Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00290

Experiment: TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00289 and MPMX20_00290 overlap by 4 nucleotidesMPMX20_00290 and MPMX20_00291 are separated by 70 nucleotides MPMX20_00289: MPMX20_00289 - Cation/acetate symporter ActP, at 307,747 to 309,396 _00289 MPMX20_00290: MPMX20_00290 - Inner membrane protein YjcH, at 309,393 to 309,707 _00290 MPMX20_00291: MPMX20_00291 - Acetyl-coenzyme A synthetase, at 309,778 to 311,736 _00291 Position (kb) 309 310Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 308.428 kb on + strand, within MPMX20_00289at 308.431 kb on - strand, within MPMX20_00289at 308.517 kb on + strand, within MPMX20_00289at 308.529 kb on + strand, within MPMX20_00289at 308.594 kb on - strand, within MPMX20_00289at 308.636 kb on + strand, within MPMX20_00289at 308.662 kb on - strand, within MPMX20_00289at 308.683 kb on - strand, within MPMX20_00289at 308.790 kb on - strand, within MPMX20_00289at 308.798 kb on + strand, within MPMX20_00289at 308.820 kb on - strand, within MPMX20_00289at 308.856 kb on + strand, within MPMX20_00289at 308.917 kb on - strand, within MPMX20_00289at 308.917 kb on - strand, within MPMX20_00289at 308.928 kb on + strand, within MPMX20_00289at 308.952 kb on - strand, within MPMX20_00289at 308.952 kb on - strand, within MPMX20_00289at 308.970 kb on + strand, within MPMX20_00289at 308.970 kb on + strand, within MPMX20_00289at 309.009 kb on + strand, within MPMX20_00289at 309.058 kb on + strand, within MPMX20_00289at 309.066 kb on - strand, within MPMX20_00289at 309.099 kb on - strand, within MPMX20_00289at 309.104 kb on + strand, within MPMX20_00289at 309.104 kb on + strand, within MPMX20_00289at 309.104 kb on + strand, within MPMX20_00289at 309.104 kb on + strand, within MPMX20_00289at 309.111 kb on - strand, within MPMX20_00289at 309.111 kb on - strand, within MPMX20_00289at 309.112 kb on - strand, within MPMX20_00289at 309.112 kb on - strand, within MPMX20_00289at 309.112 kb on - strand, within MPMX20_00289at 309.112 kb on - strand, within MPMX20_00289at 309.112 kb on - strand, within MPMX20_00289at 309.203 kb on + strand, within MPMX20_00289at 309.203 kb on + strand, within MPMX20_00289at 309.213 kb on + strand, within MPMX20_00289at 309.256 kb on - strandat 309.258 kb on - strandat 309.318 kb on + strandat 309.371 kb on - strandat 309.389 kb on - strandat 309.408 kb on - strandat 309.411 kb on + strandat 309.421 kb on + strandat 309.429 kb on - strand, within MPMX20_00290at 309.461 kb on + strand, within MPMX20_00290at 309.479 kb on - strand, within MPMX20_00290at 309.505 kb on - strand, within MPMX20_00290at 309.561 kb on + strand, within MPMX20_00290at 309.563 kb on - strand, within MPMX20_00290at 309.574 kb on - strand, within MPMX20_00290at 309.579 kb on + strand, within MPMX20_00290at 309.584 kb on + strand, within MPMX20_00290at 309.584 kb on + strand, within MPMX20_00290at 309.584 kb on + strand, within MPMX20_00290at 309.592 kb on - strand, within MPMX20_00290at 309.592 kb on - strand, within MPMX20_00290at 309.656 kb on + strand, within MPMX20_00290at 309.665 kb on + strand, within MPMX20_00290at 309.666 kb on - strand, within MPMX20_00290at 309.678 kb on + strandat 309.713 kb on - strandat 309.713 kb on - strandat 309.754 kb on + strandat 309.762 kb on - strandat 309.799 kb on - strandat 309.799 kb on - strandat 309.799 kb on - strandat 309.845 kb on - strandat 309.851 kb on - strandat 309.862 kb on - strandat 309.901 kb on + strandat 309.937 kb on + strandat 309.949 kb on - strandat 309.949 kb on - strandat 309.954 kb on - strandat 310.010 kb on - strand, within MPMX20_00291at 310.014 kb on + strand, within MPMX20_00291at 310.014 kb on + strand, within MPMX20_00291at 310.019 kb on + strand, within MPMX20_00291at 310.022 kb on - strand, within MPMX20_00291at 310.034 kb on - strand, within MPMX20_00291at 310.174 kb on + strand, within MPMX20_00291at 310.284 kb on - strand, within MPMX20_00291at 310.289 kb on - strand, within MPMX20_00291at 310.401 kb on + strand, within MPMX20_00291at 310.401 kb on + strand, within MPMX20_00291at 310.425 kb on - strand, within MPMX20_00291at 310.425 kb on - strand, within MPMX20_00291at 310.436 kb on + strand, within MPMX20_00291at 310.436 kb on + strand, within MPMX20_00291at 310.436 kb on + strand, within MPMX20_00291at 310.436 kb on + strand, within MPMX20_00291at 310.444 kb on - strand, within MPMX20_00291at 310.458 kb on + strand, within MPMX20_00291at 310.458 kb on + strand, within MPMX20_00291at 310.458 kb on + strand, within MPMX20_00291at 310.458 kb on + strand, within MPMX20_00291at 310.466 kb on - strand, within MPMX20_00291at 310.466 kb on - strand, within MPMX20_00291at 310.466 kb on - strand, within MPMX20_00291at 310.466 kb on - strand, within MPMX20_00291at 310.478 kb on - strand, within MPMX20_00291at 310.494 kb on + strand, within MPMX20_00291at 310.494 kb on + strand, within MPMX20_00291at 310.494 kb on + strand, within MPMX20_00291at 310.494 kb on + strand, within MPMX20_00291at 310.494 kb on + strand, within MPMX20_00291at 310.502 kb on - strand, within MPMX20_00291at 310.502 kb on - strand, within MPMX20_00291at 310.659 kb on + strand, within MPMX20_00291at 310.687 kb on - strand, within MPMX20_00291

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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308,428 + MPMX20_00289 0.41 -0.9
308,431 - MPMX20_00289 0.41 -1.4
308,517 + MPMX20_00289 0.47 -2.4
308,529 + MPMX20_00289 0.47 +0.4
308,594 - MPMX20_00289 0.51 -0.6
308,636 + MPMX20_00289 0.54 -0.1
308,662 - MPMX20_00289 0.55 -3.6
308,683 - MPMX20_00289 0.57 -0.6
308,790 - MPMX20_00289 0.63 -0.7
308,798 + MPMX20_00289 0.64 -2.9
308,820 - MPMX20_00289 0.65 +0.1
308,856 + MPMX20_00289 0.67 +0.1
308,917 - MPMX20_00289 0.71 -1.5
308,917 - MPMX20_00289 0.71 -0.0
308,928 + MPMX20_00289 0.72 +1.2
308,952 - MPMX20_00289 0.73 +0.8
308,952 - MPMX20_00289 0.73 -0.9
308,970 + MPMX20_00289 0.74 -3.6
308,970 + MPMX20_00289 0.74 +4.7
309,009 + MPMX20_00289 0.76 -4.2
309,058 + MPMX20_00289 0.79 -1.7
309,066 - MPMX20_00289 0.80 -1.8
309,099 - MPMX20_00289 0.82 +1.9
309,104 + MPMX20_00289 0.82 -0.1
309,104 + MPMX20_00289 0.82 -1.7
309,104 + MPMX20_00289 0.82 -0.1
309,104 + MPMX20_00289 0.82 -2.3
309,111 - MPMX20_00289 0.83 -1.9
309,111 - MPMX20_00289 0.83 -1.0
309,112 - MPMX20_00289 0.83 +1.9
309,112 - MPMX20_00289 0.83 -1.0
309,112 - MPMX20_00289 0.83 +0.3
309,112 - MPMX20_00289 0.83 +0.3
309,112 - MPMX20_00289 0.83 -0.2
309,203 + MPMX20_00289 0.88 +2.3
309,203 + MPMX20_00289 0.88 -0.1
309,213 + MPMX20_00289 0.89 -1.8
309,256 - +0.5
309,258 - +0.3
309,318 + -0.2
309,371 - -3.0
309,389 - +2.7
309,408 - -0.3
309,411 + -0.6
309,421 + -0.9
309,429 - MPMX20_00290 0.11 -0.8
309,461 + MPMX20_00290 0.22 +1.7
309,479 - MPMX20_00290 0.27 -1.1
309,505 - MPMX20_00290 0.36 +0.1
309,561 + MPMX20_00290 0.53 +1.9
309,563 - MPMX20_00290 0.54 -1.0
309,574 - MPMX20_00290 0.57 +1.5
309,579 + MPMX20_00290 0.59 -1.0
309,584 + MPMX20_00290 0.61 -1.1
309,584 + MPMX20_00290 0.61 +0.9
309,584 + MPMX20_00290 0.61 -1.3
309,592 - MPMX20_00290 0.63 -1.5
309,592 - MPMX20_00290 0.63 -1.8
309,656 + MPMX20_00290 0.83 +1.7
309,665 + MPMX20_00290 0.86 +4.9
309,666 - MPMX20_00290 0.87 +1.6
309,678 + +1.1
309,713 - +3.3
309,713 - -0.7
309,754 + -0.4
309,762 - -1.5
309,799 - -0.3
309,799 - -2.1
309,799 - -2.6
309,845 - -2.1
309,851 - -1.5
309,862 - -4.2
309,901 + -0.8
309,937 + -0.5
309,949 - -0.2
309,949 - -0.4
309,954 - +1.7
310,010 - MPMX20_00291 0.12 -0.8
310,014 + MPMX20_00291 0.12 +0.3
310,014 + MPMX20_00291 0.12 -4.0
310,019 + MPMX20_00291 0.12 -1.9
310,022 - MPMX20_00291 0.12 +1.1
310,034 - MPMX20_00291 0.13 -1.3
310,174 + MPMX20_00291 0.20 -3.2
310,284 - MPMX20_00291 0.26 -0.5
310,289 - MPMX20_00291 0.26 -1.4
310,401 + MPMX20_00291 0.32 -0.1
310,401 + MPMX20_00291 0.32 +0.2
310,425 - MPMX20_00291 0.33 +1.1
310,425 - MPMX20_00291 0.33 -0.7
310,436 + MPMX20_00291 0.34 +1.3
310,436 + MPMX20_00291 0.34 -1.1
310,436 + MPMX20_00291 0.34 -2.9
310,436 + MPMX20_00291 0.34 -0.6
310,444 - MPMX20_00291 0.34 -2.1
310,458 + MPMX20_00291 0.35 +0.4
310,458 + MPMX20_00291 0.35 -1.5
310,458 + MPMX20_00291 0.35 -0.5
310,458 + MPMX20_00291 0.35 -1.5
310,466 - MPMX20_00291 0.35 -0.8
310,466 - MPMX20_00291 0.35 +0.5
310,466 - MPMX20_00291 0.35 -1.6
310,466 - MPMX20_00291 0.35 +0.6
310,478 - MPMX20_00291 0.36 +0.1
310,494 + MPMX20_00291 0.37 -2.1
310,494 + MPMX20_00291 0.37 -1.8
310,494 + MPMX20_00291 0.37 -1.0
310,494 + MPMX20_00291 0.37 +0.8
310,494 + MPMX20_00291 0.37 -3.3
310,502 - MPMX20_00291 0.37 -0.6
310,502 - MPMX20_00291 0.37 -1.2
310,659 + MPMX20_00291 0.45 -3.3
310,687 - MPMX20_00291 0.46 -1.3

Or see this region's nucleotide sequence