Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02274

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02273 and MPMX20_02274 are separated by 109 nucleotidesMPMX20_02274 and MPMX20_02275 are separated by 82 nucleotidesMPMX20_02275 and MPMX20_02276 are separated by 117 nucleotides MPMX20_02273: MPMX20_02273 - hypothetical protein, at 2,383,905 to 2,385,350 _02273 MPMX20_02274: MPMX20_02274 - hypothetical protein, at 2,385,460 to 2,386,425 _02274 MPMX20_02275: MPMX20_02275 - Acetyltransferase, at 2,386,508 to 2,387,035 _02275 MPMX20_02276: MPMX20_02276 - Altronate oxidoreductase, at 2,387,153 to 2,388,604 _02276 Position (kb) 2385 2386 2387Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2384.463 kb on - strand, within MPMX20_02273at 2384.466 kb on + strand, within MPMX20_02273at 2384.475 kb on - strand, within MPMX20_02273at 2384.480 kb on + strand, within MPMX20_02273at 2384.520 kb on + strand, within MPMX20_02273at 2384.548 kb on + strand, within MPMX20_02273at 2384.572 kb on + strand, within MPMX20_02273at 2384.639 kb on - strand, within MPMX20_02273at 2384.753 kb on - strand, within MPMX20_02273at 2385.020 kb on - strand, within MPMX20_02273at 2385.057 kb on + strand, within MPMX20_02273at 2385.073 kb on - strand, within MPMX20_02273at 2385.085 kb on + strand, within MPMX20_02273at 2385.085 kb on + strand, within MPMX20_02273at 2385.093 kb on - strand, within MPMX20_02273at 2385.174 kb on + strand, within MPMX20_02273at 2385.174 kb on + strand, within MPMX20_02273at 2385.174 kb on + strand, within MPMX20_02273at 2385.174 kb on + strand, within MPMX20_02273at 2385.174 kb on + strand, within MPMX20_02273at 2385.177 kb on - strand, within MPMX20_02273at 2385.182 kb on - strand, within MPMX20_02273at 2385.182 kb on - strand, within MPMX20_02273at 2385.235 kb on - strandat 2385.289 kb on + strandat 2385.297 kb on - strandat 2385.311 kb on + strandat 2385.394 kb on - strandat 2385.396 kb on + strandat 2385.412 kb on + strandat 2385.515 kb on + strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.533 kb on - strandat 2385.662 kb on + strand, within MPMX20_02274at 2385.703 kb on - strand, within MPMX20_02274at 2385.914 kb on - strand, within MPMX20_02274at 2386.007 kb on + strand, within MPMX20_02274at 2386.015 kb on - strand, within MPMX20_02274at 2386.015 kb on - strand, within MPMX20_02274at 2386.042 kb on - strand, within MPMX20_02274at 2386.051 kb on - strand, within MPMX20_02274at 2386.056 kb on - strand, within MPMX20_02274at 2386.063 kb on + strand, within MPMX20_02274at 2386.073 kb on + strand, within MPMX20_02274at 2386.111 kb on + strand, within MPMX20_02274at 2386.171 kb on - strand, within MPMX20_02274at 2386.204 kb on - strand, within MPMX20_02274at 2386.233 kb on + strand, within MPMX20_02274at 2386.243 kb on - strand, within MPMX20_02274at 2386.259 kb on - strand, within MPMX20_02274at 2386.306 kb on + strand, within MPMX20_02274at 2386.341 kb on + strandat 2386.362 kb on - strandat 2386.372 kb on - strandat 2386.372 kb on - strandat 2386.430 kb on + strandat 2386.444 kb on - strandat 2386.515 kb on + strandat 2386.517 kb on + strandat 2386.617 kb on + strand, within MPMX20_02275at 2386.625 kb on - strand, within MPMX20_02275at 2386.705 kb on + strand, within MPMX20_02275at 2386.748 kb on - strand, within MPMX20_02275at 2386.838 kb on - strand, within MPMX20_02275at 2386.867 kb on + strand, within MPMX20_02275at 2386.937 kb on - strand, within MPMX20_02275at 2387.158 kb on - strandat 2387.168 kb on - strandat 2387.183 kb on + strandat 2387.191 kb on - strandat 2387.350 kb on - strand, within MPMX20_02276at 2387.351 kb on + strand, within MPMX20_02276at 2387.361 kb on - strand, within MPMX20_02276at 2387.411 kb on + strand, within MPMX20_02276

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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2,384,463 - MPMX20_02273 0.39 +0.7
2,384,466 + MPMX20_02273 0.39 -0.7
2,384,475 - MPMX20_02273 0.39 -0.1
2,384,480 + MPMX20_02273 0.40 -3.4
2,384,520 + MPMX20_02273 0.43 -0.3
2,384,548 + MPMX20_02273 0.44 -0.4
2,384,572 + MPMX20_02273 0.46 -1.9
2,384,639 - MPMX20_02273 0.51 -2.1
2,384,753 - MPMX20_02273 0.59 -0.0
2,385,020 - MPMX20_02273 0.77 +1.4
2,385,057 + MPMX20_02273 0.80 +0.3
2,385,073 - MPMX20_02273 0.81 -0.1
2,385,085 + MPMX20_02273 0.82 -1.9
2,385,085 + MPMX20_02273 0.82 +0.8
2,385,093 - MPMX20_02273 0.82 +1.0
2,385,174 + MPMX20_02273 0.88 -0.8
2,385,174 + MPMX20_02273 0.88 -0.8
2,385,174 + MPMX20_02273 0.88 +0.4
2,385,174 + MPMX20_02273 0.88 +0.6
2,385,174 + MPMX20_02273 0.88 -1.6
2,385,177 - MPMX20_02273 0.88 -0.6
2,385,182 - MPMX20_02273 0.88 -2.8
2,385,182 - MPMX20_02273 0.88 -0.2
2,385,235 - -1.2
2,385,289 + +2.4
2,385,297 - -0.2
2,385,311 + -1.0
2,385,394 - -3.8
2,385,396 + +4.1
2,385,412 + -1.8
2,385,515 + +0.0
2,385,523 - -0.2
2,385,523 - -0.8
2,385,523 - +0.3
2,385,523 - +1.6
2,385,523 - +0.5
2,385,533 - -1.4
2,385,662 + MPMX20_02274 0.21 +0.6
2,385,703 - MPMX20_02274 0.25 +1.9
2,385,914 - MPMX20_02274 0.47 -2.4
2,386,007 + MPMX20_02274 0.57 -0.1
2,386,015 - MPMX20_02274 0.57 +0.6
2,386,015 - MPMX20_02274 0.57 +0.6
2,386,042 - MPMX20_02274 0.60 +2.2
2,386,051 - MPMX20_02274 0.61 +0.9
2,386,056 - MPMX20_02274 0.62 +2.4
2,386,063 + MPMX20_02274 0.62 +5.1
2,386,073 + MPMX20_02274 0.63 -1.4
2,386,111 + MPMX20_02274 0.67 -1.6
2,386,171 - MPMX20_02274 0.74 -0.8
2,386,204 - MPMX20_02274 0.77 -0.7
2,386,233 + MPMX20_02274 0.80 -2.7
2,386,243 - MPMX20_02274 0.81 +0.8
2,386,259 - MPMX20_02274 0.83 +0.6
2,386,306 + MPMX20_02274 0.88 +1.3
2,386,341 + +0.9
2,386,362 - -0.8
2,386,372 - +1.3
2,386,372 - -0.7
2,386,430 + +2.5
2,386,444 - +1.4
2,386,515 + +0.0
2,386,517 + -0.7
2,386,617 + MPMX20_02275 0.21 -1.7
2,386,625 - MPMX20_02275 0.22 +2.4
2,386,705 + MPMX20_02275 0.37 -1.1
2,386,748 - MPMX20_02275 0.45 +2.8
2,386,838 - MPMX20_02275 0.62 +3.9
2,386,867 + MPMX20_02275 0.68 -0.9
2,386,937 - MPMX20_02275 0.81 +0.5
2,387,158 - +2.8
2,387,168 - -0.8
2,387,183 + +0.3
2,387,191 - -1.3
2,387,350 - MPMX20_02276 0.14 +0.6
2,387,351 + MPMX20_02276 0.14 +0.5
2,387,361 - MPMX20_02276 0.14 -0.4
2,387,411 + MPMX20_02276 0.18 -1.3

Or see this region's nucleotide sequence