - strandat 723.012 kb on - strandat 723.012 kb on - strandat 723.067 kb on - strand, within MPMX20_00702at 723.079 kb on - strand, within MPMX20_00702at 723.124 kb on - strand, within MPMX20_00702at 723.137 kb on - strand, within MPMX20_00702at 723.152 kb on + strand, within MPMX20_00702at 723.172 kb on + strand, within MPMX20_00702at 723.210 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.214 kb on + strand, within MPMX20_00702at 723.222 kb on - strand, within MPMX20_00702at 723.222 kb on - strand, within MPMX20_00702at 723.282 kb on - strand, within MPMX20_00702at 723.286 kb on + strand, within MPMX20_00702at 723.286 kb on + strand, within MPMX20_00702at 723.294 kb on - strand, within MPMX20_00702at 723.422 kb on + strand, within MPMX20_00702at 723.427 kb on + strand, within MPMX20_00702at 723.430 kb on - strand, within MPMX20_00702at 723.446 kb on + strand, within MPMX20_00702at 723.446 kb on + strand, within MPMX20_00702at 723.451 kb on + strand, within MPMX20_00702at 723.454 kb on - strand, within MPMX20_00702at 723.454 kb on - strand, within MPMX20_00702at 723.585 kb on + strandat 723.585 kb on + strandat 723.645 kb on + strandat 723.700 kb on + strand, within MPMX20_00703at 723.707 kb on - strand, within MPMX20_00703at 723.708 kb on - strand, within MPMX20_00703at 723.776 kb on + strand, within MPMX20_00703at 723.864 kb on + strand, within MPMX20_00703at 723.884 kb on + strand, within MPMX20_00703at 723.884 kb on + strand, within MPMX20_00703at 723.892 kb on - strand, within MPMX20_00703at 723.966 kb on - strand, within MPMX20_00703at 723.986 kb on + strand, within MPMX20_00703at 723.986 kb on + strand, within MPMX20_00703at 724.032 kb on - strand, within MPMX20_00703at 724.056 kb on - strand, within MPMX20_00703at 724.066 kb on - strand, within MPMX20_00703at 724.155 kb on + strand, within MPMX20_00703at 724.160 kb on + strand, within MPMX20_00703at 724.163 kb on - strand, within MPMX20_00703at 724.176 kb on + strand, within MPMX20_00703at 724.203 kb on - strand, within MPMX20_00703at 724.263 kb on - strand, within MPMX20_00703at 724.278 kb on + strand, within MPMX20_00703at 724.278 kb on + strand, within MPMX20_00703at 724.286 kb on - strand, within MPMX20_00703at 724.318 kb on + strand, within MPMX20_00703at 724.318 kb on + strand, within MPMX20_00703at 724.382 kb on - strand, within MPMX20_00703at 724.400 kb on + strandat 724.400 kb on + strandat 724.412 kb on + strandat 724.433 kb on + strandat 724.433 kb on + strandat 724.447 kb on - strandat 724.452 kb on - strandat 724.483 kb on - strandat 724.501 kb on - strandat 724.501 kb on - strandat 724.513 kb on + strandat 724.513 kb on + strandat 724.518 kb on - strandat 724.521 kb on - strandat 724.521 kb on - strandat 724.521 kb on - strandat 724.528 kb on - strandat 724.528 kb on - strandat 724.576 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2
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721,999 + -1.9
722,009 + +0.8
722,017 - -1.6
722,149 + MPMX20_00700 0.21 +0.9
722,227 + MPMX20_00700 0.45 +0.4
722,232 + MPMX20_00700 0.46 -0.5
722,235 - MPMX20_00700 0.47 -1.6
722,235 - MPMX20_00700 0.47 -1.3
722,235 - MPMX20_00700 0.47 -0.6
722,248 - MPMX20_00700 0.51 +0.4
722,249 + MPMX20_00700 0.51 -0.6
722,281 - MPMX20_00700 0.61 +1.1
722,381 + +0.6
722,381 + -0.9
722,389 - -2.1
722,459 + MPMX20_00701 0.11 +0.5
722,606 + MPMX20_00701 0.40 +0.6
722,614 - MPMX20_00701 0.41 -1.6
722,623 + MPMX20_00701 0.43 -0.4
722,631 - MPMX20_00701 0.45 -0.2
722,631 - MPMX20_00701 0.45 +0.7
722,631 - MPMX20_00701 0.45 +1.8
722,631 - MPMX20_00701 0.45 +2.9
722,631 - MPMX20_00701 0.45 +0.2
722,633 + MPMX20_00701 0.45 -1.6
722,633 + MPMX20_00701 0.45 -1.3
722,659 - MPMX20_00701 0.50 +0.6
722,725 + MPMX20_00701 0.63 -0.4
722,725 + MPMX20_00701 0.63 +0.4
722,725 + MPMX20_00701 0.63 -0.3
722,794 - MPMX20_00701 0.76 +0.2
722,912 + -0.1
722,974 + -2.4
722,974 + +0.7
722,975 - -0.4
722,981 - +0.4
722,982 - -0.5
722,994 + +0.6
723,010 - +0.5
723,012 - +1.3
723,012 - -0.9
723,067 - MPMX20_00702 0.16 -0.1
723,079 - MPMX20_00702 0.17 -2.6
723,124 - MPMX20_00702 0.24 -1.2
723,137 - MPMX20_00702 0.26 +1.1
723,152 + MPMX20_00702 0.29 +1.9
723,172 + MPMX20_00702 0.32 +1.2
723,210 + MPMX20_00702 0.38 -1.4
723,214 + MPMX20_00702 0.38 -0.4
723,214 + MPMX20_00702 0.38 +0.6
723,214 + MPMX20_00702 0.38 +0.2
723,214 + MPMX20_00702 0.38 -2.2
723,214 + MPMX20_00702 0.38 +0.3
723,214 + MPMX20_00702 0.38 -1.8
723,222 - MPMX20_00702 0.40 +0.1
723,222 - MPMX20_00702 0.40 +1.9
723,282 - MPMX20_00702 0.49 -1.0
723,286 + MPMX20_00702 0.49 +0.9
723,286 + MPMX20_00702 0.49 -0.5
723,294 - MPMX20_00702 0.51 -0.1
723,422 + MPMX20_00702 0.70 -2.4
723,427 + MPMX20_00702 0.71 +1.9
723,430 - MPMX20_00702 0.72 -0.7
723,446 + MPMX20_00702 0.74 +0.0
723,446 + MPMX20_00702 0.74 -0.2
723,451 + MPMX20_00702 0.75 -0.4
723,454 - MPMX20_00702 0.75 +2.2
723,454 - MPMX20_00702 0.75 -1.7
723,585 + -0.0
723,585 + +0.1
723,645 + +1.6
723,700 + MPMX20_00703 0.10 -0.0
723,707 - MPMX20_00703 0.11 -1.2
723,708 - MPMX20_00703 0.11 -2.8
723,776 + MPMX20_00703 0.19 +0.8
723,864 + MPMX20_00703 0.29 -0.1
723,884 + MPMX20_00703 0.31 +1.0
723,884 + MPMX20_00703 0.31 -3.0
723,892 - MPMX20_00703 0.32 -1.6
723,966 - MPMX20_00703 0.41 +0.3
723,986 + MPMX20_00703 0.43 +0.7
723,986 + MPMX20_00703 0.43 -0.6
724,032 - MPMX20_00703 0.49 -2.0
724,056 - MPMX20_00703 0.51 -2.2
724,066 - MPMX20_00703 0.52 +1.2
724,155 + MPMX20_00703 0.63 -0.3
724,160 + MPMX20_00703 0.63 -0.3
724,163 - MPMX20_00703 0.64 +0.2
724,176 + MPMX20_00703 0.65 -2.2
724,203 - MPMX20_00703 0.68 +3.1
724,263 - MPMX20_00703 0.75 -0.0
724,278 + MPMX20_00703 0.77 -2.8
724,278 + MPMX20_00703 0.77 -0.2
724,286 - MPMX20_00703 0.78 -1.4
724,318 + MPMX20_00703 0.81 +2.9
724,318 + MPMX20_00703 0.81 -0.5
724,382 - MPMX20_00703 0.89 -0.5
724,400 + +0.9
724,400 + +0.4
724,412 + -1.4
724,433 + -1.1
724,433 + -0.2
724,447 - -3.0
724,452 - -0.9
724,483 - -1.1
724,501 - +0.6
724,501 - -1.2
724,513 + -2.6
724,513 + -0.1
724,518 - -0.9
724,521 - +0.1
724,521 - +0.3
724,521 - +0.9
724,528 - +0.1
724,528 - -0.7
724,576 + +0.9

Or see this region's nucleotide sequence