Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03768

Experiment: TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03767 and MPMX20_03768 are separated by 25 nucleotidesMPMX20_03768 and MPMX20_03769 are separated by 161 nucleotidesMPMX20_03769 and MPMX20_03770 are separated by 250 nucleotides MPMX20_03767: MPMX20_03767 - Xaa-Pro aminopeptidase, at 3,970,587 to 3,971,906 _03767 MPMX20_03768: MPMX20_03768 - hypothetical protein, at 3,971,932 to 3,972,516 _03768 MPMX20_03769: MPMX20_03769 - Cell division protein ZapA, at 3,972,678 to 3,973,007 _03769 MPMX20_03770: MPMX20_03770 - 5-formyltetrahydrofolate cyclo-ligase, at 3,973,258 to 3,973,854 _03770 Position (kb) 3971 3972 3973Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3970.932 kb on - strand, within MPMX20_03767at 3971.042 kb on - strand, within MPMX20_03767at 3971.042 kb on - strand, within MPMX20_03767at 3971.042 kb on - strand, within MPMX20_03767at 3971.042 kb on - strand, within MPMX20_03767at 3971.042 kb on - strand, within MPMX20_03767at 3971.059 kb on - strand, within MPMX20_03767at 3971.144 kb on - strand, within MPMX20_03767at 3971.186 kb on - strand, within MPMX20_03767at 3971.277 kb on - strand, within MPMX20_03767at 3971.345 kb on - strand, within MPMX20_03767at 3971.463 kb on - strand, within MPMX20_03767at 3971.539 kb on - strand, within MPMX20_03767at 3971.604 kb on - strand, within MPMX20_03767at 3971.627 kb on - strand, within MPMX20_03767at 3971.849 kb on - strandat 3971.918 kb on - strandat 3971.923 kb on - strandat 3972.087 kb on - strand, within MPMX20_03768at 3972.090 kb on - strand, within MPMX20_03768at 3972.092 kb on + strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.100 kb on - strand, within MPMX20_03768at 3972.192 kb on - strand, within MPMX20_03768at 3972.218 kb on + strand, within MPMX20_03768at 3972.233 kb on + strand, within MPMX20_03768at 3972.233 kb on - strand, within MPMX20_03768at 3972.241 kb on - strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.311 kb on + strand, within MPMX20_03768at 3972.319 kb on - strand, within MPMX20_03768at 3972.319 kb on - strand, within MPMX20_03768at 3972.344 kb on + strand, within MPMX20_03768at 3972.407 kb on + strand, within MPMX20_03768at 3972.407 kb on + strand, within MPMX20_03768at 3972.408 kb on - strand, within MPMX20_03768at 3972.436 kb on + strand, within MPMX20_03768at 3972.436 kb on + strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.444 kb on - strand, within MPMX20_03768at 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.501 kb on + strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.509 kb on - strandat 3972.566 kb on + strandat 3972.583 kb on + strandat 3972.604 kb on - strandat 3972.638 kb on - strandat 3972.650 kb on - strandat 3972.655 kb on + strandat 3972.672 kb on + strandat 3972.673 kb on - strandat 3972.692 kb on - strandat 3972.749 kb on - strand, within MPMX20_03769at 3972.862 kb on + strand, within MPMX20_03769at 3972.910 kb on + strand, within MPMX20_03769at 3972.910 kb on + strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.953 kb on + strand, within MPMX20_03769at 3972.961 kb on - strand, within MPMX20_03769at 3973.088 kb on - strandat 3973.207 kb on - strandat 3973.342 kb on - strand, within MPMX20_03770at 3973.388 kb on + strand, within MPMX20_03770at 3973.417 kb on + strand, within MPMX20_03770at 3973.470 kb on + strand, within MPMX20_03770

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027
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3,970,932 - MPMX20_03767 0.26 -1.6
3,971,042 - MPMX20_03767 0.34 +0.7
3,971,042 - MPMX20_03767 0.34 -0.6
3,971,042 - MPMX20_03767 0.34 +2.1
3,971,042 - MPMX20_03767 0.34 +0.1
3,971,042 - MPMX20_03767 0.34 -1.2
3,971,059 - MPMX20_03767 0.36 -0.3
3,971,144 - MPMX20_03767 0.42 -1.3
3,971,186 - MPMX20_03767 0.45 +0.5
3,971,277 - MPMX20_03767 0.52 -3.0
3,971,345 - MPMX20_03767 0.57 +2.5
3,971,463 - MPMX20_03767 0.66 -2.0
3,971,539 - MPMX20_03767 0.72 -0.9
3,971,604 - MPMX20_03767 0.77 -0.5
3,971,627 - MPMX20_03767 0.79 +0.3
3,971,849 - -3.4
3,971,918 - +0.1
3,971,923 - -0.4
3,972,087 - MPMX20_03768 0.26 -0.1
3,972,090 - MPMX20_03768 0.27 -0.3
3,972,092 + MPMX20_03768 0.27 -0.1
3,972,100 - MPMX20_03768 0.29 -2.5
3,972,100 - MPMX20_03768 0.29 -0.5
3,972,100 - MPMX20_03768 0.29 +1.3
3,972,100 - MPMX20_03768 0.29 -4.2
3,972,192 - MPMX20_03768 0.44 -0.4
3,972,218 + MPMX20_03768 0.49 -3.0
3,972,233 + MPMX20_03768 0.51 +1.1
3,972,233 - MPMX20_03768 0.51 -0.6
3,972,241 - MPMX20_03768 0.53 -0.9
3,972,311 + MPMX20_03768 0.65 -0.3
3,972,311 + MPMX20_03768 0.65 -1.4
3,972,311 + MPMX20_03768 0.65 +0.8
3,972,319 - MPMX20_03768 0.66 -2.3
3,972,319 - MPMX20_03768 0.66 -1.3
3,972,344 + MPMX20_03768 0.70 +0.7
3,972,407 + MPMX20_03768 0.81 -2.3
3,972,407 + MPMX20_03768 0.81 -2.5
3,972,408 - MPMX20_03768 0.81 +0.3
3,972,436 + MPMX20_03768 0.86 -0.0
3,972,436 + MPMX20_03768 0.86 -0.6
3,972,444 - MPMX20_03768 0.88 +0.3
3,972,444 - MPMX20_03768 0.88 -2.9
3,972,444 - MPMX20_03768 0.88 +1.4
3,972,444 - MPMX20_03768 0.88 +3.1
3,972,444 - MPMX20_03768 0.88 -0.5
3,972,501 + +0.7
3,972,501 + +1.5
3,972,501 + -2.1
3,972,501 + -2.0
3,972,501 + +0.8
3,972,501 + -2.0
3,972,501 + -1.2
3,972,501 + -2.6
3,972,501 + -0.5
3,972,501 + +0.3
3,972,501 + -0.3
3,972,501 + +2.4
3,972,501 + +1.5
3,972,501 + -2.8
3,972,501 + -1.1
3,972,501 + -0.4
3,972,501 + -0.5
3,972,509 - -0.2
3,972,509 - -1.2
3,972,509 - +1.3
3,972,509 - -1.5
3,972,509 - -0.9
3,972,509 - +2.1
3,972,509 - -0.6
3,972,566 + -1.0
3,972,583 + -0.2
3,972,604 - -0.7
3,972,638 - -3.1
3,972,650 - -0.2
3,972,655 + +0.8
3,972,672 + +2.1
3,972,673 - -0.1
3,972,692 - -0.2
3,972,749 - MPMX20_03769 0.22 -0.7
3,972,862 + MPMX20_03769 0.56 +1.5
3,972,910 + MPMX20_03769 0.70 -2.1
3,972,910 + MPMX20_03769 0.70 -2.1
3,972,918 - MPMX20_03769 0.73 +0.8
3,972,918 - MPMX20_03769 0.73 -0.3
3,972,953 + MPMX20_03769 0.83 +0.8
3,972,961 - MPMX20_03769 0.86 -1.0
3,973,088 - -3.1
3,973,207 - -1.3
3,973,342 - MPMX20_03770 0.14 +1.8
3,973,388 + MPMX20_03770 0.22 -0.2
3,973,417 + MPMX20_03770 0.27 +1.4
3,973,470 + MPMX20_03770 0.36 -0.7

Or see this region's nucleotide sequence