Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02263

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02262 and MPMX20_02263 are separated by 177 nucleotidesMPMX20_02263 and MPMX20_02264 are separated by 27 nucleotidesMPMX20_02264 and MPMX20_02265 are separated by 51 nucleotides MPMX20_02262: MPMX20_02262 - Sugar efflux transporter, at 2,372,868 to 2,374,064 _02262 MPMX20_02263: MPMX20_02263 - hypothetical protein, at 2,374,242 to 2,375,030 _02263 MPMX20_02264: MPMX20_02264 - hypothetical protein, at 2,375,058 to 2,375,858 _02264 MPMX20_02265: MPMX20_02265 - hypothetical protein, at 2,375,910 to 2,376,872 _02265 Position (kb) 2374 2375 2376Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2373.247 kb on - strand, within MPMX20_02262at 2373.287 kb on - strand, within MPMX20_02262at 2373.365 kb on + strand, within MPMX20_02262at 2373.368 kb on + strand, within MPMX20_02262at 2373.375 kb on + strand, within MPMX20_02262at 2373.383 kb on - strand, within MPMX20_02262at 2373.383 kb on - strand, within MPMX20_02262at 2373.384 kb on + strand, within MPMX20_02262at 2373.384 kb on + strand, within MPMX20_02262at 2373.385 kb on + strand, within MPMX20_02262at 2373.393 kb on - strand, within MPMX20_02262at 2373.606 kb on + strand, within MPMX20_02262at 2373.606 kb on + strand, within MPMX20_02262at 2373.614 kb on - strand, within MPMX20_02262at 2373.614 kb on - strand, within MPMX20_02262at 2373.711 kb on + strand, within MPMX20_02262at 2373.839 kb on + strand, within MPMX20_02262at 2373.857 kb on + strand, within MPMX20_02262at 2373.873 kb on + strand, within MPMX20_02262at 2373.873 kb on + strand, within MPMX20_02262at 2373.895 kb on - strand, within MPMX20_02262at 2373.900 kb on + strand, within MPMX20_02262at 2373.905 kb on + strand, within MPMX20_02262at 2373.905 kb on + strand, within MPMX20_02262at 2373.908 kb on - strand, within MPMX20_02262at 2373.910 kb on + strand, within MPMX20_02262at 2373.913 kb on - strand, within MPMX20_02262at 2373.970 kb on - strandat 2374.043 kb on + strandat 2374.049 kb on - strandat 2374.347 kb on + strand, within MPMX20_02263at 2374.347 kb on - strand, within MPMX20_02263at 2374.357 kb on - strand, within MPMX20_02263at 2374.362 kb on - strand, within MPMX20_02263at 2374.367 kb on + strand, within MPMX20_02263at 2374.424 kb on - strand, within MPMX20_02263at 2374.451 kb on + strand, within MPMX20_02263at 2374.479 kb on + strand, within MPMX20_02263at 2374.487 kb on - strand, within MPMX20_02263at 2374.510 kb on - strand, within MPMX20_02263at 2374.555 kb on - strand, within MPMX20_02263at 2374.679 kb on + strand, within MPMX20_02263at 2374.712 kb on + strand, within MPMX20_02263at 2374.845 kb on - strand, within MPMX20_02263at 2374.850 kb on + strand, within MPMX20_02263at 2374.858 kb on - strand, within MPMX20_02263at 2374.919 kb on - strand, within MPMX20_02263at 2374.925 kb on + strand, within MPMX20_02263at 2374.944 kb on + strand, within MPMX20_02263at 2374.944 kb on + strand, within MPMX20_02263at 2374.950 kb on - strand, within MPMX20_02263at 2374.966 kb on - strandat 2374.991 kb on + strandat 2374.992 kb on + strandat 2374.995 kb on - strandat 2375.046 kb on + strandat 2375.056 kb on - strandat 2375.163 kb on + strand, within MPMX20_02264at 2375.171 kb on - strand, within MPMX20_02264at 2375.173 kb on - strand, within MPMX20_02264at 2375.178 kb on - strand, within MPMX20_02264at 2375.178 kb on - strand, within MPMX20_02264at 2375.214 kb on + strand, within MPMX20_02264at 2375.227 kb on + strand, within MPMX20_02264at 2375.260 kb on + strand, within MPMX20_02264at 2375.268 kb on - strand, within MPMX20_02264at 2375.278 kb on - strand, within MPMX20_02264at 2375.283 kb on + strand, within MPMX20_02264at 2375.397 kb on + strand, within MPMX20_02264at 2375.413 kb on - strand, within MPMX20_02264at 2375.534 kb on + strand, within MPMX20_02264at 2375.535 kb on + strand, within MPMX20_02264at 2375.576 kb on + strand, within MPMX20_02264at 2375.582 kb on + strand, within MPMX20_02264at 2375.584 kb on - strand, within MPMX20_02264at 2375.652 kb on - strand, within MPMX20_02264at 2375.763 kb on + strand, within MPMX20_02264at 2375.825 kb on - strandat 2375.837 kb on - strandat 2375.847 kb on - strandat 2375.910 kb on - strandat 2375.912 kb on + strandat 2375.966 kb on + strandat 2375.966 kb on + strandat 2375.974 kb on - strandat 2375.974 kb on - strandat 2375.974 kb on - strandat 2375.981 kb on + strandat 2375.981 kb on + strandat 2375.989 kb on + strandat 2375.990 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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2,373,247 - MPMX20_02262 0.32 -0.8
2,373,287 - MPMX20_02262 0.35 +0.6
2,373,365 + MPMX20_02262 0.42 +1.8
2,373,368 + MPMX20_02262 0.42 +0.0
2,373,375 + MPMX20_02262 0.42 +0.4
2,373,383 - MPMX20_02262 0.43 +1.8
2,373,383 - MPMX20_02262 0.43 +0.8
2,373,384 + MPMX20_02262 0.43 +1.5
2,373,384 + MPMX20_02262 0.43 -0.6
2,373,385 + MPMX20_02262 0.43 -0.5
2,373,393 - MPMX20_02262 0.44 -0.8
2,373,606 + MPMX20_02262 0.62 +1.0
2,373,606 + MPMX20_02262 0.62 -1.0
2,373,614 - MPMX20_02262 0.62 -0.7
2,373,614 - MPMX20_02262 0.62 -1.2
2,373,711 + MPMX20_02262 0.70 +1.5
2,373,839 + MPMX20_02262 0.81 -0.9
2,373,857 + MPMX20_02262 0.83 +0.6
2,373,873 + MPMX20_02262 0.84 -1.6
2,373,873 + MPMX20_02262 0.84 +1.8
2,373,895 - MPMX20_02262 0.86 -1.4
2,373,900 + MPMX20_02262 0.86 +0.2
2,373,905 + MPMX20_02262 0.87 +0.4
2,373,905 + MPMX20_02262 0.87 -1.0
2,373,908 - MPMX20_02262 0.87 -0.7
2,373,910 + MPMX20_02262 0.87 -2.6
2,373,913 - MPMX20_02262 0.87 +1.2
2,373,970 - -0.6
2,374,043 + -0.7
2,374,049 - -2.4
2,374,347 + MPMX20_02263 0.13 +0.2
2,374,347 - MPMX20_02263 0.13 +1.0
2,374,357 - MPMX20_02263 0.15 +1.2
2,374,362 - MPMX20_02263 0.15 -1.6
2,374,367 + MPMX20_02263 0.16 -2.5
2,374,424 - MPMX20_02263 0.23 -0.0
2,374,451 + MPMX20_02263 0.26 +0.2
2,374,479 + MPMX20_02263 0.30 -0.6
2,374,487 - MPMX20_02263 0.31 +1.2
2,374,510 - MPMX20_02263 0.34 -1.7
2,374,555 - MPMX20_02263 0.40 -0.8
2,374,679 + MPMX20_02263 0.55 +0.6
2,374,712 + MPMX20_02263 0.60 +1.6
2,374,845 - MPMX20_02263 0.76 -1.3
2,374,850 + MPMX20_02263 0.77 +4.5
2,374,858 - MPMX20_02263 0.78 -1.8
2,374,919 - MPMX20_02263 0.86 -0.4
2,374,925 + MPMX20_02263 0.87 +1.0
2,374,944 + MPMX20_02263 0.89 -1.1
2,374,944 + MPMX20_02263 0.89 +2.0
2,374,950 - MPMX20_02263 0.90 -1.4
2,374,966 - -0.7
2,374,991 + -3.1
2,374,992 + -1.9
2,374,995 - -0.4
2,375,046 + -2.9
2,375,056 - -0.2
2,375,163 + MPMX20_02264 0.13 -0.5
2,375,171 - MPMX20_02264 0.14 +0.6
2,375,173 - MPMX20_02264 0.14 -0.6
2,375,178 - MPMX20_02264 0.15 -2.3
2,375,178 - MPMX20_02264 0.15 -0.8
2,375,214 + MPMX20_02264 0.19 +0.2
2,375,227 + MPMX20_02264 0.21 -2.2
2,375,260 + MPMX20_02264 0.25 +0.8
2,375,268 - MPMX20_02264 0.26 +0.1
2,375,278 - MPMX20_02264 0.27 -2.7
2,375,283 + MPMX20_02264 0.28 -1.0
2,375,397 + MPMX20_02264 0.42 +1.2
2,375,413 - MPMX20_02264 0.44 +0.7
2,375,534 + MPMX20_02264 0.59 -0.6
2,375,535 + MPMX20_02264 0.60 -0.5
2,375,576 + MPMX20_02264 0.65 +1.8
2,375,582 + MPMX20_02264 0.65 -0.3
2,375,584 - MPMX20_02264 0.66 -2.4
2,375,652 - MPMX20_02264 0.74 +1.5
2,375,763 + MPMX20_02264 0.88 +0.1
2,375,825 - +1.0
2,375,837 - -1.6
2,375,847 - -0.6
2,375,910 - -0.6
2,375,912 + +0.8
2,375,966 + -0.8
2,375,966 + -1.6
2,375,974 - -1.5
2,375,974 - -1.1
2,375,974 - -0.5
2,375,981 + -1.6
2,375,981 + -2.6
2,375,989 + +0.5
2,375,990 - -2.0

Or see this region's nucleotide sequence