Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04657

Experiment: LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049
5,307	+		MPMX20_04656	0.51	-1.2
5,314	+		MPMX20_04656	0.52	+0.9
5,314	+		MPMX20_04656	0.52	+0.2
5,315	-		MPMX20_04656	0.52	+0.4
5,317	-		MPMX20_04656	0.53	-3.4
5,319	+		MPMX20_04656	0.53	-0.6
5,319	+		MPMX20_04656	0.53	-0.9
5,358	+		MPMX20_04656	0.58	-3.5
5,358	+		MPMX20_04656	0.58	-1.1
5,366	-		MPMX20_04656	0.59	-1.0
5,366	-		MPMX20_04656	0.59	+0.4
5,366	-		MPMX20_04656	0.59	+1.1
5,366	-		MPMX20_04656	0.59	-1.6
5,368	+		MPMX20_04656	0.59	-0.0
5,370	-		MPMX20_04656	0.60	-0.7
5,371	-		MPMX20_04656	0.60	-4.1
5,388	-		MPMX20_04656	0.62	-2.0
5,397	+		MPMX20_04656	0.63	+1.4
5,427	+		MPMX20_04656	0.67	-1.1
5,457	+		MPMX20_04656	0.71	-2.9
5,457	+		MPMX20_04656	0.71	-2.5
5,486	-		MPMX20_04656	0.75	-1.1
5,486	-		MPMX20_04656	0.75	+1.5
5,487	-		MPMX20_04656	0.75	+1.7
5,498	+		MPMX20_04656	0.77	+1.4
5,498	+		MPMX20_04656	0.77	-2.4
5,515	+		MPMX20_04656	0.79	-1.1
5,515	+		MPMX20_04656	0.79	+0.2
5,523	-		MPMX20_04656	0.80	-1.6
5,523	-		MPMX20_04656	0.80	+2.0
5,541	-		MPMX20_04656	0.83	+1.1
5,541	-		MPMX20_04656	0.83	-2.1
5,545	+		MPMX20_04656	0.83	-4.1
5,546	-		MPMX20_04656	0.83	-3.0
5,556	+		MPMX20_04656	0.85	-0.5
5,575	+		MPMX20_04656	0.87	+0.5
5,577	-		MPMX20_04656	0.87	+0.0
5,580	+		MPMX20_04656	0.88	-0.1
5,585	+		MPMX20_04656	0.88	+0.6
5,592	+		MPMX20_04656	0.89	-1.1
5,606	-				+1.4
5,607	-				-0.6
5,617	+				-3.0
5,617	+				-1.7
5,618	-				-0.9
5,655	-				+2.4
5,665	-				-0.1
5,666	+				-2.5
5,673	+				+2.9
5,686	+				-4.5
5,708	-				-0.4
5,734	+				-2.3
5,734	+				-2.0
5,734	+				-2.8
5,737	-				+1.0
5,742	-				-3.8
5,742	-				-1.7
5,742	-				-3.5
5,742	-				-1.1
5,752	+				+0.3
5,752	+				-0.9
5,752	+				+1.5
5,752	+				-1.2
5,752	+				-1.4
5,753	-				-1.4
5,757	+				-1.4
5,757	+				-3.2
5,760	-				-1.6
5,760	-				-1.1
5,761	+				+0.8
5,765	-				-1.4
5,769	-				-3.4
5,789	+				+0.9
5,796	+				+0.9
5,814	+				+1.4
5,819	+				-1.4
5,821	+				-1.7
5,826	+				+0.3
5,837	-				+2.0
5,844	+				-1.6
5,852	-				-3.0
5,897	-				-3.2
5,936	+				-2.0
5,943	-				+0.4
5,943	-				+1.4
5,944	-				-1.1
5,967	-				+2.4
5,973	+				-0.6
5,987	-				-1.1
5,989	+				-1.9
5,989	+				+1.0
5,989	+				-0.9
5,992	-				-1.7
6,020	-				-1.0
6,040	+				-3.3
6,042	+				+0.8
6,080	+				-0.1
6,088	+				-1.4
6,090	+				-1.1
6,098	-				+1.3
6,104	+				+1.4
6,117	+				-0.0
6,123	-				+1.4
6,156	-				+0.4
6,162	+				+2.4
6,170	-				+3.1
6,179	+				-1.6
6,186	+				-0.9
6,186	+				-0.3
6,186	+				+1.1
6,187	-				-1.9
6,194	-				-1.5
6,194	-				-2.3
6,194	-				-1.6
6,211	+				+3.3
6,211	+				-0.6
6,211	+				+0.7
6,211	+				+0.7
6,211	+				+1.4
6,211	+				+0.4
6,211	+				+1.8
6,211	+				-2.6
6,219	-				+0.4
6,219	-				+0.8
6,219	-				+3.1
6,233	+				+0.7
6,259	-				-0.1
6,277	+				-3.1
6,289	+				-1.2
6,348	+		MPMX20_04657	0.18	-0.1
6,348	+		MPMX20_04657	0.18	+0.8
6,358	+		MPMX20_04657	0.22	-0.1
6,358	+		MPMX20_04657	0.22	-1.9
6,372	+		MPMX20_04657	0.27	+2.0
6,401	-		MPMX20_04657	0.38	+3.0
6,415	+		MPMX20_04657	0.43	+1.4
6,421	-		MPMX20_04657	0.45	-0.1
6,423	-		MPMX20_04657	0.46	-0.9
6,434	+		MPMX20_04657	0.50	-2.1
6,440	+		MPMX20_04657	0.52	-1.1
6,462	+		MPMX20_04657	0.60	-0.8
6,462	+		MPMX20_04657	0.60	+4.4
6,462	+		MPMX20_04657	0.60	-1.7
6,462	+		MPMX20_04657	0.60	-0.4
6,462	+		MPMX20_04657	0.60	+0.9
6,462	+		MPMX20_04657	0.60	-1.1
6,517	+		MPMX20_04657	0.80	+2.2
6,518	-		MPMX20_04657	0.80	+1.2
6,518	-		MPMX20_04657	0.80	+2.1
6,518	-		MPMX20_04657	0.80	+0.6
6,520	-		MPMX20_04657	0.81	-3.5
6,525	-		MPMX20_04657	0.83	-1.6
6,534	-		MPMX20_04657	0.86	+0.1
6,538	+		MPMX20_04657	0.87	-0.2
6,542	-		MPMX20_04657	0.89	-1.1
6,546	-				+0.2
6,546	-				+2.2
6,579	+				+0.3
6,593	+				+0.4
6,601	-				-1.6
6,601	-				-1.1
6,619	+		MPMX20_04658	0.11	+1.6
6,619	+		MPMX20_04658	0.11	+0.6
6,629	+		MPMX20_04658	0.15	-2.6
6,665	+		MPMX20_04658	0.31	+0.8
6,671	+		MPMX20_04658	0.33	-2.1
6,671	+		MPMX20_04658	0.33	+0.1
6,671	+		MPMX20_04658	0.33	-0.6
6,671	+		MPMX20_04658	0.33	-3.6
6,671	+		MPMX20_04658	0.33	+0.0
6,671	+		MPMX20_04658	0.33	-0.3
6,671	+		MPMX20_04658	0.33	-1.1
6,671	+		MPMX20_04658	0.33	-1.7
6,671	+		MPMX20_04658	0.33	-2.9
6,679	-		MPMX20_04658	0.37	-1.6
6,679	-		MPMX20_04658	0.37	-1.7
6,679	-		MPMX20_04658	0.37	-0.6
6,679	-		MPMX20_04658	0.37	+1.0
6,679	-		MPMX20_04658	0.37	-2.3
6,698	+		MPMX20_04658	0.45	-1.7
6,709	+		MPMX20_04658	0.50	-2.0
6,734	+		MPMX20_04658	0.61	-2.3
6,734	+		MPMX20_04658	0.61	+2.2
6,740	+		MPMX20_04658	0.63	-1.4
6,742	-		MPMX20_04658	0.64	+0.0
6,745	+		MPMX20_04658	0.65	-1.1
6,745	+		MPMX20_04658	0.65	-1.9
6,746	+		MPMX20_04658	0.66	+0.4
6,746	+		MPMX20_04658	0.66	+1.3
6,753	-		MPMX20_04658	0.69	-1.6
6,753	-		MPMX20_04658	0.69	-0.9
6,773	+		MPMX20_04658	0.77	-0.8
6,773	+		MPMX20_04658	0.77	-1.9
6,773	+		MPMX20_04658	0.77	-2.9
6,773	+		MPMX20_04658	0.77	+0.4
6,773	+		MPMX20_04658	0.77	-1.3
6,773	+		MPMX20_04658	0.77	-3.1
6,773	+		MPMX20_04658	0.77	+1.4
6,773	+		MPMX20_04658	0.77	-2.9
6,773	+		MPMX20_04658	0.77	+1.4
6,773	+		MPMX20_04658	0.77	-1.3
6,773	+		MPMX20_04658	0.77	+1.6
6,775	+		MPMX20_04658	0.78	+0.0
6,775	+		MPMX20_04658	0.78	-2.9
6,775	+		MPMX20_04658	0.78	+2.4
6,775	+		MPMX20_04658	0.78	+0.3
6,775	+		MPMX20_04658	0.78	+0.4
6,775	+		MPMX20_04658	0.78	+0.7
6,781	-		MPMX20_04658	0.81	+0.4
6,781	-		MPMX20_04658	0.81	-0.7
6,781	-		MPMX20_04658	0.81	-2.4
6,781	-		MPMX20_04658	0.81	-0.6
6,781	-		MPMX20_04658	0.81	-0.9
6,783	-		MPMX20_04658	0.82	-1.1
6,783	-		MPMX20_04658	0.82	+1.3
6,783	-		MPMX20_04658	0.82	-1.8
6,783	-		MPMX20_04658	0.82	-0.8
6,783	-		MPMX20_04658	0.82	-0.8
6,783	-		MPMX20_04658	0.82	-0.1
6,783	-		MPMX20_04658	0.82	-3.6
6,783	-		MPMX20_04658	0.82	+1.7
6,783	-		MPMX20_04658	0.82	+0.8
6,798	-		MPMX20_04658	0.88	-3.4
6,815	-				+0.2
6,826	-				-0.1
6,832	+				-3.1
6,841	+				-4.6
6,841	+				-3.3
6,841	+				-2.6
6,841	+				+3.0
6,849	+				+1.0
6,849	-				-2.3
6,867	+				+0.7
6,886	-				-2.4
6,891	+				-2.6
6,891	+				-2.3
6,891	+				-2.6
6,891	+				+0.4
6,896	+				-0.1
6,897	+				-0.6
6,899	-				+0.4
6,899	-				+0.4
6,901	+				+0.0
6,901	+				-1.7
6,903	+				-2.8
6,903	+				-2.5
6,903	+				-2.6
6,903	+				+1.4
6,903	+				-0.1
6,903	+				+0.2
6,903	+				-2.4
6,903	+				-3.9
6,903	+				+0.4
6,903	+				-0.6
6,911	-		MPMX20_04659	0.11	-3.8
6,911	-		MPMX20_04659	0.11	+1.7
6,911	-		MPMX20_04659	0.11	-3.8
6,911	-		MPMX20_04659	0.11	-1.4
6,911	-		MPMX20_04659	0.11	-1.7
6,911	-		MPMX20_04659	0.11	-1.1
6,911	-		MPMX20_04659	0.11	-2.2
6,911	-		MPMX20_04659	0.11	-0.6
6,911	-		MPMX20_04659	0.11	-3.6
6,911	-		MPMX20_04659	0.11	-1.1
6,911	-		MPMX20_04659	0.11	+1.4
6,911	-		MPMX20_04659	0.11	-1.4
6,913	+		MPMX20_04659	0.12	-1.6
6,921	-		MPMX20_04659	0.15	+0.7
6,924	+		MPMX20_04659	0.17	+0.8
6,938	+		MPMX20_04659	0.23	-0.2
6,946	-		MPMX20_04659	0.26	-0.8
6,961	+		MPMX20_04659	0.33	-1.7
6,961	+		MPMX20_04659	0.33	-2.6
6,961	+		MPMX20_04659	0.33	-1.6
6,961	+		MPMX20_04659	0.33	+1.9
6,976	+		MPMX20_04659	0.39	-2.3
6,984	-		MPMX20_04659	0.43	-2.1
6,984	-		MPMX20_04659	0.43	-0.4
6,984	-		MPMX20_04659	0.43	-2.0
6,989	-		MPMX20_04659	0.45	+3.6
6,998	+		MPMX20_04659	0.49	+5.8
7,017	+		MPMX20_04659	0.57	-1.6
7,058	+		MPMX20_04659	0.75	-0.1
7,058	+		MPMX20_04659	0.75	-0.9
7,058	+		MPMX20_04659	0.75	-3.2
7,058	+		MPMX20_04659	0.75	-0.6
7,058	+		MPMX20_04659	0.75	-3.7
7,058	+		MPMX20_04659	0.75	-3.8
7,058	+		MPMX20_04659	0.75	-0.6
7,066	-		MPMX20_04659	0.79	+0.3
7,066	-		MPMX20_04659	0.79	-0.6
7,066	-		MPMX20_04659	0.79	-1.9
7,066	-		MPMX20_04659	0.79	+0.4
7,066	-		MPMX20_04659	0.79	+1.4
7,068	+		MPMX20_04659	0.80	-1.3
7,068	+		MPMX20_04659	0.80	-4.2
7,068	+		MPMX20_04659	0.80	+2.8
7,076	-		MPMX20_04659	0.83	+3.4
7,087	-		MPMX20_04659	0.88	-1.3
7,089	+		MPMX20_04659	0.89	-2.0
7,089	+		MPMX20_04659	0.89	+0.9
7,089	+		MPMX20_04659	0.89	-1.3
7,089	+		MPMX20_04659	0.89	-2.1
7,089	+		MPMX20_04659	0.89	-0.1
7,089	+		MPMX20_04659	0.89	-3.9
7,089	+		MPMX20_04659	0.89	-0.1
7,090	+		MPMX20_04659	0.89	+4.3
7,090	+		MPMX20_04659	0.89	-0.9
7,090	-		MPMX20_04659	0.89	+3.0
7,090	-		MPMX20_04659	0.89	+2.4
7,090	-		MPMX20_04659	0.89	+3.8
7,090	-		MPMX20_04659	0.89	+1.9
7,090	-		MPMX20_04659	0.89	-1.4
7,092	+				+1.4
7,097	-				-1.4
7,097	-				+0.4
7,104	-				-2.1
7,109	+				-1.4
7,123	+				+1.4
7,123	+				-0.1
7,123	+				-3.9
7,123	+				-1.4
7,123	+				-2.5
7,125	+				+0.4
7,125	+				+0.3
7,125	+				-1.1
7,125	+				+1.4
7,125	+				-3.6
7,125	+				-0.1
7,125	+				-2.6
7,125	+				-1.1
7,125	+				+0.7
7,125	+				-1.6
7,125	+				+0.6
7,131	-				-0.1
7,131	-				+0.4
7,131	-				-1.1
7,131	-				+0.3
7,133	-				-4.0
7,133	-				-0.2
7,133	-				-1.6
7,133	-				+1.4
7,134	+				+0.1
7,134	+				+0.1
7,135	+				-0.3
7,135	+				-1.1
7,135	+				-2.0
7,135	+				-1.1
7,135	-				-2.3
7,135	-				+1.0
7,143	-				-1.3
7,148	+				-0.9
7,148	+				-2.9
7,148	+				+0.4
7,148	+				-0.6
7,148	+				-1.2
7,148	+				+1.4
7,148	+				-1.2
7,148	+				-2.8
7,148	+				+0.0
7,148	+				+1.6
7,148	+				+1.4
7,150	-				-1.6
7,154	+				-0.6
7,160	+				-1.7
7,160	+				+1.4
7,180	+				-2.6
7,180	+				-0.6
7,189	+				-1.4
7,218	+				-2.6
7,218	+				+1.4
7,237	+				+1.7
7,237	+				+1.9
7,245	-				-0.1
7,281	+				-0.9
7,281	+				-1.6
7,292	+				+0.2
7,292	+				-1.5
7,296	+				-1.3
7,296	+				+1.4
7,296	+				-0.9
7,297	+				+2.7
7,297	+				-2.9
7,304	+				-1.4
7,306	+				-1.4
7,306	+				-2.6
7,306	+				+2.6
7,306	+				-2.0
7,306	+				-1.1
7,306	+				+0.6
7,306	+				-2.1
7,306	+				-2.0
7,306	+				-2.2
7,306	+				-2.6
7,311	-				-1.9
7,350	+				+0.4
7,350	+				-2.0
7,350	+				-4.1
7,350	+				-0.1
7,350	+				-0.9
7,350	+				-0.6
7,350	+				+3.0
7,350	+				-3.1
7,350	+				-0.1
7,350	+				+0.9
7,355	+				+1.4
7,355	+				+0.1
7,355	+				-2.8
7,358	-				-0.6
7,358	-				-1.4
7,358	-				-0.6
7,358	-				+0.7
7,358	-				+2.4
7,364	+				-2.4
7,364	+				+0.4
7,379	+				-0.3
7,379	+				+0.2
7,384	+				-0.6
7,384	+				-2.3
7,384	+				-0.8
7,384	+				-0.6
7,384	+				-1.4
7,384	+				+1.3
7,384	+				-0.6
7,384	+				+0.1
7,384	+				-1.6
7,384	+				-0.9
7,392	-				+0.6
7,397	+				-0.1
7,397	+				-1.9
7,397	+				-1.1
7,397	+				-0.1
7,397	+				+3.0
7,397	+				-0.4
7,397	+				-0.9
7,405	-				-0.9
7,405	-				+0.4
7,410	+				-0.4
7,410	+				-1.7
7,410	+				-3.8
7,410	+				-4.0
7,410	+				+1.4
7,410	+				-1.1
7,412	+				-1.9
7,416	+				-1.6
7,418	+				-1.1
7,418	-				-0.1
7,424	-				-0.6
7,434	-				+1.9
7,438	+				-1.9
7,440	-				+1.4
7,442	+				-0.9
7,445	-				+1.1
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7,477	+				-1.0
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7,485	-				-2.9
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7,485	-				-0.7
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7,566	-				-1.6