Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00699

Experiment: LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00698 and MPMX20_00699 are separated by 227 nucleotidesMPMX20_00699 and MPMX20_00700 are separated by 55 nucleotidesMPMX20_00700 and MPMX20_00701 overlap by 10 nucleotidesMPMX20_00701 and MPMX20_00702 are separated by 50 nucleotides MPMX20_00698: MPMX20_00698 - Energy-dependent translational throttle protein EttA, at 718,192 to 719,859 _00698 MPMX20_00699: MPMX20_00699 - Soluble lytic murein transglycosylase, at 720,087 to 722,024 _00699 MPMX20_00700: MPMX20_00700 - Trp operon repressor, at 722,080 to 722,409 _00700 MPMX20_00701: MPMX20_00701 - Inosine/xanthosine triphosphatase, at 722,400 to 722,915 _00701 MPMX20_00702: MPMX20_00702 - Adenosylcobalamin/alpha-ribazole phosphatase, at 722,966 to 723,613 _00702 Position (kb) 720 721 722 723Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 719.201 kb on + strand, within MPMX20_00698at 719.302 kb on + strand, within MPMX20_00698at 719.303 kb on + strand, within MPMX20_00698at 719.339 kb on - strand, within MPMX20_00698at 719.374 kb on - strand, within MPMX20_00698at 719.418 kb on - strand, within MPMX20_00698at 719.539 kb on + strand, within MPMX20_00698at 719.594 kb on - strand, within MPMX20_00698at 719.598 kb on + strand, within MPMX20_00698at 719.606 kb on - strand, within MPMX20_00698at 719.859 kb on + strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.882 kb on - strandat 719.982 kb on - strandat 720.009 kb on - strandat 720.043 kb on + strandat 720.167 kb on - strandat 720.230 kb on + strandat 720.230 kb on + strandat 720.230 kb on + strandat 720.236 kb on - strandat 720.267 kb on - strandat 720.283 kb on - strand, within MPMX20_00699at 720.361 kb on + strand, within MPMX20_00699at 720.438 kb on - strand, within MPMX20_00699at 720.438 kb on - strand, within MPMX20_00699at 720.485 kb on - strand, within MPMX20_00699at 720.527 kb on + strand, within MPMX20_00699at 720.546 kb on + strand, within MPMX20_00699at 720.638 kb on + strand, within MPMX20_00699at 720.704 kb on + strand, within MPMX20_00699at 720.768 kb on + strand, within MPMX20_00699at 720.768 kb on + strand, within MPMX20_00699at 720.775 kb on + strand, within MPMX20_00699at 720.776 kb on - strand, within MPMX20_00699at 720.776 kb on - strand, within MPMX20_00699at 720.902 kb on + strand, within MPMX20_00699at 720.911 kb on + strand, within MPMX20_00699at 720.942 kb on - strand, within MPMX20_00699at 721.160 kb on + strand, within MPMX20_00699at 721.272 kb on + strand, within MPMX20_00699at 721.397 kb on + strand, within MPMX20_00699at 721.415 kb on - strand, within MPMX20_00699at 721.416 kb on - strand, within MPMX20_00699at 721.422 kb on - strand, within MPMX20_00699at 721.455 kb on + strand, within MPMX20_00699at 721.487 kb on + strand, within MPMX20_00699at 721.487 kb on + strand, within MPMX20_00699at 721.495 kb on - strand, within MPMX20_00699at 721.603 kb on - strand, within MPMX20_00699at 721.683 kb on + strand, within MPMX20_00699at 721.714 kb on + strand, within MPMX20_00699at 721.725 kb on - strand, within MPMX20_00699at 721.820 kb on + strand, within MPMX20_00699at 721.820 kb on + strand, within MPMX20_00699at 721.828 kb on - strand, within MPMX20_00699at 721.830 kb on + strand, within MPMX20_00699at 721.830 kb on + strand, within MPMX20_00699at 721.872 kb on - strandat 721.882 kb on - strandat 721.943 kb on + strandat 721.944 kb on + strandat 721.999 kb on + strandat 722.009 kb on + strandat 722.017 kb on - strandat 722.149 kb on + strand, within MPMX20_00700at 722.227 kb on + strand, within MPMX20_00700at 722.232 kb on + strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.235 kb on - strand, within MPMX20_00700at 722.248 kb on - strand, within MPMX20_00700at 722.249 kb on + strand, within MPMX20_00700at 722.281 kb on - strand, within MPMX20_00700at 722.381 kb on + strandat 722.381 kb on + strandat 722.389 kb on - strandat 722.459 kb on + strand, within MPMX20_00701at 722.606 kb on + strand, within MPMX20_00701at 722.614 kb on - strand, within MPMX20_00701at 722.623 kb on + strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.631 kb on - strand, within MPMX20_00701at 722.633 kb on + strand, within MPMX20_00701at 722.633 kb on + strand, within MPMX20_00701at 722.659 kb on - strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.725 kb on + strand, within MPMX20_00701at 722.794 kb on - strand, within MPMX20_00701at 722.912 kb on + strandat 722.974 kb on + strandat 722.974 kb on + strandat 722.975 kb on - strandat 722.981 kb on - strandat 722.982 kb on - strandat 722.994 kb on + strandat 723.010 kb on - strandat 723.012 kb on - strandat 723.012 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049
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719,201 + MPMX20_00698 0.60 -2.3
719,302 + MPMX20_00698 0.67 -3.6
719,303 + MPMX20_00698 0.67 -2.5
719,339 - MPMX20_00698 0.69 +0.7
719,374 - MPMX20_00698 0.71 -0.6
719,418 - MPMX20_00698 0.74 -0.2
719,539 + MPMX20_00698 0.81 -0.0
719,594 - MPMX20_00698 0.84 -0.9
719,598 + MPMX20_00698 0.84 -0.3
719,606 - MPMX20_00698 0.85 -1.0
719,859 + -1.7
719,866 - +0.2
719,866 - -1.0
719,866 - -1.8
719,866 - -0.8
719,882 - -2.9
719,982 - +1.2
720,009 - -0.6
720,043 + +0.7
720,167 - +0.7
720,230 + -2.4
720,230 + +0.9
720,230 + -3.1
720,236 - -0.8
720,267 - -0.1
720,283 - MPMX20_00699 0.10 +0.6
720,361 + MPMX20_00699 0.14 -0.7
720,438 - MPMX20_00699 0.18 -1.9
720,438 - MPMX20_00699 0.18 -3.5
720,485 - MPMX20_00699 0.21 +2.1
720,527 + MPMX20_00699 0.23 +2.1
720,546 + MPMX20_00699 0.24 -0.1
720,638 + MPMX20_00699 0.28 +1.2
720,704 + MPMX20_00699 0.32 -0.9
720,768 + MPMX20_00699 0.35 -1.7
720,768 + MPMX20_00699 0.35 +0.9
720,775 + MPMX20_00699 0.36 +1.3
720,776 - MPMX20_00699 0.36 -0.9
720,776 - MPMX20_00699 0.36 -0.8
720,902 + MPMX20_00699 0.42 +0.2
720,911 + MPMX20_00699 0.43 -1.6
720,942 - MPMX20_00699 0.44 -0.3
721,160 + MPMX20_00699 0.55 +0.5
721,272 + MPMX20_00699 0.61 +1.4
721,397 + MPMX20_00699 0.68 +0.5
721,415 - MPMX20_00699 0.69 -1.8
721,416 - MPMX20_00699 0.69 -0.8
721,422 - MPMX20_00699 0.69 +0.7
721,455 + MPMX20_00699 0.71 +1.0
721,487 + MPMX20_00699 0.72 +4.8
721,487 + MPMX20_00699 0.72 -0.3
721,495 - MPMX20_00699 0.73 -2.0
721,603 - MPMX20_00699 0.78 -2.5
721,683 + MPMX20_00699 0.82 -1.0
721,714 + MPMX20_00699 0.84 +0.4
721,725 - MPMX20_00699 0.85 +3.8
721,820 + MPMX20_00699 0.89 +0.4
721,820 + MPMX20_00699 0.89 +3.9
721,828 - MPMX20_00699 0.90 -1.9
721,830 + MPMX20_00699 0.90 +1.4
721,830 + MPMX20_00699 0.90 +3.2
721,872 - -0.7
721,882 - -1.6
721,943 + -0.9
721,944 + +0.7
721,999 + -0.9
722,009 + +1.4
722,017 - -1.5
722,149 + MPMX20_00700 0.21 -0.9
722,227 + MPMX20_00700 0.45 +0.4
722,232 + MPMX20_00700 0.46 -0.5
722,235 - MPMX20_00700 0.47 +1.0
722,235 - MPMX20_00700 0.47 -1.3
722,235 - MPMX20_00700 0.47 -2.1
722,248 - MPMX20_00700 0.51 +0.7
722,249 + MPMX20_00700 0.51 -0.6
722,281 - MPMX20_00700 0.61 -0.5
722,381 + +4.4
722,381 + +1.0
722,389 - -2.0
722,459 + MPMX20_00701 0.11 -0.8
722,606 + MPMX20_00701 0.40 -3.1
722,614 - MPMX20_00701 0.41 +1.7
722,623 + MPMX20_00701 0.43 +1.2
722,631 - MPMX20_00701 0.45 +1.4
722,631 - MPMX20_00701 0.45 -2.1
722,631 - MPMX20_00701 0.45 -2.3
722,631 - MPMX20_00701 0.45 +0.4
722,631 - MPMX20_00701 0.45 +0.1
722,633 + MPMX20_00701 0.45 +0.5
722,633 + MPMX20_00701 0.45 -2.2
722,659 - MPMX20_00701 0.50 -0.7
722,725 + MPMX20_00701 0.63 -0.3
722,725 + MPMX20_00701 0.63 +2.4
722,725 + MPMX20_00701 0.63 -2.8
722,794 - MPMX20_00701 0.76 +2.8
722,912 + +2.8
722,974 + -0.8
722,974 + -1.0
722,975 - -0.3
722,981 - +1.2
722,982 - -0.5
722,994 + -1.9
723,010 - +0.4
723,012 - +0.8
723,012 - -2.6

Or see this region's nucleotide sequence