Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02351

Experiment: LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02350 and MPMX20_02351 are separated by 173 nucleotidesMPMX20_02351 and MPMX20_02352 are separated by 89 nucleotides MPMX20_02350: MPMX20_02350 - Sucrose porin, at 2,476,788 to 2,478,305 _02350 MPMX20_02351: MPMX20_02351 - Fructokinase, at 2,478,479 to 2,479,384 _02351 MPMX20_02352: MPMX20_02352 - Blue light- and temperature-regulated antirepressor BluF, at 2,479,474 to 2,480,721 _02352 Position (kb) 2478 2479 2480Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2477.497 kb on - strand, within MPMX20_02350at 2477.516 kb on - strand, within MPMX20_02350at 2477.617 kb on + strand, within MPMX20_02350at 2477.644 kb on - strand, within MPMX20_02350at 2477.741 kb on + strand, within MPMX20_02350at 2477.766 kb on - strand, within MPMX20_02350at 2477.783 kb on - strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.825 kb on + strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.845 kb on + strand, within MPMX20_02350at 2477.853 kb on - strand, within MPMX20_02350at 2477.865 kb on - strand, within MPMX20_02350at 2477.879 kb on + strand, within MPMX20_02350at 2477.890 kb on - strand, within MPMX20_02350at 2477.961 kb on - strand, within MPMX20_02350at 2478.001 kb on - strand, within MPMX20_02350at 2478.001 kb on - strand, within MPMX20_02350at 2478.038 kb on - strand, within MPMX20_02350at 2478.043 kb on + strand, within MPMX20_02350at 2478.048 kb on - strand, within MPMX20_02350at 2478.117 kb on - strand, within MPMX20_02350at 2478.202 kb on - strandat 2478.442 kb on + strandat 2478.500 kb on - strandat 2478.548 kb on - strandat 2478.550 kb on + strandat 2478.553 kb on - strandat 2478.558 kb on - strandat 2478.619 kb on - strand, within MPMX20_02351at 2478.632 kb on + strand, within MPMX20_02351at 2478.640 kb on - strand, within MPMX20_02351at 2478.640 kb on - strand, within MPMX20_02351at 2478.720 kb on + strand, within MPMX20_02351at 2478.780 kb on + strand, within MPMX20_02351at 2478.841 kb on + strand, within MPMX20_02351at 2478.862 kb on + strand, within MPMX20_02351at 2478.870 kb on - strand, within MPMX20_02351at 2478.988 kb on + strand, within MPMX20_02351at 2478.988 kb on + strand, within MPMX20_02351at 2478.996 kb on - strand, within MPMX20_02351at 2479.000 kb on + strand, within MPMX20_02351at 2479.000 kb on + strand, within MPMX20_02351at 2479.030 kb on - strand, within MPMX20_02351at 2479.035 kb on - strand, within MPMX20_02351at 2479.087 kb on + strand, within MPMX20_02351at 2479.176 kb on + strand, within MPMX20_02351at 2479.287 kb on + strand, within MPMX20_02351at 2479.480 kb on + strandat 2479.485 kb on + strandat 2479.485 kb on + strandat 2479.493 kb on - strandat 2479.566 kb on + strandat 2479.566 kb on + strandat 2479.634 kb on - strand, within MPMX20_02352at 2479.794 kb on - strand, within MPMX20_02352at 2479.807 kb on + strand, within MPMX20_02352at 2479.817 kb on - strand, within MPMX20_02352at 2479.881 kb on - strand, within MPMX20_02352at 2479.928 kb on + strand, within MPMX20_02352at 2480.118 kb on + strand, within MPMX20_02352at 2480.201 kb on - strand, within MPMX20_02352at 2480.293 kb on - strand, within MPMX20_02352

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049
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2,477,497 - MPMX20_02350 0.47 +2.1
2,477,516 - MPMX20_02350 0.48 +1.3
2,477,617 + MPMX20_02350 0.55 -1.0
2,477,644 - MPMX20_02350 0.56 -0.7
2,477,741 + MPMX20_02350 0.63 +2.0
2,477,766 - MPMX20_02350 0.64 +2.6
2,477,783 - MPMX20_02350 0.66 -1.7
2,477,824 + MPMX20_02350 0.68 -2.6
2,477,824 + MPMX20_02350 0.68 +0.4
2,477,824 + MPMX20_02350 0.68 +2.9
2,477,824 + MPMX20_02350 0.68 -2.0
2,477,825 + MPMX20_02350 0.68 -1.0
2,477,832 - MPMX20_02350 0.69 -0.3
2,477,832 - MPMX20_02350 0.69 -2.3
2,477,832 - MPMX20_02350 0.69 +0.9
2,477,832 - MPMX20_02350 0.69 -3.1
2,477,832 - MPMX20_02350 0.69 -0.6
2,477,832 - MPMX20_02350 0.69 -1.4
2,477,832 - MPMX20_02350 0.69 +4.5
2,477,832 - MPMX20_02350 0.69 +0.9
2,477,832 - MPMX20_02350 0.69 -0.2
2,477,832 - MPMX20_02350 0.69 +0.0
2,477,832 - MPMX20_02350 0.69 +2.3
2,477,845 + MPMX20_02350 0.70 +2.4
2,477,853 - MPMX20_02350 0.70 -1.8
2,477,865 - MPMX20_02350 0.71 +3.5
2,477,879 + MPMX20_02350 0.72 +0.5
2,477,890 - MPMX20_02350 0.73 +1.3
2,477,961 - MPMX20_02350 0.77 -2.5
2,478,001 - MPMX20_02350 0.80 +1.4
2,478,001 - MPMX20_02350 0.80 +1.6
2,478,038 - MPMX20_02350 0.82 +1.4
2,478,043 + MPMX20_02350 0.83 -1.2
2,478,048 - MPMX20_02350 0.83 -3.0
2,478,117 - MPMX20_02350 0.88 -0.0
2,478,202 - -0.1
2,478,442 + +0.1
2,478,500 - -0.4
2,478,548 - -1.9
2,478,550 + -1.6
2,478,553 - -1.7
2,478,558 - -1.3
2,478,619 - MPMX20_02351 0.15 +0.6
2,478,632 + MPMX20_02351 0.17 +1.5
2,478,640 - MPMX20_02351 0.18 +2.1
2,478,640 - MPMX20_02351 0.18 -2.9
2,478,720 + MPMX20_02351 0.27 -2.6
2,478,780 + MPMX20_02351 0.33 +0.3
2,478,841 + MPMX20_02351 0.40 +0.4
2,478,862 + MPMX20_02351 0.42 +1.5
2,478,870 - MPMX20_02351 0.43 +0.7
2,478,988 + MPMX20_02351 0.56 +1.8
2,478,988 + MPMX20_02351 0.56 +1.1
2,478,996 - MPMX20_02351 0.57 -2.6
2,479,000 + MPMX20_02351 0.58 -1.6
2,479,000 + MPMX20_02351 0.58 +2.6
2,479,030 - MPMX20_02351 0.61 +0.7
2,479,035 - MPMX20_02351 0.61 +0.9
2,479,087 + MPMX20_02351 0.67 -0.1
2,479,176 + MPMX20_02351 0.77 +0.3
2,479,287 + MPMX20_02351 0.89 -0.2
2,479,480 + -1.4
2,479,485 + -0.7
2,479,485 + -1.7
2,479,493 - -0.6
2,479,566 + -1.8
2,479,566 + +1.1
2,479,634 - MPMX20_02352 0.13 +0.9
2,479,794 - MPMX20_02352 0.26 -0.9
2,479,807 + MPMX20_02352 0.27 -1.5
2,479,817 - MPMX20_02352 0.27 -0.9
2,479,881 - MPMX20_02352 0.33 -0.0
2,479,928 + MPMX20_02352 0.36 -0.5
2,480,118 + MPMX20_02352 0.52 -2.2
2,480,201 - MPMX20_02352 0.58 +2.1
2,480,293 - MPMX20_02352 0.66 -0.9

Or see this region's nucleotide sequence