Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02480

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02478 and MPMX20_02479 are separated by 147 nucleotidesMPMX20_02479 and MPMX20_02480 are separated by 132 nucleotidesMPMX20_02480 and MPMX20_02481 are separated by 72 nucleotidesMPMX20_02481 and MPMX20_02482 are separated by 52 nucleotides MPMX20_02478: MPMX20_02478 - Putrescine export system ATP-binding protein SapF, at 2,618,455 to 2,619,261 _02478 MPMX20_02479: MPMX20_02479 - Transposon Tn10 TetC protein, at 2,619,409 to 2,619,999 _02479 MPMX20_02480: MPMX20_02480 - RutC family protein YjgH, at 2,620,132 to 2,620,527 _02480 MPMX20_02481: MPMX20_02481 - Right origin-binding protein, at 2,620,600 to 2,621,424 _02481 MPMX20_02482: MPMX20_02482 - putative diguanylate cyclase DgcT, at 2,621,477 to 2,622,832 _02482 Position (kb) 2620 2621Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6 7 8at 2619.132 kb on + strand, within MPMX20_02478at 2619.150 kb on + strand, within MPMX20_02478at 2619.327 kb on + strandat 2619.351 kb on + strandat 2619.371 kb on + strandat 2619.371 kb on + strandat 2619.371 kb on + strandat 2619.379 kb on - strandat 2619.401 kb on - strandat 2619.425 kb on - strandat 2619.485 kb on - strand, within MPMX20_02479at 2619.491 kb on + strand, within MPMX20_02479at 2619.491 kb on + strand, within MPMX20_02479at 2619.499 kb on - strand, within MPMX20_02479at 2619.499 kb on - strand, within MPMX20_02479at 2619.501 kb on + strand, within MPMX20_02479at 2619.514 kb on - strand, within MPMX20_02479at 2619.567 kb on - strand, within MPMX20_02479at 2619.600 kb on - strand, within MPMX20_02479at 2619.614 kb on - strand, within MPMX20_02479at 2619.632 kb on - strand, within MPMX20_02479at 2619.646 kb on + strand, within MPMX20_02479at 2619.646 kb on + strand, within MPMX20_02479at 2619.646 kb on + strand, within MPMX20_02479at 2619.646 kb on + strand, within MPMX20_02479at 2619.654 kb on - strand, within MPMX20_02479at 2619.654 kb on - strand, within MPMX20_02479at 2619.655 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.672 kb on + strand, within MPMX20_02479at 2619.680 kb on - strand, within MPMX20_02479at 2619.680 kb on - strand, within MPMX20_02479at 2619.680 kb on - strand, within MPMX20_02479at 2619.712 kb on - strand, within MPMX20_02479at 2619.842 kb on + strand, within MPMX20_02479at 2619.850 kb on + strand, within MPMX20_02479at 2619.866 kb on - strand, within MPMX20_02479at 2619.871 kb on + strand, within MPMX20_02479at 2619.903 kb on + strand, within MPMX20_02479at 2619.915 kb on - strand, within MPMX20_02479at 2619.929 kb on + strand, within MPMX20_02479at 2619.974 kb on + strandat 2619.993 kb on - strandat 2619.995 kb on + strandat 2619.997 kb on + strandat 2620.096 kb on + strandat 2620.104 kb on + strandat 2620.134 kb on + strandat 2620.139 kb on + strandat 2620.140 kb on + strandat 2620.145 kb on + strandat 2620.147 kb on + strandat 2620.147 kb on + strandat 2620.147 kb on + strandat 2620.166 kb on + strandat 2620.174 kb on - strand, within MPMX20_02480at 2620.183 kb on + strand, within MPMX20_02480at 2620.193 kb on + strand, within MPMX20_02480at 2620.198 kb on + strand, within MPMX20_02480at 2620.201 kb on - strand, within MPMX20_02480at 2620.234 kb on + strand, within MPMX20_02480at 2620.239 kb on + strand, within MPMX20_02480at 2620.239 kb on + strand, within MPMX20_02480at 2620.239 kb on + strand, within MPMX20_02480at 2620.239 kb on + strand, within MPMX20_02480at 2620.242 kb on - strand, within MPMX20_02480at 2620.242 kb on - strand, within MPMX20_02480at 2620.248 kb on - strand, within MPMX20_02480at 2620.248 kb on - strand, within MPMX20_02480at 2620.273 kb on + strand, within MPMX20_02480at 2620.273 kb on + strand, within MPMX20_02480at 2620.287 kb on + strand, within MPMX20_02480at 2620.287 kb on + strand, within MPMX20_02480at 2620.295 kb on - strand, within MPMX20_02480at 2620.308 kb on + strand, within MPMX20_02480at 2620.308 kb on + strand, within MPMX20_02480at 2620.308 kb on + strand, within MPMX20_02480at 2620.316 kb on - strand, within MPMX20_02480at 2620.328 kb on - strand, within MPMX20_02480at 2620.332 kb on + strand, within MPMX20_02480at 2620.335 kb on + strand, within MPMX20_02480at 2620.348 kb on + strand, within MPMX20_02480at 2620.368 kb on + strand, within MPMX20_02480at 2620.368 kb on + strand, within MPMX20_02480at 2620.369 kb on + strand, within MPMX20_02480at 2620.430 kb on + strand, within MPMX20_02480at 2620.436 kb on + strand, within MPMX20_02480at 2620.436 kb on + strand, within MPMX20_02480at 2620.437 kb on + strand, within MPMX20_02480at 2620.441 kb on + strand, within MPMX20_02480at 2620.441 kb on + strand, within MPMX20_02480at 2620.441 kb on + strand, within MPMX20_02480at 2620.441 kb on + strand, within MPMX20_02480at 2620.441 kb on + strand, within MPMX20_02480at 2620.446 kb on + strand, within MPMX20_02480at 2620.449 kb on + strand, within MPMX20_02480at 2620.449 kb on + strand, within MPMX20_02480at 2620.449 kb on + strand, within MPMX20_02480at 2620.451 kb on + strand, within MPMX20_02480at 2620.451 kb on + strand, within MPMX20_02480at 2620.456 kb on + strand, within MPMX20_02480at 2620.462 kb on + strand, within MPMX20_02480at 2620.462 kb on + strand, within MPMX20_02480at 2620.463 kb on + strand, within MPMX20_02480at 2620.467 kb on + strand, within MPMX20_02480at 2620.467 kb on + strand, within MPMX20_02480at 2620.472 kb on + strand, within MPMX20_02480at 2620.472 kb on + strand, within MPMX20_02480at 2620.507 kb on + strandat 2620.533 kb on + strandat 2620.533 kb on + strandat 2620.579 kb on + strandat 2620.698 kb on - strand, within MPMX20_02481at 2620.748 kb on - strand, within MPMX20_02481at 2620.771 kb on - strand, within MPMX20_02481at 2621.037 kb on - strand, within MPMX20_02481at 2621.131 kb on - strand, within MPMX20_02481at 2621.131 kb on - strand, within MPMX20_02481at 2621.136 kb on - strand, within MPMX20_02481at 2621.136 kb on - strand, within MPMX20_02481at 2621.271 kb on - strand, within MPMX20_02481at 2621.281 kb on - strand, within MPMX20_02481at 2621.281 kb on - strand, within MPMX20_02481at 2621.281 kb on - strand, within MPMX20_02481at 2621.281 kb on - strand, within MPMX20_02481at 2621.318 kb on - strand, within MPMX20_02481at 2621.318 kb on - strand, within MPMX20_02481at 2621.318 kb on - strand, within MPMX20_02481at 2621.318 kb on - strand, within MPMX20_02481at 2621.323 kb on - strand, within MPMX20_02481at 2621.331 kb on - strand, within MPMX20_02481at 2621.339 kb on - strand, within MPMX20_02481at 2621.341 kb on - strand, within MPMX20_02481at 2621.341 kb on - strand, within MPMX20_02481at 2621.341 kb on - strand, within MPMX20_02481at 2621.341 kb on - strand, within MPMX20_02481at 2621.351 kb on - strandat 2621.364 kb on - strandat 2621.426 kb on - strandat 2621.427 kb on - strandat 2621.427 kb on - strandat 2621.427 kb on - strandat 2621.449 kb on - strandat 2621.462 kb on - strandat 2621.472 kb on - strandat 2621.472 kb on - strandat 2621.472 kb on - strandat 2621.472 kb on - strandat 2621.480 kb on + strandat 2621.480 kb on + strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.483 kb on - strandat 2621.488 kb on - strandat 2621.488 kb on - strandat 2621.493 kb on - strandat 2621.494 kb on - strandat 2621.494 kb on - strandat 2621.506 kb on - strandat 2621.513 kb on + strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.516 kb on - strandat 2621.521 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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2,619,132 + MPMX20_02478 0.84 -0.7
2,619,150 + MPMX20_02478 0.86 -0.4
2,619,327 + -1.9
2,619,351 + -0.8
2,619,371 + +1.1
2,619,371 + +1.6
2,619,371 + -1.6
2,619,379 - -1.0
2,619,401 - +3.6
2,619,425 - +0.7
2,619,485 - MPMX20_02479 0.13 +0.1
2,619,491 + MPMX20_02479 0.14 -1.2
2,619,491 + MPMX20_02479 0.14 -2.4
2,619,499 - MPMX20_02479 0.15 -1.6
2,619,499 - MPMX20_02479 0.15 +0.8
2,619,501 + MPMX20_02479 0.16 -0.9
2,619,514 - MPMX20_02479 0.18 +2.4
2,619,567 - MPMX20_02479 0.27 +0.2
2,619,600 - MPMX20_02479 0.32 -0.4
2,619,614 - MPMX20_02479 0.35 -0.6
2,619,632 - MPMX20_02479 0.38 +0.6
2,619,646 + MPMX20_02479 0.40 -1.6
2,619,646 + MPMX20_02479 0.40 -1.0
2,619,646 + MPMX20_02479 0.40 +0.1
2,619,646 + MPMX20_02479 0.40 -1.0
2,619,654 - MPMX20_02479 0.41 -1.0
2,619,654 - MPMX20_02479 0.41 +0.1
2,619,655 + MPMX20_02479 0.42 +0.6
2,619,672 + MPMX20_02479 0.45 -3.0
2,619,672 + MPMX20_02479 0.45 +1.0
2,619,672 + MPMX20_02479 0.45 -2.3
2,619,672 + MPMX20_02479 0.45 -2.4
2,619,672 + MPMX20_02479 0.45 -2.5
2,619,672 + MPMX20_02479 0.45 -0.6
2,619,672 + MPMX20_02479 0.45 -1.2
2,619,680 - MPMX20_02479 0.46 -4.0
2,619,680 - MPMX20_02479 0.46 -0.0
2,619,680 - MPMX20_02479 0.46 -1.1
2,619,712 - MPMX20_02479 0.51 +2.7
2,619,842 + MPMX20_02479 0.73 -0.6
2,619,850 + MPMX20_02479 0.75 -0.5
2,619,866 - MPMX20_02479 0.77 +0.2
2,619,871 + MPMX20_02479 0.78 -1.4
2,619,903 + MPMX20_02479 0.84 -1.4
2,619,915 - MPMX20_02479 0.86 -1.4
2,619,929 + MPMX20_02479 0.88 +2.0
2,619,974 + -0.6
2,619,993 - +0.9
2,619,995 + -0.4
2,619,997 + -2.6
2,620,096 + -2.5
2,620,104 + +0.2
2,620,134 + -0.5
2,620,139 + +1.0
2,620,140 + -0.9
2,620,145 + +1.4
2,620,147 + -0.2
2,620,147 + +2.9
2,620,147 + +0.4
2,620,166 + -1.1
2,620,174 - MPMX20_02480 0.11 -2.5
2,620,183 + MPMX20_02480 0.13 +1.0
2,620,193 + MPMX20_02480 0.15 -0.4
2,620,198 + MPMX20_02480 0.17 -2.2
2,620,201 - MPMX20_02480 0.17 -1.1
2,620,234 + MPMX20_02480 0.26 +8.7
2,620,239 + MPMX20_02480 0.27 +0.3
2,620,239 + MPMX20_02480 0.27 -0.4
2,620,239 + MPMX20_02480 0.27 +2.9
2,620,239 + MPMX20_02480 0.27 -1.0
2,620,242 - MPMX20_02480 0.28 -0.3
2,620,242 - MPMX20_02480 0.28 -0.4
2,620,248 - MPMX20_02480 0.29 +0.9
2,620,248 - MPMX20_02480 0.29 +0.8
2,620,273 + MPMX20_02480 0.36 -2.5
2,620,273 + MPMX20_02480 0.36 -0.4
2,620,287 + MPMX20_02480 0.39 +0.4
2,620,287 + MPMX20_02480 0.39 -0.2
2,620,295 - MPMX20_02480 0.41 +0.9
2,620,308 + MPMX20_02480 0.44 +2.2
2,620,308 + MPMX20_02480 0.44 -0.0
2,620,308 + MPMX20_02480 0.44 -2.1
2,620,316 - MPMX20_02480 0.46 -2.0
2,620,328 - MPMX20_02480 0.49 +2.9
2,620,332 + MPMX20_02480 0.51 -1.6
2,620,335 + MPMX20_02480 0.51 +1.4
2,620,348 + MPMX20_02480 0.55 -3.9
2,620,368 + MPMX20_02480 0.60 -0.4
2,620,368 + MPMX20_02480 0.60 +1.9
2,620,369 + MPMX20_02480 0.60 -0.8
2,620,430 + MPMX20_02480 0.75 +0.2
2,620,436 + MPMX20_02480 0.77 +1.3
2,620,436 + MPMX20_02480 0.77 +1.0
2,620,437 + MPMX20_02480 0.77 +0.6
2,620,441 + MPMX20_02480 0.78 -1.2
2,620,441 + MPMX20_02480 0.78 -3.1
2,620,441 + MPMX20_02480 0.78 +1.6
2,620,441 + MPMX20_02480 0.78 +0.0
2,620,441 + MPMX20_02480 0.78 -2.5
2,620,446 + MPMX20_02480 0.79 +2.1
2,620,449 + MPMX20_02480 0.80 +1.3
2,620,449 + MPMX20_02480 0.80 -1.5
2,620,449 + MPMX20_02480 0.80 +2.2
2,620,451 + MPMX20_02480 0.81 -1.0
2,620,451 + MPMX20_02480 0.81 -2.4
2,620,456 + MPMX20_02480 0.82 -0.1
2,620,462 + MPMX20_02480 0.83 +1.7
2,620,462 + MPMX20_02480 0.83 -0.1
2,620,463 + MPMX20_02480 0.84 -1.2
2,620,467 + MPMX20_02480 0.85 -1.6
2,620,467 + MPMX20_02480 0.85 +2.7
2,620,472 + MPMX20_02480 0.86 +1.3
2,620,472 + MPMX20_02480 0.86 -0.1
2,620,507 + +3.9
2,620,533 + +1.9
2,620,533 + +0.6
2,620,579 + -1.1
2,620,698 - MPMX20_02481 0.12 +0.3
2,620,748 - MPMX20_02481 0.18 +2.9
2,620,771 - MPMX20_02481 0.21 -1.8
2,621,037 - MPMX20_02481 0.53 +1.9
2,621,131 - MPMX20_02481 0.64 +0.6
2,621,131 - MPMX20_02481 0.64 +1.9
2,621,136 - MPMX20_02481 0.65 +0.9
2,621,136 - MPMX20_02481 0.65 +0.1
2,621,271 - MPMX20_02481 0.81 +0.3
2,621,281 - MPMX20_02481 0.83 +2.1
2,621,281 - MPMX20_02481 0.83 +0.7
2,621,281 - MPMX20_02481 0.83 -1.7
2,621,281 - MPMX20_02481 0.83 +0.3
2,621,318 - MPMX20_02481 0.87 +0.1
2,621,318 - MPMX20_02481 0.87 -0.8
2,621,318 - MPMX20_02481 0.87 +0.9
2,621,318 - MPMX20_02481 0.87 +1.9
2,621,323 - MPMX20_02481 0.88 +0.6
2,621,331 - MPMX20_02481 0.89 +0.5
2,621,339 - MPMX20_02481 0.90 -1.6
2,621,341 - MPMX20_02481 0.90 -0.1
2,621,341 - MPMX20_02481 0.90 +0.5
2,621,341 - MPMX20_02481 0.90 -0.1
2,621,341 - MPMX20_02481 0.90 -1.2
2,621,351 - -2.1
2,621,364 - +0.9
2,621,426 - +0.3
2,621,427 - +1.3
2,621,427 - -2.7
2,621,427 - -1.6
2,621,449 - +2.2
2,621,462 - -1.7
2,621,472 - +1.9
2,621,472 - -0.6
2,621,472 - +0.4
2,621,472 - -0.4
2,621,480 + -2.4
2,621,480 + +1.3
2,621,483 - -1.4
2,621,483 - -0.7
2,621,483 - -2.2
2,621,483 - -0.8
2,621,483 - +0.5
2,621,483 - -2.5
2,621,483 - +1.9
2,621,483 - -1.2
2,621,488 - -1.4
2,621,488 - -0.2
2,621,493 - +1.6
2,621,494 - -1.7
2,621,494 - -0.6
2,621,506 - +1.1
2,621,513 + +1.0
2,621,516 - -0.2
2,621,516 - +0.6
2,621,516 - -0.0
2,621,516 - -2.7
2,621,516 - +1.0
2,621,516 - +1.3
2,621,516 - +0.6
2,621,516 - +0.9
2,621,516 - +0.2
2,621,521 - -0.4

Or see this region's nucleotide sequence