Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02572

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02571 and MPMX20_02572 are separated by 282 nucleotidesMPMX20_02572 and MPMX20_02573 are separated by 25 nucleotidesMPMX20_02573 and MPMX20_02574 are separated by 52 nucleotides MPMX20_02571: MPMX20_02571 - Outer membrane protein W, at 2,709,238 to 2,709,870 _02571 MPMX20_02572: MPMX20_02572 - hypothetical protein, at 2,710,153 to 2,710,557 _02572 MPMX20_02573: MPMX20_02573 - hypothetical protein, at 2,710,583 to 2,711,326 _02573 MPMX20_02574: MPMX20_02574 - putative intracellular septation protein A, at 2,711,379 to 2,711,918 _02574 Position (kb) 2710 2711Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6 7 8at 2709.153 kb on + strandat 2709.156 kb on - strandat 2709.165 kb on + strandat 2709.189 kb on - strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.205 kb on - strandat 2709.205 kb on - strandat 2709.207 kb on + strandat 2709.208 kb on + strandat 2709.213 kb on + strandat 2709.213 kb on + strandat 2709.215 kb on - strandat 2709.216 kb on - strandat 2709.216 kb on - strandat 2709.221 kb on - strandat 2709.221 kb on - strandat 2709.222 kb on + strandat 2709.223 kb on + strandat 2709.230 kb on - strandat 2709.230 kb on - strandat 2709.231 kb on - strandat 2709.385 kb on - strand, within MPMX20_02571at 2709.418 kb on + strand, within MPMX20_02571at 2709.424 kb on - strand, within MPMX20_02571at 2709.434 kb on - strand, within MPMX20_02571at 2709.497 kb on - strand, within MPMX20_02571at 2709.499 kb on + strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.536 kb on - strand, within MPMX20_02571at 2709.556 kb on - strand, within MPMX20_02571at 2709.556 kb on - strand, within MPMX20_02571at 2709.609 kb on + strand, within MPMX20_02571at 2709.610 kb on + strand, within MPMX20_02571at 2709.617 kb on - strand, within MPMX20_02571at 2709.617 kb on - strand, within MPMX20_02571at 2709.644 kb on + strand, within MPMX20_02571at 2709.644 kb on + strand, within MPMX20_02571at 2709.667 kb on - strand, within MPMX20_02571at 2709.688 kb on + strand, within MPMX20_02571at 2709.696 kb on - strand, within MPMX20_02571at 2709.696 kb on - strand, within MPMX20_02571at 2709.702 kb on + strand, within MPMX20_02571at 2709.702 kb on + strand, within MPMX20_02571at 2709.710 kb on - strand, within MPMX20_02571at 2709.710 kb on - strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.741 kb on - strand, within MPMX20_02571at 2709.758 kb on + strand, within MPMX20_02571at 2709.764 kb on - strand, within MPMX20_02571at 2709.843 kb on - strandat 2709.843 kb on - strandat 2709.891 kb on - strandat 2709.911 kb on - strandat 2710.011 kb on - strandat 2710.011 kb on - strandat 2710.017 kb on + strandat 2710.025 kb on - strandat 2710.081 kb on - strandat 2710.081 kb on - strandat 2710.081 kb on - strandat 2710.096 kb on + strandat 2710.104 kb on - strandat 2710.155 kb on + strandat 2710.168 kb on - strandat 2710.218 kb on - strand, within MPMX20_02572at 2710.222 kb on + strand, within MPMX20_02572at 2710.230 kb on - strand, within MPMX20_02572at 2710.272 kb on + strand, within MPMX20_02572at 2710.390 kb on - strand, within MPMX20_02572at 2710.427 kb on - strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.432 kb on + strand, within MPMX20_02572at 2710.440 kb on + strand, within MPMX20_02572at 2710.520 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.533 kb on - strandat 2710.533 kb on - strandat 2710.535 kb on + strandat 2710.535 kb on - strandat 2710.543 kb on - strandat 2710.577 kb on - strandat 2710.579 kb on + strandat 2710.579 kb on + strandat 2710.599 kb on + strandat 2710.639 kb on + strandat 2710.639 kb on + strandat 2710.666 kb on + strand, within MPMX20_02573at 2710.678 kb on + strand, within MPMX20_02573at 2710.678 kb on + strand, within MPMX20_02573at 2710.686 kb on - strand, within MPMX20_02573at 2710.688 kb on + strand, within MPMX20_02573at 2710.739 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.804 kb on + strand, within MPMX20_02573at 2710.832 kb on + strand, within MPMX20_02573at 2710.977 kb on - strand, within MPMX20_02573at 2711.013 kb on - strand, within MPMX20_02573at 2711.018 kb on - strand, within MPMX20_02573at 2711.018 kb on - strand, within MPMX20_02573at 2711.058 kb on + strand, within MPMX20_02573at 2711.068 kb on + strand, within MPMX20_02573at 2711.068 kb on + strand, within MPMX20_02573at 2711.076 kb on - strand, within MPMX20_02573at 2711.091 kb on - strand, within MPMX20_02573at 2711.118 kb on - strand, within MPMX20_02573at 2711.139 kb on + strand, within MPMX20_02573at 2711.159 kb on + strand, within MPMX20_02573at 2711.226 kb on + strand, within MPMX20_02573at 2711.282 kb on + strandat 2711.287 kb on + strandat 2711.342 kb on + strandat 2711.342 kb on + strandat 2711.352 kb on + strandat 2711.352 kb on + strandat 2711.352 kb on + strandat 2711.355 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.539 kb on + strand, within MPMX20_02574at 2711.539 kb on + strand, within MPMX20_02574at 2711.539 kb on + strand, within MPMX20_02574

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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2,709,153 + -0.7
2,709,156 - -3.8
2,709,165 + +0.8
2,709,189 - -1.3
2,709,197 + +2.3
2,709,197 + +4.0
2,709,197 + -0.6
2,709,197 + -2.3
2,709,197 + +0.3
2,709,197 + -0.7
2,709,197 + +1.3
2,709,205 - +0.1
2,709,205 - +0.9
2,709,207 + -1.4
2,709,208 + -1.5
2,709,213 + +1.3
2,709,213 + +1.3
2,709,215 - -1.5
2,709,216 - -0.0
2,709,216 - -2.7
2,709,221 - -1.9
2,709,221 - -0.7
2,709,222 + -0.1
2,709,223 + -1.3
2,709,230 - -0.9
2,709,230 - -1.9
2,709,231 - -3.0
2,709,385 - MPMX20_02571 0.23 +0.1
2,709,418 + MPMX20_02571 0.28 +2.1
2,709,424 - MPMX20_02571 0.29 +1.3
2,709,434 - MPMX20_02571 0.31 -1.6
2,709,497 - MPMX20_02571 0.41 -0.6
2,709,499 + MPMX20_02571 0.41 +0.3
2,709,507 - MPMX20_02571 0.42 -1.6
2,709,507 - MPMX20_02571 0.42 -0.6
2,709,507 - MPMX20_02571 0.42 +2.6
2,709,535 - MPMX20_02571 0.47 +0.1
2,709,535 - MPMX20_02571 0.47 -1.3
2,709,535 - MPMX20_02571 0.47 -0.2
2,709,536 - MPMX20_02571 0.47 -1.5
2,709,556 - MPMX20_02571 0.50 -0.4
2,709,556 - MPMX20_02571 0.50 +0.9
2,709,609 + MPMX20_02571 0.59 -0.1
2,709,610 + MPMX20_02571 0.59 -1.8
2,709,617 - MPMX20_02571 0.60 -1.9
2,709,617 - MPMX20_02571 0.60 +0.8
2,709,644 + MPMX20_02571 0.64 -2.6
2,709,644 + MPMX20_02571 0.64 -0.7
2,709,667 - MPMX20_02571 0.68 -0.9
2,709,688 + MPMX20_02571 0.71 -2.5
2,709,696 - MPMX20_02571 0.72 -0.2
2,709,696 - MPMX20_02571 0.72 -0.8
2,709,702 + MPMX20_02571 0.73 -0.8
2,709,702 + MPMX20_02571 0.73 -1.1
2,709,710 - MPMX20_02571 0.75 -1.5
2,709,710 - MPMX20_02571 0.75 -0.9
2,709,717 + MPMX20_02571 0.76 -0.3
2,709,717 + MPMX20_02571 0.76 -0.2
2,709,717 + MPMX20_02571 0.76 +1.1
2,709,741 - MPMX20_02571 0.79 +0.9
2,709,758 + MPMX20_02571 0.82 +0.3
2,709,764 - MPMX20_02571 0.83 +2.9
2,709,843 - -1.4
2,709,843 - -1.8
2,709,891 - +0.6
2,709,911 - -1.3
2,710,011 - -1.1
2,710,011 - +0.2
2,710,017 + +0.6
2,710,025 - -0.9
2,710,081 - -2.3
2,710,081 - -0.6
2,710,081 - -0.3
2,710,096 + -1.2
2,710,104 - -0.4
2,710,155 + +1.9
2,710,168 - -1.9
2,710,218 - MPMX20_02572 0.16 +0.2
2,710,222 + MPMX20_02572 0.17 -0.6
2,710,230 - MPMX20_02572 0.19 +0.8
2,710,272 + MPMX20_02572 0.29 -1.7
2,710,390 - MPMX20_02572 0.59 +0.4
2,710,427 - MPMX20_02572 0.68 +0.5
2,710,428 + MPMX20_02572 0.68 -1.7
2,710,428 + MPMX20_02572 0.68 +1.5
2,710,432 + MPMX20_02572 0.69 +1.4
2,710,440 + MPMX20_02572 0.71 +1.2
2,710,520 + -0.6
2,710,525 + -0.7
2,710,525 + -0.9
2,710,525 + +0.5
2,710,525 + +0.1
2,710,525 + -0.1
2,710,525 + -0.9
2,710,533 - +0.6
2,710,533 - -0.9
2,710,535 + -1.6
2,710,535 - +0.1
2,710,543 - +0.5
2,710,577 - +1.0
2,710,579 + +2.9
2,710,579 + +1.9
2,710,599 + -0.3
2,710,639 + +8.0
2,710,639 + -0.0
2,710,666 + MPMX20_02573 0.11 +0.5
2,710,678 + MPMX20_02573 0.13 -2.8
2,710,678 + MPMX20_02573 0.13 -0.2
2,710,686 - MPMX20_02573 0.14 -0.7
2,710,688 + MPMX20_02573 0.14 +1.4
2,710,739 - MPMX20_02573 0.21 -1.4
2,710,769 - MPMX20_02573 0.25 -1.1
2,710,769 - MPMX20_02573 0.25 -2.2
2,710,804 + MPMX20_02573 0.30 -1.4
2,710,832 + MPMX20_02573 0.33 -0.6
2,710,977 - MPMX20_02573 0.53 +0.9
2,711,013 - MPMX20_02573 0.58 -1.0
2,711,018 - MPMX20_02573 0.58 -1.2
2,711,018 - MPMX20_02573 0.58 +0.1
2,711,058 + MPMX20_02573 0.64 -1.9
2,711,068 + MPMX20_02573 0.65 -0.6
2,711,068 + MPMX20_02573 0.65 -0.5
2,711,076 - MPMX20_02573 0.66 -0.6
2,711,091 - MPMX20_02573 0.68 -0.1
2,711,118 - MPMX20_02573 0.72 -4.1
2,711,139 + MPMX20_02573 0.75 -1.8
2,711,159 + MPMX20_02573 0.77 +3.4
2,711,226 + MPMX20_02573 0.86 -2.0
2,711,282 + -1.0
2,711,287 + -0.7
2,711,342 + -0.4
2,711,342 + +2.1
2,711,352 + -2.0
2,711,352 + -0.1
2,711,352 + -2.1
2,711,355 - -0.6
2,711,360 - +0.1
2,711,360 - +0.7
2,711,360 - -1.1
2,711,360 - -0.5
2,711,360 - +0.1
2,711,360 - -0.9
2,711,360 - -0.8
2,711,360 - -2.0
2,711,360 - -1.5
2,711,539 + MPMX20_02574 0.30 +1.9
2,711,539 + MPMX20_02574 0.30 -0.5
2,711,539 + MPMX20_02574 0.30 +0.3

Or see this region's nucleotide sequence