Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01872

Experiment: LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049
1,965,128	-				+2.0
1,965,197	-				+1.2
1,965,199	+				+2.0
1,965,223	+				-0.5
1,965,223	+				-1.6
1,965,231	-				+1.8
1,965,233	+				-0.3
1,965,233	+				-0.2
1,965,241	+				-1.7
1,965,241	+				-0.8
1,965,241	+				-0.3
1,965,241	-				+1.7
1,965,241	-				-0.0
1,965,241	-				+0.3
1,965,241	-				-2.4
1,965,241	-				+2.6
1,965,241	-				-1.6
1,965,241	-				+0.3
1,965,241	-				+0.7
1,965,241	-				+0.3
1,965,241	-				-0.8
1,965,241	-				+3.0
1,965,241	-				+0.5
1,965,241	-				-1.3
1,965,241	-				+0.6
1,965,243	+				+1.4
1,965,243	+				+0.2
1,965,243	+				+4.0
1,965,243	+				-0.9
1,965,243	+				+1.0
1,965,243	+				-0.5
1,965,243	+				+0.2
1,965,246	-				-0.6
1,965,246	-				+0.1
1,965,249	-				+1.0
1,965,249	-				+0.7
1,965,249	-				+0.9
1,965,249	-				+1.1
1,965,249	-				-1.4
1,965,249	-				-1.4
1,965,251	-				+0.6
1,965,251	-				-0.5
1,965,251	-				+1.6
1,965,251	-				-1.3
1,965,251	-				+0.7
1,965,251	-				-2.4
1,965,251	-				+0.0
1,965,251	-				+1.5
1,965,251	-				-2.0
1,965,251	-				+0.9
1,965,251	-				+2.0
1,965,251	-				-0.8
1,965,251	-				+1.2
1,965,251	-				-2.9
1,965,251	-				+0.7
1,965,251	-				-2.8
1,965,251	-				+0.1
1,965,251	-				-1.1
1,965,251	-				+2.1
1,965,251	-				+0.4
1,965,251	-				+0.5
1,965,251	-				-3.1
1,965,251	-				+0.2
1,965,251	-				-0.6
1,965,251	-				+0.1
1,965,251	-				+0.9
1,965,251	-				-2.2
1,965,251	-				+0.7
1,965,251	-				-2.6
1,965,251	-				-2.3
1,965,251	-				+0.1
1,965,251	-				-0.5
1,965,251	-				-1.6
1,965,251	-				-1.5
1,965,251	-				+0.6
1,965,251	-				-3.1
1,965,251	-				+0.3
1,965,251	-				+0.4
1,965,251	-				-0.2
1,965,251	-				-1.2
1,965,251	-				-0.7
1,965,251	-				+1.0
1,965,251	-				-1.5
1,965,251	-				-1.1
1,965,273	-				-2.6
1,965,299	-				-1.8
1,965,303	+				+0.7
1,965,306	-				-0.3
1,965,306	-				+0.4
1,965,306	-				-0.9
1,965,306	-				-1.9
1,965,308	-				-2.1
1,965,311	-				-3.0
1,965,311	-				+1.4
1,965,315	+				+0.4
1,965,318	-				+0.5
1,965,318	-				-0.6
1,965,318	-				-0.7
1,965,319	-				+1.7
1,965,319	-				-0.7
1,965,319	-				+5.0
1,965,319	-				+0.5
1,965,319	-				-1.8
1,965,319	-				+2.4
1,965,319	-				-1.7
1,965,319	-				+0.9
1,965,319	-				-0.6
1,965,319	-				-0.2
1,965,319	-				-0.1
1,965,319	-				-1.2
1,965,319	-				+0.9
1,965,321	+				+2.0
1,965,321	+				-1.3
1,965,321	+				+1.4
1,965,321	+				-0.2
1,965,321	+				+1.4
1,965,324	-				-0.5
1,965,324	-				-2.4
1,965,324	-				-2.2
1,965,325	-				-2.8
1,965,329	-				+0.4
1,965,329	-				-0.8
1,965,329	-				+1.5
1,965,329	-				+0.2
1,965,329	-				+0.2
1,965,329	-				+2.6
1,965,329	-				-1.4
1,965,329	-				+0.0
1,965,329	-				-0.4
1,965,329	-				+1.1
1,965,329	-				+1.9
1,965,329	-				-1.5
1,965,329	-				-0.3
1,965,329	-				-0.5
1,965,329	-				-0.7
1,965,329	-				+0.1
1,965,329	-				+0.4
1,965,329	-				-1.6
1,965,329	-				+0.1
1,965,329	-				-3.1
1,965,329	-				-0.2
1,965,329	-				-1.9
1,965,329	-				+1.4
1,965,329	-				-1.3
1,965,329	-				-0.2
1,965,330	-				+0.2
1,965,330	-				-1.7
1,965,336	-		MPMX20_01871	0.11	-0.6
1,965,366	+		MPMX20_01871	0.17	+0.0
1,965,366	+		MPMX20_01871	0.17	-0.3
1,965,372	-		MPMX20_01871	0.18	+0.4
1,965,372	-		MPMX20_01871	0.18	-2.1
1,965,374	-		MPMX20_01871	0.18	-1.5
1,965,374	-		MPMX20_01871	0.18	-0.8
1,965,377	-		MPMX20_01871	0.19	+2.0
1,965,385	+		MPMX20_01871	0.20	-1.3
1,965,424	+		MPMX20_01871	0.28	+4.4
1,965,424	+		MPMX20_01871	0.28	-1.8
1,965,424	+		MPMX20_01871	0.28	+2.0
1,965,432	+		MPMX20_01871	0.30	+1.1
1,965,432	-		MPMX20_01871	0.30	-3.3
1,965,432	-		MPMX20_01871	0.30	+2.3
1,965,454	+		MPMX20_01871	0.34	+1.1
1,965,463	-		MPMX20_01871	0.36	-0.8
1,965,508	-		MPMX20_01871	0.45	-0.5
1,965,519	+		MPMX20_01871	0.47	+1.4
1,965,519	+		MPMX20_01871	0.47	-2.0
1,965,519	+		MPMX20_01871	0.47	+1.2
1,965,519	+		MPMX20_01871	0.47	-1.2
1,965,519	+		MPMX20_01871	0.47	+1.2
1,965,527	-		MPMX20_01871	0.49	+1.7
1,965,527	-		MPMX20_01871	0.49	-0.5
1,965,553	+		MPMX20_01871	0.54	+0.5
1,965,553	+		MPMX20_01871	0.54	-1.4
1,965,553	+		MPMX20_01871	0.54	+1.2
1,965,606	+		MPMX20_01871	0.65	-1.7
1,965,627	+		MPMX20_01871	0.69	+2.0
1,965,670	+		MPMX20_01871	0.78	-1.1
1,965,726	+		MPMX20_01871	0.89	+0.4
1,965,726	+		MPMX20_01871	0.89	+5.2
1,965,734	-				-2.9
1,965,734	-				-3.2
1,965,747	+				-0.2
1,965,800	-				+2.0
1,965,800	-				+1.0
1,965,800	-				+1.9
1,965,834	+				-1.2
1,965,903	-				+4.0
1,965,925	-				-0.5
1,965,927	+				-0.1
1,965,956	+				-1.8
1,965,958	+				-2.2
1,965,958	+				-0.0
1,965,963	+				-1.0
1,965,963	+				-1.6
1,965,963	+				-2.8
1,965,966	-				+1.5
1,965,971	-				+2.0
1,965,971	-				-1.2
1,965,971	-				+1.2
1,965,971	-				-0.1
1,966,047	-				+1.0
1,966,047	-				-0.8
1,966,047	-				-0.5
1,966,047	-				+1.5
1,966,055	+				-1.7
1,966,057	-				-0.9
1,966,057	-				+0.2
1,966,063	-				+0.1
1,966,107	+				-2.3
1,966,203	-		MPMX20_01872	0.22	+2.5
1,966,260	+		MPMX20_01872	0.33	-1.0
1,966,260	+		MPMX20_01872	0.33	+0.4
1,966,268	-		MPMX20_01872	0.34	-1.0
1,966,274	+		MPMX20_01872	0.35	-2.9
1,966,304	+		MPMX20_01872	0.41	-2.1
1,966,312	-		MPMX20_01872	0.42	-2.0
1,966,317	-		MPMX20_01872	0.43	-0.1
1,966,451	+		MPMX20_01872	0.67	-0.9
1,966,457	-		MPMX20_01872	0.68	-1.7
1,966,459	-		MPMX20_01872	0.68	+0.7
1,966,521	+		MPMX20_01872	0.79	+2.0
1,966,555	-		MPMX20_01872	0.85	+5.7
1,966,555	-		MPMX20_01872	0.85	+0.3
1,966,596	-				-0.7
1,966,645	+				-3.7
1,966,645	+				-0.3
1,966,731	-		MPMX20_01873	0.13	-0.2
1,966,869	+		MPMX20_01873	0.29	-1.3
1,966,880	+		MPMX20_01873	0.30	-2.5
1,966,939	-		MPMX20_01873	0.37	+0.4
1,966,939	-		MPMX20_01873	0.37	-1.9
1,966,974	-		MPMX20_01873	0.41	-0.0
1,967,030	+		MPMX20_01873	0.47	+1.4
1,967,068	+		MPMX20_01873	0.52	+0.6
1,967,068	+		MPMX20_01873	0.52	+2.6
1,967,068	+		MPMX20_01873	0.52	+0.9
1,967,068	+		MPMX20_01873	0.52	+0.1
1,967,076	-		MPMX20_01873	0.53	-0.7
1,967,076	-		MPMX20_01873	0.53	+3.3
1,967,076	-		MPMX20_01873	0.53	-1.0
1,967,117	-		MPMX20_01873	0.57	+3.0
1,967,134	+		MPMX20_01873	0.59	+0.7
1,967,139	+		MPMX20_01873	0.60	-1.4
1,967,139	+		MPMX20_01873	0.60	-1.7
1,967,147	-		MPMX20_01873	0.61	-0.9
1,967,280	-		MPMX20_01873	0.76	+0.2
1,967,284	+		MPMX20_01873	0.76	-1.4
1,967,299	+		MPMX20_01873	0.78	+1.4
1,967,299	+		MPMX20_01873	0.78	-2.3
1,967,299	+		MPMX20_01873	0.78	-1.6
1,967,299	+		MPMX20_01873	0.78	+0.1
1,967,299	+		MPMX20_01873	0.78	-0.7
1,967,299	+		MPMX20_01873	0.78	+0.9
1,967,307	-		MPMX20_01873	0.79	+1.8
1,967,307	-		MPMX20_01873	0.79	-0.7
1,967,348	-		MPMX20_01873	0.84	-2.3
1,967,353	-		MPMX20_01873	0.84	+0.4
1,967,355	+		MPMX20_01873	0.84	+0.7
1,967,355	+		MPMX20_01873	0.84	+0.3
1,967,361	-		MPMX20_01873	0.85	+1.9
1,967,375	+		MPMX20_01873	0.87	-0.3
1,967,409	+				-1.5
1,967,412	-				-0.3
1,967,498	+				-2.2
1,967,612	+				-2.2