Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00266

Experiment: LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00265 and MPMX20_00266 are separated by 136 nucleotidesMPMX20_00266 and MPMX20_00267 are separated by 185 nucleotides MPMX20_00265: MPMX20_00265 - tRNA-dihydrouridine(20/20a) synthase, at 282,707 to 283,702 _00265 MPMX20_00266: MPMX20_00266 - Phage shock protein G, at 283,839 to 284,081 _00266 MPMX20_00267: MPMX20_00267 - Quinone oxidoreductase 1, at 284,267 to 285,250 _00267 Position (kb) 283 284 285Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 282.881 kb on + strand, within MPMX20_00265at 282.951 kb on + strand, within MPMX20_00265at 282.959 kb on - strand, within MPMX20_00265at 282.975 kb on + strand, within MPMX20_00265at 282.975 kb on + strand, within MPMX20_00265at 283.014 kb on + strand, within MPMX20_00265at 283.077 kb on + strand, within MPMX20_00265at 283.077 kb on + strand, within MPMX20_00265at 283.150 kb on - strand, within MPMX20_00265at 283.150 kb on - strand, within MPMX20_00265at 283.155 kb on - strand, within MPMX20_00265at 283.232 kb on + strand, within MPMX20_00265at 283.303 kb on + strand, within MPMX20_00265at 283.324 kb on + strand, within MPMX20_00265at 283.376 kb on + strand, within MPMX20_00265at 283.376 kb on + strand, within MPMX20_00265at 283.376 kb on + strand, within MPMX20_00265at 283.384 kb on - strand, within MPMX20_00265at 283.395 kb on + strand, within MPMX20_00265at 283.512 kb on + strand, within MPMX20_00265at 283.534 kb on + strand, within MPMX20_00265at 283.542 kb on - strand, within MPMX20_00265at 283.542 kb on - strand, within MPMX20_00265at 283.550 kb on - strand, within MPMX20_00265at 283.582 kb on + strand, within MPMX20_00265at 283.582 kb on + strand, within MPMX20_00265at 283.582 kb on + strand, within MPMX20_00265at 283.590 kb on - strand, within MPMX20_00265at 283.590 kb on - strand, within MPMX20_00265at 283.590 kb on - strand, within MPMX20_00265at 283.604 kb on + strandat 283.604 kb on + strandat 283.674 kb on + strandat 283.782 kb on - strandat 283.782 kb on - strandat 283.829 kb on + strandat 283.891 kb on + strand, within MPMX20_00266at 283.899 kb on - strand, within MPMX20_00266at 283.943 kb on - strand, within MPMX20_00266at 283.957 kb on + strand, within MPMX20_00266at 284.012 kb on - strand, within MPMX20_00266at 284.060 kb on + strandat 284.083 kb on + strandat 284.083 kb on + strandat 284.085 kb on + strandat 284.091 kb on - strandat 284.091 kb on - strandat 284.128 kb on + strandat 284.128 kb on + strandat 284.128 kb on + strandat 284.128 kb on + strandat 284.136 kb on - strandat 284.136 kb on - strandat 284.136 kb on - strandat 284.136 kb on - strandat 284.136 kb on - strandat 284.172 kb on - strandat 284.194 kb on + strandat 284.199 kb on + strandat 284.201 kb on + strandat 284.202 kb on - strandat 284.202 kb on - strandat 284.204 kb on + strandat 284.204 kb on + strandat 284.207 kb on - strandat 284.212 kb on - strandat 284.281 kb on + strandat 284.289 kb on - strandat 284.291 kb on - strandat 284.293 kb on + strandat 284.298 kb on + strandat 284.311 kb on - strandat 284.312 kb on + strandat 284.320 kb on - strandat 284.322 kb on - strandat 284.331 kb on + strandat 284.370 kb on + strand, within MPMX20_00267at 284.439 kb on + strand, within MPMX20_00267at 284.447 kb on - strand, within MPMX20_00267at 284.482 kb on - strand, within MPMX20_00267at 284.482 kb on - strand, within MPMX20_00267at 284.503 kb on + strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.545 kb on + strand, within MPMX20_00267at 284.600 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.643 kb on + strand, within MPMX20_00267at 284.651 kb on + strand, within MPMX20_00267at 284.678 kb on + strand, within MPMX20_00267at 284.699 kb on + strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.730 kb on + strand, within MPMX20_00267at 284.734 kb on + strand, within MPMX20_00267at 284.773 kb on + strand, within MPMX20_00267at 284.786 kb on - strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.840 kb on - strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.868 kb on + strand, within MPMX20_00267at 284.868 kb on + strand, within MPMX20_00267at 284.877 kb on - strand, within MPMX20_00267at 284.964 kb on - strand, within MPMX20_00267at 284.995 kb on + strand, within MPMX20_00267at 285.000 kb on + strand, within MPMX20_00267at 285.045 kb on - strand, within MPMX20_00267

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049
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282,881 + MPMX20_00265 0.17 +1.9
282,951 + MPMX20_00265 0.24 +0.6
282,959 - MPMX20_00265 0.25 -1.0
282,975 + MPMX20_00265 0.27 +2.4
282,975 + MPMX20_00265 0.27 +5.0
283,014 + MPMX20_00265 0.31 -0.9
283,077 + MPMX20_00265 0.37 -1.9
283,077 + MPMX20_00265 0.37 +0.6
283,150 - MPMX20_00265 0.44 -1.1
283,150 - MPMX20_00265 0.44 -2.4
283,155 - MPMX20_00265 0.45 -0.8
283,232 + MPMX20_00265 0.53 -1.0
283,303 + MPMX20_00265 0.60 -2.3
283,324 + MPMX20_00265 0.62 +0.5
283,376 + MPMX20_00265 0.67 -2.0
283,376 + MPMX20_00265 0.67 -0.7
283,376 + MPMX20_00265 0.67 +0.7
283,384 - MPMX20_00265 0.68 -0.5
283,395 + MPMX20_00265 0.69 +0.4
283,512 + MPMX20_00265 0.81 +1.4
283,534 + MPMX20_00265 0.83 -4.0
283,542 - MPMX20_00265 0.84 +1.2
283,542 - MPMX20_00265 0.84 -0.2
283,550 - MPMX20_00265 0.85 -1.3
283,582 + MPMX20_00265 0.88 -1.9
283,582 + MPMX20_00265 0.88 -1.3
283,582 + MPMX20_00265 0.88 +0.2
283,590 - MPMX20_00265 0.89 -0.6
283,590 - MPMX20_00265 0.89 -2.5
283,590 - MPMX20_00265 0.89 -0.2
283,604 + +1.1
283,604 + -1.8
283,674 + +1.8
283,782 - -1.7
283,782 - -1.9
283,829 + -1.1
283,891 + MPMX20_00266 0.21 +0.6
283,899 - MPMX20_00266 0.25 +1.0
283,943 - MPMX20_00266 0.43 +1.3
283,957 + MPMX20_00266 0.49 +1.9
284,012 - MPMX20_00266 0.71 -2.3
284,060 + +0.7
284,083 + -2.0
284,083 + -1.5
284,085 + +3.0
284,091 - -0.8
284,091 - -1.3
284,128 + -0.2
284,128 + +0.1
284,128 + -0.5
284,128 + -1.0
284,136 - -0.6
284,136 - +1.3
284,136 - -3.0
284,136 - +0.6
284,136 - -3.0
284,172 - -1.5
284,194 + +0.1
284,199 + +2.8
284,201 + +1.7
284,202 - +0.5
284,202 - -1.4
284,204 + -0.4
284,204 + -0.0
284,207 - -0.0
284,212 - -0.5
284,281 + -0.4
284,289 - -0.6
284,291 - -4.2
284,293 + -1.9
284,298 + -0.6
284,311 - +0.3
284,312 + -1.2
284,320 - -2.4
284,322 - -0.6
284,331 + +0.6
284,370 + MPMX20_00267 0.10 -1.0
284,439 + MPMX20_00267 0.17 +0.5
284,447 - MPMX20_00267 0.18 +1.4
284,482 - MPMX20_00267 0.22 +0.6
284,482 - MPMX20_00267 0.22 -1.2
284,503 + MPMX20_00267 0.24 +0.4
284,511 - MPMX20_00267 0.25 +1.0
284,511 - MPMX20_00267 0.25 -0.0
284,511 - MPMX20_00267 0.25 -3.6
284,545 + MPMX20_00267 0.28 -0.4
284,600 - MPMX20_00267 0.34 +1.0
284,614 - MPMX20_00267 0.35 +0.4
284,614 - MPMX20_00267 0.35 -2.5
284,614 - MPMX20_00267 0.35 -2.0
284,643 + MPMX20_00267 0.38 -1.6
284,651 + MPMX20_00267 0.39 +0.1
284,678 + MPMX20_00267 0.42 -1.1
284,699 + MPMX20_00267 0.44 +2.0
284,707 - MPMX20_00267 0.45 +0.4
284,707 - MPMX20_00267 0.45 +1.5
284,707 - MPMX20_00267 0.45 +0.1
284,730 + MPMX20_00267 0.47 +0.8
284,734 + MPMX20_00267 0.47 +0.4
284,773 + MPMX20_00267 0.51 -3.3
284,786 - MPMX20_00267 0.53 -2.4
284,788 + MPMX20_00267 0.53 -1.6
284,788 + MPMX20_00267 0.53 -1.8
284,788 + MPMX20_00267 0.53 -2.8
284,796 - MPMX20_00267 0.54 +0.8
284,796 - MPMX20_00267 0.54 -0.2
284,796 - MPMX20_00267 0.54 +0.8
284,796 - MPMX20_00267 0.54 +4.0
284,840 - MPMX20_00267 0.58 -2.6
284,857 + MPMX20_00267 0.60 -1.0
284,857 + MPMX20_00267 0.60 +0.3
284,857 + MPMX20_00267 0.60 +1.0
284,868 + MPMX20_00267 0.61 -1.1
284,868 + MPMX20_00267 0.61 -1.7
284,877 - MPMX20_00267 0.62 +0.4
284,964 - MPMX20_00267 0.71 +1.2
284,995 + MPMX20_00267 0.74 -0.2
285,000 + MPMX20_00267 0.74 +0.1
285,045 - MPMX20_00267 0.79 -1.3

Or see this region's nucleotide sequence