Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00183

Experiment: TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00181 and MPMX20_00182 are separated by 124 nucleotidesMPMX20_00182 and MPMX20_00183 are separated by 164 nucleotidesMPMX20_00183 and MPMX20_00184 overlap by 32 nucleotidesMPMX20_00184 and MPMX20_00185 overlap by 23 nucleotides MPMX20_00181: MPMX20_00181 - HTH-type transcriptional regulator KdgR, at 188,089 to 189,105 _00181 MPMX20_00182: MPMX20_00182 - putative lipoprotein YiaD, at 189,230 to 189,892 _00182 MPMX20_00183: MPMX20_00183 - Biotin sulfoxide reductase, at 190,057 to 192,384 _00183 MPMX20_00184: MPMX20_00184 - Peptidyl-lysine N-acetyltransferase YiaC, at 192,353 to 192,793 _00184 MPMX20_00185: MPMX20_00185 - DNA-3-methyladenine glycosylase 1, at 192,771 to 193,352 _00185 Position (kb) 190 191 192 193Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 189.090 kb on + strandat 189.090 kb on + strandat 189.130 kb on + strandat 189.173 kb on - strandat 189.208 kb on + strandat 189.208 kb on + strandat 189.221 kb on + strandat 189.266 kb on + strandat 189.266 kb on + strandat 189.266 kb on + strandat 189.274 kb on - strandat 189.278 kb on + strandat 189.402 kb on - strand, within MPMX20_00182at 189.410 kb on + strand, within MPMX20_00182at 189.470 kb on - strand, within MPMX20_00182at 189.470 kb on - strand, within MPMX20_00182at 189.505 kb on - strand, within MPMX20_00182at 189.505 kb on - strand, within MPMX20_00182at 189.506 kb on - strand, within MPMX20_00182at 189.519 kb on + strand, within MPMX20_00182at 189.522 kb on - strand, within MPMX20_00182at 189.531 kb on + strand, within MPMX20_00182at 189.542 kb on + strand, within MPMX20_00182at 189.566 kb on + strand, within MPMX20_00182at 189.639 kb on - strand, within MPMX20_00182at 189.671 kb on + strand, within MPMX20_00182at 189.671 kb on + strand, within MPMX20_00182at 189.671 kb on + strand, within MPMX20_00182at 189.671 kb on + strand, within MPMX20_00182at 189.671 kb on + strand, within MPMX20_00182at 189.674 kb on - strand, within MPMX20_00182at 189.676 kb on + strand, within MPMX20_00182at 189.676 kb on + strand, within MPMX20_00182at 189.676 kb on + strand, within MPMX20_00182at 189.676 kb on + strand, within MPMX20_00182at 189.676 kb on + strand, within MPMX20_00182at 189.679 kb on - strand, within MPMX20_00182at 189.751 kb on - strand, within MPMX20_00182at 189.751 kb on - strand, within MPMX20_00182at 189.756 kb on - strand, within MPMX20_00182at 189.761 kb on - strand, within MPMX20_00182at 189.761 kb on - strand, within MPMX20_00182at 189.767 kb on + strand, within MPMX20_00182at 189.767 kb on + strand, within MPMX20_00182at 189.775 kb on - strand, within MPMX20_00182at 189.775 kb on - strand, within MPMX20_00182at 189.788 kb on + strand, within MPMX20_00182at 189.813 kb on + strand, within MPMX20_00182at 189.813 kb on + strand, within MPMX20_00182at 189.813 kb on + strand, within MPMX20_00182at 189.813 kb on + strand, within MPMX20_00182at 189.813 kb on + strand, within MPMX20_00182at 189.820 kb on + strand, within MPMX20_00182at 189.821 kb on - strand, within MPMX20_00182at 189.821 kb on - strand, within MPMX20_00182at 189.823 kb on + strand, within MPMX20_00182at 189.833 kb on + strandat 189.837 kb on + strandat 189.847 kb on + strandat 189.852 kb on + strandat 189.852 kb on + strandat 189.855 kb on - strandat 189.857 kb on + strandat 189.860 kb on - strandat 189.937 kb on - strandat 190.007 kb on - strandat 190.008 kb on - strandat 190.022 kb on - strandat 190.054 kb on + strandat 190.054 kb on + strandat 190.054 kb on + strandat 190.054 kb on + strandat 190.054 kb on + strandat 190.057 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.062 kb on - strandat 190.167 kb on + strandat 190.256 kb on + strandat 190.272 kb on + strandat 190.339 kb on - strand, within MPMX20_00183at 190.349 kb on - strand, within MPMX20_00183at 190.361 kb on + strand, within MPMX20_00183at 190.361 kb on + strand, within MPMX20_00183at 190.369 kb on - strand, within MPMX20_00183at 190.389 kb on + strand, within MPMX20_00183at 190.419 kb on + strand, within MPMX20_00183at 190.419 kb on + strand, within MPMX20_00183at 190.427 kb on - strand, within MPMX20_00183at 190.427 kb on - strand, within MPMX20_00183at 190.427 kb on - strand, within MPMX20_00183at 190.427 kb on - strand, within MPMX20_00183at 190.427 kb on - strand, within MPMX20_00183at 190.448 kb on + strand, within MPMX20_00183at 190.456 kb on - strand, within MPMX20_00183at 190.485 kb on + strand, within MPMX20_00183at 190.499 kb on + strand, within MPMX20_00183at 190.512 kb on - strand, within MPMX20_00183at 190.521 kb on - strand, within MPMX20_00183at 190.543 kb on - strand, within MPMX20_00183at 190.600 kb on - strand, within MPMX20_00183at 190.662 kb on - strand, within MPMX20_00183at 190.709 kb on + strand, within MPMX20_00183at 190.722 kb on - strand, within MPMX20_00183at 190.722 kb on - strand, within MPMX20_00183at 190.789 kb on - strand, within MPMX20_00183at 190.798 kb on + strand, within MPMX20_00183at 190.805 kb on + strand, within MPMX20_00183at 190.841 kb on + strand, within MPMX20_00183at 190.841 kb on + strand, within MPMX20_00183at 190.862 kb on + strand, within MPMX20_00183at 190.904 kb on + strand, within MPMX20_00183at 190.933 kb on - strand, within MPMX20_00183at 191.016 kb on + strand, within MPMX20_00183at 191.067 kb on - strand, within MPMX20_00183at 191.125 kb on - strand, within MPMX20_00183at 191.192 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.197 kb on + strand, within MPMX20_00183at 191.205 kb on - strand, within MPMX20_00183at 191.205 kb on - strand, within MPMX20_00183at 191.205 kb on - strand, within MPMX20_00183at 191.205 kb on - strand, within MPMX20_00183at 191.205 kb on - strand, within MPMX20_00183at 191.253 kb on - strand, within MPMX20_00183at 191.280 kb on + strand, within MPMX20_00183at 191.398 kb on - strand, within MPMX20_00183at 191.398 kb on - strand, within MPMX20_00183at 191.426 kb on - strand, within MPMX20_00183at 191.517 kb on + strand, within MPMX20_00183at 191.570 kb on + strand, within MPMX20_00183at 191.644 kb on + strand, within MPMX20_00183at 191.685 kb on + strand, within MPMX20_00183at 191.692 kb on + strand, within MPMX20_00183at 191.727 kb on + strand, within MPMX20_00183at 191.727 kb on + strand, within MPMX20_00183at 191.727 kb on + strand, within MPMX20_00183at 191.727 kb on + strand, within MPMX20_00183at 191.735 kb on - strand, within MPMX20_00183at 191.735 kb on - strand, within MPMX20_00183at 191.790 kb on - strand, within MPMX20_00183at 191.894 kb on + strand, within MPMX20_00183at 191.926 kb on - strand, within MPMX20_00183at 191.936 kb on + strand, within MPMX20_00183at 191.983 kb on - strand, within MPMX20_00183at 192.055 kb on + strand, within MPMX20_00183at 192.055 kb on + strand, within MPMX20_00183at 192.055 kb on + strand, within MPMX20_00183at 192.058 kb on - strand, within MPMX20_00183at 192.060 kb on + strand, within MPMX20_00183at 192.063 kb on - strand, within MPMX20_00183at 192.063 kb on - strand, within MPMX20_00183at 192.065 kb on + strand, within MPMX20_00183at 192.162 kb on + strandat 192.169 kb on - strandat 192.169 kb on - strandat 192.200 kb on + strandat 192.206 kb on + strandat 192.214 kb on - strandat 192.214 kb on - strandat 192.258 kb on + strandat 192.273 kb on - strandat 192.275 kb on + strandat 192.310 kb on + strandat 192.315 kb on + strandat 192.315 kb on + strandat 192.318 kb on - strandat 192.410 kb on - strand, within MPMX20_00184at 192.519 kb on + strand, within MPMX20_00184at 192.519 kb on + strand, within MPMX20_00184at 192.521 kb on + strand, within MPMX20_00184at 192.529 kb on + strand, within MPMX20_00184at 192.529 kb on - strand, within MPMX20_00184at 192.585 kb on + strand, within MPMX20_00184at 192.585 kb on + strand, within MPMX20_00184at 192.603 kb on - strand, within MPMX20_00184at 192.661 kb on + strand, within MPMX20_00184at 192.669 kb on - strand, within MPMX20_00184at 192.669 kb on - strand, within MPMX20_00184at 192.669 kb on - strand, within MPMX20_00184at 192.684 kb on - strand, within MPMX20_00184at 192.691 kb on + strand, within MPMX20_00184at 192.699 kb on - strand, within MPMX20_00184at 192.724 kb on + strand, within MPMX20_00184at 192.774 kb on - strandat 192.801 kb on + strandat 192.803 kb on - strandat 192.842 kb on + strand, within MPMX20_00185at 192.842 kb on + strand, within MPMX20_00185at 192.842 kb on + strand, within MPMX20_00185at 192.850 kb on - strand, within MPMX20_00185at 192.850 kb on - strand, within MPMX20_00185at 192.850 kb on - strand, within MPMX20_00185at 192.850 kb on - strand, within MPMX20_00185at 192.854 kb on + strand, within MPMX20_00185at 192.854 kb on + strand, within MPMX20_00185at 192.854 kb on + strand, within MPMX20_00185at 192.862 kb on - strand, within MPMX20_00185at 192.862 kb on - strand, within MPMX20_00185at 192.870 kb on - strand, within MPMX20_00185at 192.910 kb on + strand, within MPMX20_00185at 192.910 kb on + strand, within MPMX20_00185at 192.910 kb on + strand, within MPMX20_00185at 192.910 kb on + strand, within MPMX20_00185at 192.918 kb on - strand, within MPMX20_00185at 192.918 kb on - strand, within MPMX20_00185at 193.022 kb on + strand, within MPMX20_00185at 193.169 kb on + strand, within MPMX20_00185at 193.216 kb on - strand, within MPMX20_00185at 193.229 kb on + strand, within MPMX20_00185at 193.230 kb on + strand, within MPMX20_00185at 193.237 kb on - strand, within MPMX20_00185at 193.238 kb on + strand, within MPMX20_00185at 193.270 kb on - strand, within MPMX20_00185at 193.288 kb on + strand, within MPMX20_00185at 193.288 kb on + strand, within MPMX20_00185at 193.290 kb on + strand, within MPMX20_00185at 193.296 kb on - strandat 193.312 kb on + strandat 193.320 kb on - strandat 193.322 kb on + strandat 193.339 kb on + strandat 193.339 kb on + strandat 193.349 kb on + strandat 193.370 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027
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189,090 + -0.1
189,090 + -0.8
189,130 + -1.3
189,173 - +0.8
189,208 + -1.5
189,208 + -1.0
189,221 + -1.6
189,266 + -1.1
189,266 + +0.6
189,266 + -0.5
189,274 - -2.5
189,278 + -1.6
189,402 - MPMX20_00182 0.26 +2.1
189,410 + MPMX20_00182 0.27 +0.3
189,470 - MPMX20_00182 0.36 +2.1
189,470 - MPMX20_00182 0.36 +0.1
189,505 - MPMX20_00182 0.41 -0.7
189,505 - MPMX20_00182 0.41 -0.8
189,506 - MPMX20_00182 0.42 -0.9
189,519 + MPMX20_00182 0.44 +0.2
189,522 - MPMX20_00182 0.44 -0.2
189,531 + MPMX20_00182 0.45 -1.6
189,542 + MPMX20_00182 0.47 +2.2
189,566 + MPMX20_00182 0.51 -0.4
189,639 - MPMX20_00182 0.62 -2.7
189,671 + MPMX20_00182 0.67 -2.7
189,671 + MPMX20_00182 0.67 -0.6
189,671 + MPMX20_00182 0.67 -0.1
189,671 + MPMX20_00182 0.67 +0.8
189,671 + MPMX20_00182 0.67 -0.3
189,674 - MPMX20_00182 0.67 -2.2
189,676 + MPMX20_00182 0.67 -1.7
189,676 + MPMX20_00182 0.67 -0.3
189,676 + MPMX20_00182 0.67 -2.9
189,676 + MPMX20_00182 0.67 +2.0
189,676 + MPMX20_00182 0.67 +1.5
189,679 - MPMX20_00182 0.68 -0.7
189,751 - MPMX20_00182 0.79 +1.7
189,751 - MPMX20_00182 0.79 -0.9
189,756 - MPMX20_00182 0.79 -2.1
189,761 - MPMX20_00182 0.80 -0.4
189,761 - MPMX20_00182 0.80 -1.1
189,767 + MPMX20_00182 0.81 +1.6
189,767 + MPMX20_00182 0.81 +0.1
189,775 - MPMX20_00182 0.82 +1.3
189,775 - MPMX20_00182 0.82 -0.6
189,788 + MPMX20_00182 0.84 -1.0
189,813 + MPMX20_00182 0.88 +0.2
189,813 + MPMX20_00182 0.88 -1.6
189,813 + MPMX20_00182 0.88 +2.1
189,813 + MPMX20_00182 0.88 +0.9
189,813 + MPMX20_00182 0.88 +0.1
189,820 + MPMX20_00182 0.89 -2.2
189,821 - MPMX20_00182 0.89 +1.3
189,821 - MPMX20_00182 0.89 -0.5
189,823 + MPMX20_00182 0.89 -2.0
189,833 + -0.3
189,837 + -2.3
189,847 + -1.3
189,852 + +1.2
189,852 + -0.5
189,855 - -1.7
189,857 + +0.5
189,860 - -0.7
189,937 - -2.5
190,007 - -1.4
190,008 - +0.4
190,022 - +0.5
190,054 + -0.5
190,054 + -0.8
190,054 + -1.3
190,054 + -0.4
190,054 + +0.4
190,057 - -1.9
190,062 - +1.9
190,062 - -1.5
190,062 - +0.2
190,062 - -0.6
190,062 - +1.1
190,062 - -0.1
190,062 - +2.1
190,167 + +1.1
190,256 + -1.6
190,272 + -1.2
190,339 - MPMX20_00183 0.12 +0.3
190,349 - MPMX20_00183 0.13 -2.2
190,361 + MPMX20_00183 0.13 -0.5
190,361 + MPMX20_00183 0.13 -0.6
190,369 - MPMX20_00183 0.13 -0.5
190,389 + MPMX20_00183 0.14 +0.6
190,419 + MPMX20_00183 0.16 -1.2
190,419 + MPMX20_00183 0.16 +0.3
190,427 - MPMX20_00183 0.16 +3.5
190,427 - MPMX20_00183 0.16 -0.3
190,427 - MPMX20_00183 0.16 -0.4
190,427 - MPMX20_00183 0.16 +2.6
190,427 - MPMX20_00183 0.16 +1.5
190,448 + MPMX20_00183 0.17 -2.1
190,456 - MPMX20_00183 0.17 -1.1
190,485 + MPMX20_00183 0.18 -1.9
190,499 + MPMX20_00183 0.19 -0.5
190,512 - MPMX20_00183 0.20 -0.4
190,521 - MPMX20_00183 0.20 +0.1
190,543 - MPMX20_00183 0.21 -0.4
190,600 - MPMX20_00183 0.23 -1.8
190,662 - MPMX20_00183 0.26 +0.9
190,709 + MPMX20_00183 0.28 +0.8
190,722 - MPMX20_00183 0.29 -1.1
190,722 - MPMX20_00183 0.29 -1.0
190,789 - MPMX20_00183 0.31 -4.0
190,798 + MPMX20_00183 0.32 -1.2
190,805 + MPMX20_00183 0.32 -0.9
190,841 + MPMX20_00183 0.34 +0.3
190,841 + MPMX20_00183 0.34 +1.6
190,862 + MPMX20_00183 0.35 +2.5
190,904 + MPMX20_00183 0.36 +1.3
190,933 - MPMX20_00183 0.38 -2.1
191,016 + MPMX20_00183 0.41 +0.9
191,067 - MPMX20_00183 0.43 +2.8
191,125 - MPMX20_00183 0.46 +4.3
191,192 + MPMX20_00183 0.49 -1.5
191,197 + MPMX20_00183 0.49 -1.1
191,197 + MPMX20_00183 0.49 +2.5
191,197 + MPMX20_00183 0.49 -1.0
191,197 + MPMX20_00183 0.49 -0.3
191,197 + MPMX20_00183 0.49 +1.9
191,197 + MPMX20_00183 0.49 +1.5
191,205 - MPMX20_00183 0.49 +0.9
191,205 - MPMX20_00183 0.49 +0.3
191,205 - MPMX20_00183 0.49 +3.7
191,205 - MPMX20_00183 0.49 +3.1
191,205 - MPMX20_00183 0.49 +1.5
191,253 - MPMX20_00183 0.51 +0.8
191,280 + MPMX20_00183 0.53 +0.9
191,398 - MPMX20_00183 0.58 -0.5
191,398 - MPMX20_00183 0.58 -0.4
191,426 - MPMX20_00183 0.59 +1.9
191,517 + MPMX20_00183 0.63 +0.4
191,570 + MPMX20_00183 0.65 +0.9
191,644 + MPMX20_00183 0.68 -0.7
191,685 + MPMX20_00183 0.70 -0.5
191,692 + MPMX20_00183 0.70 +0.9
191,727 + MPMX20_00183 0.72 +0.6
191,727 + MPMX20_00183 0.72 -0.2
191,727 + MPMX20_00183 0.72 -0.7
191,727 + MPMX20_00183 0.72 -0.7
191,735 - MPMX20_00183 0.72 -0.5
191,735 - MPMX20_00183 0.72 -0.9
191,790 - MPMX20_00183 0.74 -0.1
191,894 + MPMX20_00183 0.79 +1.4
191,926 - MPMX20_00183 0.80 +1.0
191,936 + MPMX20_00183 0.81 -0.8
191,983 - MPMX20_00183 0.83 +1.8
192,055 + MPMX20_00183 0.86 -1.2
192,055 + MPMX20_00183 0.86 -0.7
192,055 + MPMX20_00183 0.86 +0.8
192,058 - MPMX20_00183 0.86 +1.6
192,060 + MPMX20_00183 0.86 +1.3
192,063 - MPMX20_00183 0.86 -1.5
192,063 - MPMX20_00183 0.86 +1.6
192,065 + MPMX20_00183 0.86 +3.1
192,162 + +1.7
192,169 - +0.2
192,169 - -0.5
192,200 + +0.4
192,206 + -1.8
192,214 - -0.3
192,214 - +0.4
192,258 + -1.5
192,273 - +2.6
192,275 + +0.6
192,310 + -2.4
192,315 + -0.1
192,315 + -2.0
192,318 - -1.7
192,410 - MPMX20_00184 0.13 +0.4
192,519 + MPMX20_00184 0.38 +5.1
192,519 + MPMX20_00184 0.38 -1.5
192,521 + MPMX20_00184 0.38 +1.2
192,529 + MPMX20_00184 0.40 -2.0
192,529 - MPMX20_00184 0.40 +0.1
192,585 + MPMX20_00184 0.53 +0.8
192,585 + MPMX20_00184 0.53 +0.3
192,603 - MPMX20_00184 0.57 +1.1
192,661 + MPMX20_00184 0.70 -0.1
192,669 - MPMX20_00184 0.72 +3.2
192,669 - MPMX20_00184 0.72 -0.1
192,669 - MPMX20_00184 0.72 +0.4
192,684 - MPMX20_00184 0.75 -0.4
192,691 + MPMX20_00184 0.77 +0.2
192,699 - MPMX20_00184 0.78 -0.7
192,724 + MPMX20_00184 0.84 -1.5
192,774 - +0.4
192,801 + -3.0
192,803 - -0.9
192,842 + MPMX20_00185 0.12 +0.5
192,842 + MPMX20_00185 0.12 -1.0
192,842 + MPMX20_00185 0.12 +1.5
192,850 - MPMX20_00185 0.14 -1.2
192,850 - MPMX20_00185 0.14 -3.0
192,850 - MPMX20_00185 0.14 -1.7
192,850 - MPMX20_00185 0.14 -0.2
192,854 + MPMX20_00185 0.14 +0.8
192,854 + MPMX20_00185 0.14 -1.8
192,854 + MPMX20_00185 0.14 -2.4
192,862 - MPMX20_00185 0.16 +4.8
192,862 - MPMX20_00185 0.16 +1.8
192,870 - MPMX20_00185 0.17 -0.3
192,910 + MPMX20_00185 0.24 -0.7
192,910 + MPMX20_00185 0.24 -1.1
192,910 + MPMX20_00185 0.24 +1.1
192,910 + MPMX20_00185 0.24 +0.8
192,918 - MPMX20_00185 0.25 +0.8
192,918 - MPMX20_00185 0.25 -3.0
193,022 + MPMX20_00185 0.43 +0.1
193,169 + MPMX20_00185 0.68 -1.1
193,216 - MPMX20_00185 0.76 -0.3
193,229 + MPMX20_00185 0.79 +1.1
193,230 + MPMX20_00185 0.79 -0.1
193,237 - MPMX20_00185 0.80 -1.5
193,238 + MPMX20_00185 0.80 +2.1
193,270 - MPMX20_00185 0.86 +1.3
193,288 + MPMX20_00185 0.89 -0.4
193,288 + MPMX20_00185 0.89 +0.5
193,290 + MPMX20_00185 0.89 -3.5
193,296 - +1.1
193,312 + +0.5
193,320 - -0.8
193,322 + +1.5
193,339 + -0.5
193,339 + -0.6
193,349 + -1.7
193,370 - -1.5

Or see this region's nucleotide sequence