Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00247

Experiment: LB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00245 and MPMX20_00246 are separated by 38 nucleotidesMPMX20_00246 and MPMX20_00247 are separated by 8 nucleotidesMPMX20_00247 and MPMX20_00248 are separated by 132 nucleotidesMPMX20_00248 and MPMX20_00249 are separated by 96 nucleotides MPMX20_00245: MPMX20_00245 - hypothetical protein, at 261,603 to 263,699 _00245 MPMX20_00246: MPMX20_00246 - dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase, at 263,738 to 264,193 _00246 MPMX20_00247: MPMX20_00247 - hypothetical protein, at 264,202 to 264,714 _00247 MPMX20_00248: MPMX20_00248 - Protein PsiE, at 264,847 to 265,257 _00248 MPMX20_00249: MPMX20_00249 - Maltose/maltodextrin transport system permease protein MalG, at 265,354 to 266,244 _00249 Position (kb) 264 265Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 263.212 kb on + strand, within MPMX20_00245at 263.272 kb on + strand, within MPMX20_00245at 263.280 kb on - strand, within MPMX20_00245at 263.354 kb on + strand, within MPMX20_00245at 263.356 kb on + strand, within MPMX20_00245at 263.395 kb on - strand, within MPMX20_00245at 263.420 kb on + strand, within MPMX20_00245at 263.428 kb on - strand, within MPMX20_00245at 263.443 kb on + strand, within MPMX20_00245at 263.521 kb on - strandat 263.538 kb on + strandat 263.559 kb on - strandat 263.567 kb on + strandat 263.580 kb on - strandat 263.585 kb on - strandat 263.637 kb on - strandat 263.717 kb on + strandat 263.722 kb on - strandat 263.744 kb on - strandat 263.747 kb on + strandat 263.755 kb on - strandat 263.772 kb on + strandat 263.780 kb on - strandat 263.848 kb on - strand, within MPMX20_00246at 263.850 kb on + strand, within MPMX20_00246at 263.897 kb on + strand, within MPMX20_00246at 263.902 kb on + strand, within MPMX20_00246at 263.907 kb on + strand, within MPMX20_00246at 263.960 kb on + strand, within MPMX20_00246at 263.960 kb on + strand, within MPMX20_00246at 263.968 kb on - strand, within MPMX20_00246at 263.968 kb on - strand, within MPMX20_00246at 264.026 kb on - strand, within MPMX20_00246at 264.084 kb on + strand, within MPMX20_00246at 264.099 kb on - strand, within MPMX20_00246at 264.172 kb on - strandat 264.174 kb on + strandat 264.187 kb on - strandat 264.207 kb on - strandat 264.208 kb on - strandat 264.235 kb on + strandat 264.243 kb on - strandat 264.243 kb on - strandat 264.327 kb on + strand, within MPMX20_00247at 264.327 kb on + strand, within MPMX20_00247at 264.340 kb on - strand, within MPMX20_00247at 264.375 kb on - strand, within MPMX20_00247at 264.378 kb on - strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.403 kb on - strand, within MPMX20_00247at 264.451 kb on + strand, within MPMX20_00247at 264.507 kb on - strand, within MPMX20_00247at 264.536 kb on + strand, within MPMX20_00247at 264.536 kb on + strand, within MPMX20_00247at 264.546 kb on + strand, within MPMX20_00247at 264.546 kb on + strand, within MPMX20_00247at 264.554 kb on - strand, within MPMX20_00247at 264.568 kb on - strand, within MPMX20_00247at 264.682 kb on + strandat 264.682 kb on + strandat 264.703 kb on + strandat 264.728 kb on + strandat 264.825 kb on + strandat 264.853 kb on + strandat 264.865 kb on - strandat 264.882 kb on - strandat 264.891 kb on + strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.901 kb on + strand, within MPMX20_00248at 264.908 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.926 kb on - strand, within MPMX20_00248at 264.929 kb on + strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.979 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.017 kb on + strand, within MPMX20_00248at 265.025 kb on - strand, within MPMX20_00248at 265.030 kb on + strand, within MPMX20_00248at 265.040 kb on - strand, within MPMX20_00248at 265.087 kb on + strand, within MPMX20_00248at 265.099 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.164 kb on - strand, within MPMX20_00248at 265.177 kb on + strand, within MPMX20_00248at 265.185 kb on - strand, within MPMX20_00248at 265.185 kb on - strand, within MPMX20_00248at 265.203 kb on + strand, within MPMX20_00248at 265.217 kb on + strandat 265.217 kb on + strandat 265.217 kb on + strandat 265.225 kb on - strandat 265.225 kb on - strandat 265.242 kb on + strandat 265.268 kb on + strandat 265.280 kb on + strandat 265.288 kb on - strandat 265.288 kb on - strandat 265.301 kb on + strandat 265.315 kb on + strandat 265.404 kb on - strandat 265.421 kb on + strandat 265.482 kb on + strand, within MPMX20_00249at 265.494 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.520 kb on - strand, within MPMX20_00249at 265.542 kb on - strand, within MPMX20_00249at 265.663 kb on - strand, within MPMX20_00249

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027
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263,212 + MPMX20_00245 0.77 -0.3
263,272 + MPMX20_00245 0.80 +2.3
263,280 - MPMX20_00245 0.80 -1.6
263,354 + MPMX20_00245 0.84 -0.2
263,356 + MPMX20_00245 0.84 +0.1
263,395 - MPMX20_00245 0.85 -2.8
263,420 + MPMX20_00245 0.87 -3.2
263,428 - MPMX20_00245 0.87 -0.3
263,443 + MPMX20_00245 0.88 +0.5
263,521 - -1.2
263,538 + -1.7
263,559 - +0.1
263,567 + +1.1
263,580 - +2.0
263,585 - -0.7
263,637 - +0.6
263,717 + +0.1
263,722 - -0.1
263,744 - -2.5
263,747 + -0.6
263,755 - -0.4
263,772 + -0.3
263,780 - -0.6
263,848 - MPMX20_00246 0.24 -0.8
263,850 + MPMX20_00246 0.25 -0.6
263,897 + MPMX20_00246 0.35 +0.6
263,902 + MPMX20_00246 0.36 -0.7
263,907 + MPMX20_00246 0.37 -0.4
263,960 + MPMX20_00246 0.49 -0.7
263,960 + MPMX20_00246 0.49 -0.9
263,968 - MPMX20_00246 0.50 +1.0
263,968 - MPMX20_00246 0.50 -1.7
264,026 - MPMX20_00246 0.63 +0.9
264,084 + MPMX20_00246 0.76 +0.3
264,099 - MPMX20_00246 0.79 -1.7
264,172 - -0.4
264,174 + +3.0
264,187 - -0.5
264,207 - -0.9
264,208 - +0.9
264,235 + +1.2
264,243 - -3.7
264,243 - +0.2
264,327 + MPMX20_00247 0.24 +0.4
264,327 + MPMX20_00247 0.24 -1.4
264,340 - MPMX20_00247 0.27 +1.8
264,375 - MPMX20_00247 0.34 -0.2
264,378 - MPMX20_00247 0.34 -0.7
264,395 + MPMX20_00247 0.38 +0.2
264,395 + MPMX20_00247 0.38 -1.4
264,395 + MPMX20_00247 0.38 -2.0
264,403 - MPMX20_00247 0.39 +1.3
264,451 + MPMX20_00247 0.49 -2.8
264,507 - MPMX20_00247 0.59 +3.1
264,536 + MPMX20_00247 0.65 +1.0
264,536 + MPMX20_00247 0.65 +0.8
264,546 + MPMX20_00247 0.67 +1.0
264,546 + MPMX20_00247 0.67 +3.0
264,554 - MPMX20_00247 0.69 -0.4
264,568 - MPMX20_00247 0.71 -0.4
264,682 + +1.0
264,682 + -0.2
264,703 + -0.1
264,728 + +4.1
264,825 + -1.4
264,853 + +1.0
264,865 - -0.1
264,882 - +2.2
264,891 + MPMX20_00248 0.11 -2.8
264,899 - MPMX20_00248 0.13 -0.2
264,899 - MPMX20_00248 0.13 +1.0
264,899 - MPMX20_00248 0.13 -1.5
264,899 - MPMX20_00248 0.13 +0.0
264,901 + MPMX20_00248 0.13 -1.1
264,908 + MPMX20_00248 0.15 +0.2
264,923 + MPMX20_00248 0.18 -0.9
264,923 + MPMX20_00248 0.18 -1.1
264,923 + MPMX20_00248 0.18 +0.2
264,926 - MPMX20_00248 0.19 -2.2
264,929 + MPMX20_00248 0.20 -0.6
264,931 - MPMX20_00248 0.20 +1.7
264,931 - MPMX20_00248 0.20 -1.2
264,931 - MPMX20_00248 0.20 -0.6
264,979 + MPMX20_00248 0.32 +0.0
265,007 + MPMX20_00248 0.39 -0.4
265,007 + MPMX20_00248 0.39 +0.1
265,007 + MPMX20_00248 0.39 +0.9
265,017 + MPMX20_00248 0.41 -0.2
265,025 - MPMX20_00248 0.43 -3.5
265,030 + MPMX20_00248 0.45 -3.2
265,040 - MPMX20_00248 0.47 -2.6
265,087 + MPMX20_00248 0.58 +1.7
265,099 + MPMX20_00248 0.61 -0.1
265,156 + MPMX20_00248 0.75 -0.5
265,156 + MPMX20_00248 0.75 -3.6
265,156 + MPMX20_00248 0.75 +1.0
265,164 - MPMX20_00248 0.77 +0.2
265,177 + MPMX20_00248 0.80 +2.7
265,185 - MPMX20_00248 0.82 -0.0
265,185 - MPMX20_00248 0.82 -0.5
265,203 + MPMX20_00248 0.87 +0.4
265,217 + +0.2
265,217 + -0.1
265,217 + -0.4
265,225 - -2.6
265,225 - -1.2
265,242 + +0.0
265,268 + +0.3
265,280 + -0.5
265,288 - +1.5
265,288 - +1.3
265,301 + -0.2
265,315 + -0.8
265,404 - -1.2
265,421 + +0.2
265,482 + MPMX20_00249 0.14 -3.1
265,494 + MPMX20_00249 0.16 +0.2
265,512 + MPMX20_00249 0.18 +0.4
265,512 + MPMX20_00249 0.18 +2.2
265,512 + MPMX20_00249 0.18 +0.7
265,520 - MPMX20_00249 0.19 -2.7
265,542 - MPMX20_00249 0.21 +1.4
265,663 - MPMX20_00249 0.35 -2.4

Or see this region's nucleotide sequence