Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00810

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00809 and MPMX20_00810 are separated by 52 nucleotidesMPMX20_00810 and MPMX20_00811 are separated by 10 nucleotides MPMX20_00809: MPMX20_00809 - Dihydrolipoyl dehydrogenase, at 849,122 to 850,546 _00809 MPMX20_00810: MPMX20_00810 - hypothetical protein, at 850,599 to 851,390 _00810 MPMX20_00811: MPMX20_00811 - hypothetical protein, at 851,401 to 852,930 _00811 Position (kb) 850 851 852Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 850.519 kb on + strandat 850.606 kb on - strandat 850.620 kb on + strandat 850.639 kb on + strandat 850.642 kb on + strandat 850.679 kb on + strand, within MPMX20_00810at 850.730 kb on - strand, within MPMX20_00810at 850.758 kb on - strand, within MPMX20_00810at 850.814 kb on - strand, within MPMX20_00810at 850.861 kb on - strand, within MPMX20_00810at 850.874 kb on + strand, within MPMX20_00810at 850.877 kb on - strand, within MPMX20_00810at 850.882 kb on - strand, within MPMX20_00810at 850.884 kb on + strand, within MPMX20_00810at 850.943 kb on + strand, within MPMX20_00810at 851.399 kb on + strandat 851.424 kb on + strandat 851.432 kb on - strandat 851.482 kb on + strandat 851.490 kb on - strandat 852.070 kb on - strand, within MPMX20_00811at 852.138 kb on + strand, within MPMX20_00811at 852.139 kb on + strand, within MPMX20_00811at 852.145 kb on + strand, within MPMX20_00811at 852.152 kb on + strand, within MPMX20_00811at 852.210 kb on + strand, within MPMX20_00811at 852.242 kb on + strand, within MPMX20_00811

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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850,519 + +0.7
850,606 - -1.3
850,620 + -1.0
850,639 + +0.3
850,642 + -0.1
850,679 + MPMX20_00810 0.10 +2.9
850,730 - MPMX20_00810 0.17 +2.3
850,758 - MPMX20_00810 0.20 -2.1
850,814 - MPMX20_00810 0.27 +1.0
850,861 - MPMX20_00810 0.33 -2.0
850,874 + MPMX20_00810 0.35 +0.8
850,877 - MPMX20_00810 0.35 +1.2
850,882 - MPMX20_00810 0.36 +0.0
850,884 + MPMX20_00810 0.36 -0.1
850,943 + MPMX20_00810 0.43 +0.8
851,399 + -0.1
851,424 + -3.5
851,432 - +0.3
851,482 + +1.1
851,490 - +0.0
852,070 - MPMX20_00811 0.44 -0.9
852,138 + MPMX20_00811 0.48 -1.5
852,139 + MPMX20_00811 0.48 +0.6
852,145 + MPMX20_00811 0.49 +0.6
852,152 + MPMX20_00811 0.49 -1.5
852,210 + MPMX20_00811 0.53 -2.4
852,242 + MPMX20_00811 0.55 -0.1

Or see this region's nucleotide sequence