Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02152

Experiment: TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02151 and MPMX20_02152 are separated by 26 nucleotidesMPMX20_02152 and MPMX20_02153 are separated by 138 nucleotides MPMX20_02151: MPMX20_02151 - 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase, at 2,242,849 to 2,244,054 _02151 MPMX20_02152: MPMX20_02152 - Phenylacetate-coenzyme A ligase, at 2,244,081 to 2,245,397 _02152 MPMX20_02153: MPMX20_02153 - Transcriptional repressor PaaX, at 2,245,536 to 2,246,462 _02153 Position (kb) 2244 2245 2246Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2243.087 kb on - strand, within MPMX20_02151at 2243.097 kb on - strand, within MPMX20_02151at 2243.120 kb on + strand, within MPMX20_02151at 2243.128 kb on - strand, within MPMX20_02151at 2243.154 kb on + strand, within MPMX20_02151at 2243.229 kb on + strand, within MPMX20_02151at 2243.237 kb on - strand, within MPMX20_02151at 2243.286 kb on - strand, within MPMX20_02151at 2243.526 kb on - strand, within MPMX20_02151at 2243.548 kb on - strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.614 kb on - strand, within MPMX20_02151at 2243.666 kb on + strand, within MPMX20_02151at 2243.672 kb on + strand, within MPMX20_02151at 2243.680 kb on - strand, within MPMX20_02151at 2243.733 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.804 kb on + strand, within MPMX20_02151at 2243.883 kb on + strand, within MPMX20_02151at 2243.941 kb on + strandat 2243.946 kb on + strandat 2243.987 kb on + strandat 2244.002 kb on - strandat 2244.005 kb on - strandat 2244.006 kb on + strandat 2244.006 kb on + strandat 2244.013 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.027 kb on - strandat 2244.027 kb on - strandat 2244.027 kb on - strandat 2244.105 kb on - strandat 2244.130 kb on + strandat 2244.170 kb on + strandat 2244.178 kb on - strandat 2244.229 kb on + strand, within MPMX20_02152at 2244.277 kb on + strand, within MPMX20_02152at 2244.283 kb on + strand, within MPMX20_02152at 2244.283 kb on + strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.290 kb on - strand, within MPMX20_02152at 2244.291 kb on - strand, within MPMX20_02152at 2244.291 kb on - strand, within MPMX20_02152at 2244.346 kb on - strand, within MPMX20_02152at 2244.348 kb on + strand, within MPMX20_02152at 2244.367 kb on + strand, within MPMX20_02152at 2244.377 kb on + strand, within MPMX20_02152at 2244.391 kb on + strand, within MPMX20_02152at 2244.418 kb on + strand, within MPMX20_02152at 2244.439 kb on - strand, within MPMX20_02152at 2244.508 kb on - strand, within MPMX20_02152at 2244.508 kb on - strand, within MPMX20_02152at 2244.524 kb on + strand, within MPMX20_02152at 2244.643 kb on + strand, within MPMX20_02152at 2244.674 kb on + strand, within MPMX20_02152at 2244.806 kb on + strand, within MPMX20_02152at 2244.947 kb on - strand, within MPMX20_02152at 2244.949 kb on - strand, within MPMX20_02152at 2244.956 kb on + strand, within MPMX20_02152at 2244.964 kb on - strand, within MPMX20_02152at 2244.999 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152at 2245.094 kb on + strand, within MPMX20_02152at 2245.139 kb on + strand, within MPMX20_02152at 2245.222 kb on + strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.266 kb on - strandat 2245.266 kb on - strandat 2245.266 kb on - strandat 2245.290 kb on + strandat 2245.354 kb on - strandat 2245.354 kb on - strandat 2245.408 kb on + strandat 2245.427 kb on + strandat 2245.470 kb on - strandat 2245.506 kb on - strandat 2245.552 kb on + strandat 2245.560 kb on - strandat 2245.560 kb on - strandat 2245.560 kb on - strandat 2245.578 kb on + strandat 2245.689 kb on - strand, within MPMX20_02153at 2245.713 kb on + strand, within MPMX20_02153at 2245.820 kb on + strand, within MPMX20_02153at 2245.841 kb on + strand, within MPMX20_02153at 2245.844 kb on + strand, within MPMX20_02153at 2246.097 kb on - strand, within MPMX20_02153at 2246.266 kb on - strand, within MPMX20_02153at 2246.283 kb on + strand, within MPMX20_02153at 2246.293 kb on - strand, within MPMX20_02153at 2246.306 kb on - strand, within MPMX20_02153at 2246.308 kb on + strand, within MPMX20_02153at 2246.322 kb on - strand, within MPMX20_02153at 2246.385 kb on + strandat 2246.393 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027
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2,243,087 - MPMX20_02151 0.20 +0.9
2,243,097 - MPMX20_02151 0.21 -1.3
2,243,120 + MPMX20_02151 0.22 -0.8
2,243,128 - MPMX20_02151 0.23 -0.4
2,243,154 + MPMX20_02151 0.25 -0.3
2,243,229 + MPMX20_02151 0.32 -1.9
2,243,237 - MPMX20_02151 0.32 -1.0
2,243,286 - MPMX20_02151 0.36 -1.2
2,243,526 - MPMX20_02151 0.56 +1.3
2,243,548 - MPMX20_02151 0.58 -0.5
2,243,606 + MPMX20_02151 0.63 -2.5
2,243,606 + MPMX20_02151 0.63 -1.0
2,243,614 - MPMX20_02151 0.63 -1.6
2,243,666 + MPMX20_02151 0.68 +0.5
2,243,672 + MPMX20_02151 0.68 -0.7
2,243,680 - MPMX20_02151 0.69 -0.6
2,243,733 - MPMX20_02151 0.73 +0.0
2,243,743 - MPMX20_02151 0.74 -1.8
2,243,743 - MPMX20_02151 0.74 -0.3
2,243,804 + MPMX20_02151 0.79 -2.8
2,243,883 + MPMX20_02151 0.86 -1.7
2,243,941 + +0.0
2,243,946 + -0.4
2,243,987 + +0.6
2,244,002 - -0.8
2,244,005 - -1.7
2,244,006 + -0.0
2,244,006 + +1.5
2,244,013 + -0.4
2,244,019 + +1.5
2,244,019 + -0.5
2,244,019 + -1.8
2,244,019 + +2.0
2,244,027 - -0.7
2,244,027 - -1.3
2,244,027 - -3.0
2,244,105 - +0.2
2,244,130 + -1.4
2,244,170 + -1.7
2,244,178 - -2.1
2,244,229 + MPMX20_02152 0.11 -0.4
2,244,277 + MPMX20_02152 0.15 -1.3
2,244,283 + MPMX20_02152 0.15 +2.3
2,244,283 + MPMX20_02152 0.15 +0.4
2,244,285 - MPMX20_02152 0.15 +0.9
2,244,285 - MPMX20_02152 0.15 +0.1
2,244,285 - MPMX20_02152 0.15 +0.9
2,244,290 - MPMX20_02152 0.16 -0.0
2,244,291 - MPMX20_02152 0.16 -1.3
2,244,291 - MPMX20_02152 0.16 +0.2
2,244,346 - MPMX20_02152 0.20 -1.8
2,244,348 + MPMX20_02152 0.20 -0.5
2,244,367 + MPMX20_02152 0.22 -0.5
2,244,377 + MPMX20_02152 0.22 -1.4
2,244,391 + MPMX20_02152 0.24 -1.5
2,244,418 + MPMX20_02152 0.26 -1.7
2,244,439 - MPMX20_02152 0.27 -2.3
2,244,508 - MPMX20_02152 0.32 -2.4
2,244,508 - MPMX20_02152 0.32 -0.4
2,244,524 + MPMX20_02152 0.34 -1.0
2,244,643 + MPMX20_02152 0.43 +0.0
2,244,674 + MPMX20_02152 0.45 +0.5
2,244,806 + MPMX20_02152 0.55 -2.3
2,244,947 - MPMX20_02152 0.66 -3.1
2,244,949 - MPMX20_02152 0.66 +0.3
2,244,956 + MPMX20_02152 0.66 -2.2
2,244,964 - MPMX20_02152 0.67 -0.5
2,244,999 - MPMX20_02152 0.70 -2.2
2,245,021 - MPMX20_02152 0.71 -0.5
2,245,021 - MPMX20_02152 0.71 +1.3
2,245,094 + MPMX20_02152 0.77 +0.5
2,245,139 + MPMX20_02152 0.80 +1.1
2,245,222 + MPMX20_02152 0.87 -1.4
2,245,230 - MPMX20_02152 0.87 -2.3
2,245,230 - MPMX20_02152 0.87 -1.3
2,245,230 - MPMX20_02152 0.87 -0.8
2,245,258 + MPMX20_02152 0.89 -2.1
2,245,258 + MPMX20_02152 0.89 +0.7
2,245,258 + MPMX20_02152 0.89 -0.5
2,245,266 - -0.9
2,245,266 - -0.8
2,245,266 - -0.7
2,245,290 + -0.8
2,245,354 - +2.0
2,245,354 - -0.3
2,245,408 + -1.9
2,245,427 + -1.3
2,245,470 - -1.0
2,245,506 - -0.6
2,245,552 + +1.5
2,245,560 - +0.3
2,245,560 - -1.0
2,245,560 - -1.1
2,245,578 + -0.8
2,245,689 - MPMX20_02153 0.17 +2.8
2,245,713 + MPMX20_02153 0.19 -0.3
2,245,820 + MPMX20_02153 0.31 +0.5
2,245,841 + MPMX20_02153 0.33 +1.6
2,245,844 + MPMX20_02153 0.33 -2.1
2,246,097 - MPMX20_02153 0.61 -2.0
2,246,266 - MPMX20_02153 0.79 +1.0
2,246,283 + MPMX20_02153 0.81 -0.7
2,246,293 - MPMX20_02153 0.82 -1.0
2,246,306 - MPMX20_02153 0.83 +0.2
2,246,308 + MPMX20_02153 0.83 -1.2
2,246,322 - MPMX20_02153 0.85 -0.2
2,246,385 + -0.7
2,246,393 - +0.2

Or see this region's nucleotide sequence