Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02545

Experiment: LB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02543 and MPMX20_02544 are separated by 136 nucleotidesMPMX20_02544 and MPMX20_02545 are separated by 37 nucleotidesMPMX20_02545 and MPMX20_02546 are separated by 248 nucleotides MPMX20_02543: MPMX20_02543 - NADH dehydrogenase-like protein, at 2,681,457 to 2,682,662 _02543 MPMX20_02544: MPMX20_02544 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX, at 2,682,799 to 2,683,551 _02544 MPMX20_02545: MPMX20_02545 - hypothetical protein, at 2,683,589 to 2,683,936 _02545 MPMX20_02546: MPMX20_02546 - hypothetical protein, at 2,684,185 to 2,685,075 _02546 Position (kb) 2683 2684Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2682.595 kb on - strandat 2682.595 kb on - strandat 2682.595 kb on - strandat 2682.595 kb on - strandat 2682.595 kb on - strandat 2682.622 kb on - strandat 2682.623 kb on - strandat 2682.678 kb on - strandat 2682.678 kb on - strandat 2682.678 kb on - strandat 2682.678 kb on - strandat 2682.678 kb on - strandat 2682.678 kb on - strandat 2682.713 kb on - strandat 2682.714 kb on - strandat 2682.729 kb on - strandat 2682.792 kb on - strandat 2682.804 kb on - strandat 2682.806 kb on - strandat 2682.839 kb on - strandat 2682.839 kb on - strandat 2682.851 kb on - strandat 2682.851 kb on - strandat 2682.851 kb on - strandat 2682.851 kb on - strandat 2682.861 kb on - strandat 2682.861 kb on - strandat 2682.879 kb on - strand, within MPMX20_02544at 2682.879 kb on - strand, within MPMX20_02544at 2682.879 kb on - strand, within MPMX20_02544at 2682.879 kb on - strand, within MPMX20_02544at 2682.889 kb on - strand, within MPMX20_02544at 2682.891 kb on - strand, within MPMX20_02544at 2682.894 kb on + strand, within MPMX20_02544at 2682.902 kb on - strand, within MPMX20_02544at 2682.902 kb on - strand, within MPMX20_02544at 2682.902 kb on - strand, within MPMX20_02544at 2682.907 kb on - strand, within MPMX20_02544at 2682.913 kb on + strand, within MPMX20_02544at 2682.921 kb on - strand, within MPMX20_02544at 2682.926 kb on - strand, within MPMX20_02544at 2682.929 kb on - strand, within MPMX20_02544at 2683.004 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.005 kb on + strand, within MPMX20_02544at 2683.011 kb on + strand, within MPMX20_02544at 2683.030 kb on + strand, within MPMX20_02544at 2683.040 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.041 kb on + strand, within MPMX20_02544at 2683.053 kb on + strand, within MPMX20_02544at 2683.055 kb on + strand, within MPMX20_02544at 2683.063 kb on + strand, within MPMX20_02544at 2683.065 kb on + strand, within MPMX20_02544at 2683.085 kb on + strand, within MPMX20_02544at 2683.085 kb on + strand, within MPMX20_02544at 2683.085 kb on + strand, within MPMX20_02544at 2683.097 kb on + strand, within MPMX20_02544at 2683.097 kb on + strand, within MPMX20_02544at 2683.097 kb on + strand, within MPMX20_02544at 2683.131 kb on + strand, within MPMX20_02544at 2683.131 kb on + strand, within MPMX20_02544at 2683.485 kb on - strandat 2683.577 kb on - strandat 2683.593 kb on - strandat 2683.599 kb on - strandat 2683.599 kb on - strandat 2683.600 kb on - strandat 2683.601 kb on - strandat 2683.601 kb on - strandat 2683.653 kb on - strand, within MPMX20_02545at 2683.653 kb on - strand, within MPMX20_02545at 2683.658 kb on - strand, within MPMX20_02545at 2683.658 kb on - strand, within MPMX20_02545at 2683.658 kb on - strand, within MPMX20_02545at 2683.658 kb on - strand, within MPMX20_02545at 2683.677 kb on - strand, within MPMX20_02545at 2683.677 kb on - strand, within MPMX20_02545at 2683.682 kb on - strand, within MPMX20_02545at 2683.687 kb on - strand, within MPMX20_02545at 2683.687 kb on - strand, within MPMX20_02545at 2683.687 kb on - strand, within MPMX20_02545at 2683.687 kb on - strand, within MPMX20_02545at 2683.687 kb on - strand, within MPMX20_02545at 2683.692 kb on - strand, within MPMX20_02545at 2683.692 kb on - strand, within MPMX20_02545at 2683.692 kb on - strand, within MPMX20_02545at 2683.692 kb on - strand, within MPMX20_02545at 2683.692 kb on - strand, within MPMX20_02545at 2683.699 kb on - strand, within MPMX20_02545at 2683.699 kb on - strand, within MPMX20_02545at 2683.699 kb on - strand, within MPMX20_02545at 2683.704 kb on - strand, within MPMX20_02545at 2683.719 kb on - strand, within MPMX20_02545at 2683.727 kb on - strand, within MPMX20_02545at 2683.745 kb on - strand, within MPMX20_02545at 2683.756 kb on + strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.764 kb on - strand, within MPMX20_02545at 2683.794 kb on - strand, within MPMX20_02545at 2683.829 kb on - strand, within MPMX20_02545at 2683.844 kb on - strand, within MPMX20_02545at 2683.847 kb on - strand, within MPMX20_02545at 2683.873 kb on - strand, within MPMX20_02545at 2683.873 kb on - strand, within MPMX20_02545at 2683.884 kb on - strand, within MPMX20_02545at 2683.896 kb on - strand, within MPMX20_02545at 2683.896 kb on - strand, within MPMX20_02545at 2683.896 kb on - strand, within MPMX20_02545at 2683.899 kb on - strand, within MPMX20_02545at 2683.913 kb on - strandat 2683.913 kb on - strandat 2683.921 kb on + strandat 2683.921 kb on + strandat 2683.921 kb on + strandat 2683.921 kb on + strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.929 kb on - strandat 2683.938 kb on + strandat 2683.945 kb on + strandat 2683.946 kb on - strandat 2683.946 kb on - strandat 2683.946 kb on - strandat 2683.946 kb on - strandat 2683.955 kb on + strandat 2683.956 kb on - strandat 2683.961 kb on + strandat 2683.961 kb on + strandat 2683.961 kb on - strandat 2683.963 kb on + strandat 2683.963 kb on + strandat 2683.963 kb on + strandat 2683.968 kb on + strandat 2683.969 kb on - strandat 2683.969 kb on - strandat 2683.971 kb on - strandat 2683.971 kb on - strandat 2683.971 kb on - strandat 2683.971 kb on - strandat 2683.971 kb on - strandat 2683.971 kb on - strandat 2683.988 kb on + strandat 2683.993 kb on + strandat 2683.995 kb on + strandat 2684.000 kb on + strandat 2684.014 kb on - strandat 2684.123 kb on + strandat 2684.123 kb on + strandat 2684.123 kb on + strandat 2684.127 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.132 kb on + strandat 2684.135 kb on - strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.137 kb on + strandat 2684.147 kb on + strandat 2684.155 kb on + strandat 2684.155 kb on + strandat 2684.155 kb on + strandat 2684.155 kb on + strandat 2684.155 kb on + strandat 2684.155 kb on + strandat 2684.158 kb on + strandat 2684.180 kb on + strandat 2684.267 kb on + strandat 2684.350 kb on + strand, within MPMX20_02546at 2684.355 kb on + strand, within MPMX20_02546at 2684.498 kb on + strand, within MPMX20_02546at 2684.506 kb on - strand, within MPMX20_02546at 2684.828 kb on + strand, within MPMX20_02546

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
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2,682,595 - -0.3
2,682,595 - +1.3
2,682,595 - -0.1
2,682,595 - +0.6
2,682,595 - -0.5
2,682,622 - -1.6
2,682,623 - +1.3
2,682,678 - +0.9
2,682,678 - -2.1
2,682,678 - -1.5
2,682,678 - +0.5
2,682,678 - +1.9
2,682,678 - +1.9
2,682,713 - +0.9
2,682,714 - +0.5
2,682,729 - +0.5
2,682,792 - -1.2
2,682,804 - +1.3
2,682,806 - +2.0
2,682,839 - +1.3
2,682,839 - -0.9
2,682,851 - +1.9
2,682,851 - -0.7
2,682,851 - -2.0
2,682,851 - +1.3
2,682,861 - +0.9
2,682,861 - -1.7
2,682,879 - MPMX20_02544 0.11 +0.3
2,682,879 - MPMX20_02544 0.11 -0.9
2,682,879 - MPMX20_02544 0.11 -0.7
2,682,879 - MPMX20_02544 0.11 -1.7
2,682,889 - MPMX20_02544 0.12 -2.2
2,682,891 - MPMX20_02544 0.12 -0.4
2,682,894 + MPMX20_02544 0.13 -0.6
2,682,902 - MPMX20_02544 0.14 -1.3
2,682,902 - MPMX20_02544 0.14 -2.2
2,682,902 - MPMX20_02544 0.14 +1.9
2,682,907 - MPMX20_02544 0.14 -0.7
2,682,913 + MPMX20_02544 0.15 +0.9
2,682,921 - MPMX20_02544 0.16 -3.4
2,682,926 - MPMX20_02544 0.17 +1.9
2,682,929 - MPMX20_02544 0.17 +1.3
2,683,004 + MPMX20_02544 0.27 +0.9
2,683,005 + MPMX20_02544 0.27 +3.9
2,683,005 + MPMX20_02544 0.27 +0.4
2,683,005 + MPMX20_02544 0.27 -1.5
2,683,005 + MPMX20_02544 0.27 -0.4
2,683,005 + MPMX20_02544 0.27 -0.7
2,683,005 + MPMX20_02544 0.27 +0.7
2,683,005 + MPMX20_02544 0.27 +0.2
2,683,005 + MPMX20_02544 0.27 -1.6
2,683,005 + MPMX20_02544 0.27 +1.7
2,683,005 + MPMX20_02544 0.27 +0.9
2,683,005 + MPMX20_02544 0.27 +3.8
2,683,005 + MPMX20_02544 0.27 -1.5
2,683,005 + MPMX20_02544 0.27 +1.7
2,683,005 + MPMX20_02544 0.27 -1.6
2,683,005 + MPMX20_02544 0.27 +0.9
2,683,005 + MPMX20_02544 0.27 -0.5
2,683,005 + MPMX20_02544 0.27 -2.0
2,683,005 + MPMX20_02544 0.27 -2.8
2,683,005 + MPMX20_02544 0.27 -2.0
2,683,005 + MPMX20_02544 0.27 +0.1
2,683,005 + MPMX20_02544 0.27 -1.5
2,683,011 + MPMX20_02544 0.28 -2.5
2,683,030 + MPMX20_02544 0.31 +2.9
2,683,040 + MPMX20_02544 0.32 -1.0
2,683,041 + MPMX20_02544 0.32 +0.9
2,683,041 + MPMX20_02544 0.32 -2.3
2,683,041 + MPMX20_02544 0.32 -1.6
2,683,041 + MPMX20_02544 0.32 -3.0
2,683,041 + MPMX20_02544 0.32 -0.6
2,683,041 + MPMX20_02544 0.32 +0.1
2,683,041 + MPMX20_02544 0.32 +2.9
2,683,041 + MPMX20_02544 0.32 +3.9
2,683,041 + MPMX20_02544 0.32 -0.8
2,683,041 + MPMX20_02544 0.32 -0.8
2,683,053 + MPMX20_02544 0.34 +0.5
2,683,055 + MPMX20_02544 0.34 -2.1
2,683,063 + MPMX20_02544 0.35 -3.1
2,683,065 + MPMX20_02544 0.35 +1.3
2,683,085 + MPMX20_02544 0.38 -0.7
2,683,085 + MPMX20_02544 0.38 -1.0
2,683,085 + MPMX20_02544 0.38 +2.9
2,683,097 + MPMX20_02544 0.40 -3.2
2,683,097 + MPMX20_02544 0.40 +0.4
2,683,097 + MPMX20_02544 0.40 +0.3
2,683,131 + MPMX20_02544 0.44 -0.1
2,683,131 + MPMX20_02544 0.44 +2.9
2,683,485 - -1.1
2,683,577 - +0.5
2,683,593 - -0.3
2,683,599 - -1.5
2,683,599 - -0.1
2,683,600 - -1.0
2,683,601 - -0.9
2,683,601 - -0.8
2,683,653 - MPMX20_02545 0.18 -2.0
2,683,653 - MPMX20_02545 0.18 -0.9
2,683,658 - MPMX20_02545 0.20 +0.9
2,683,658 - MPMX20_02545 0.20 -1.3
2,683,658 - MPMX20_02545 0.20 +0.3
2,683,658 - MPMX20_02545 0.20 -0.8
2,683,677 - MPMX20_02545 0.25 +0.3
2,683,677 - MPMX20_02545 0.25 -1.5
2,683,682 - MPMX20_02545 0.27 -1.9
2,683,687 - MPMX20_02545 0.28 +0.3
2,683,687 - MPMX20_02545 0.28 -1.8
2,683,687 - MPMX20_02545 0.28 -1.1
2,683,687 - MPMX20_02545 0.28 -2.3
2,683,687 - MPMX20_02545 0.28 +1.3
2,683,692 - MPMX20_02545 0.30 -0.3
2,683,692 - MPMX20_02545 0.30 -1.5
2,683,692 - MPMX20_02545 0.30 -1.7
2,683,692 - MPMX20_02545 0.30 -0.1
2,683,692 - MPMX20_02545 0.30 -1.2
2,683,699 - MPMX20_02545 0.32 +1.4
2,683,699 - MPMX20_02545 0.32 -1.5
2,683,699 - MPMX20_02545 0.32 -0.1
2,683,704 - MPMX20_02545 0.33 -0.5
2,683,719 - MPMX20_02545 0.37 -1.2
2,683,727 - MPMX20_02545 0.40 -1.8
2,683,745 - MPMX20_02545 0.45 -1.5
2,683,756 + MPMX20_02545 0.48 -1.3
2,683,764 - MPMX20_02545 0.50 -1.0
2,683,764 - MPMX20_02545 0.50 -0.3
2,683,764 - MPMX20_02545 0.50 -3.0
2,683,764 - MPMX20_02545 0.50 +0.9
2,683,764 - MPMX20_02545 0.50 -0.9
2,683,764 - MPMX20_02545 0.50 -0.9
2,683,764 - MPMX20_02545 0.50 -1.4
2,683,764 - MPMX20_02545 0.50 +0.5
2,683,764 - MPMX20_02545 0.50 -1.4
2,683,794 - MPMX20_02545 0.59 -1.0
2,683,829 - MPMX20_02545 0.69 +0.5
2,683,844 - MPMX20_02545 0.73 -1.3
2,683,847 - MPMX20_02545 0.74 -0.5
2,683,873 - MPMX20_02545 0.82 -0.7
2,683,873 - MPMX20_02545 0.82 +0.4
2,683,884 - MPMX20_02545 0.85 -0.7
2,683,896 - MPMX20_02545 0.88 +0.4
2,683,896 - MPMX20_02545 0.88 -2.4
2,683,896 - MPMX20_02545 0.88 +0.1
2,683,899 - MPMX20_02545 0.89 -0.2
2,683,913 - +1.2
2,683,913 - -2.2
2,683,921 + +1.3
2,683,921 + +0.9
2,683,921 + -2.9
2,683,921 + -0.3
2,683,929 - -0.6
2,683,929 - -0.7
2,683,929 - +0.3
2,683,929 - -1.5
2,683,929 - -1.4
2,683,929 - -1.7
2,683,929 - +2.5
2,683,929 - -1.7
2,683,929 - -0.1
2,683,929 - +0.3
2,683,929 - +0.1
2,683,929 - -0.5
2,683,938 + +0.9
2,683,945 + +5.6
2,683,946 - -0.5
2,683,946 - -0.6
2,683,946 - -1.4
2,683,946 - -1.7
2,683,955 + -0.9
2,683,956 - -1.5
2,683,961 + -0.1
2,683,961 + -1.7
2,683,961 - +1.5
2,683,963 + -0.7
2,683,963 + +0.1
2,683,963 + +0.1
2,683,968 + -0.8
2,683,969 - +0.1
2,683,969 - -0.3
2,683,971 - -0.9
2,683,971 - -0.6
2,683,971 - +0.3
2,683,971 - -1.0
2,683,971 - -0.1
2,683,971 - +1.3
2,683,988 + +0.3
2,683,993 + -1.8
2,683,995 + +2.9
2,684,000 + -1.5
2,684,014 - +0.3
2,684,123 + -1.7
2,684,123 + +1.1
2,684,123 + -0.3
2,684,127 + -0.9
2,684,132 + -0.9
2,684,132 + +0.3
2,684,132 + +1.9
2,684,132 + +2.9
2,684,132 + +1.3
2,684,132 + +1.5
2,684,132 + +0.9
2,684,132 + -0.8
2,684,132 + -1.1
2,684,132 + +1.3
2,684,135 - -0.1
2,684,137 + +0.9
2,684,137 + -0.7
2,684,137 + +1.4
2,684,137 + +1.9
2,684,137 + -0.9
2,684,137 + -0.1
2,684,137 + +0.5
2,684,137 + +0.5
2,684,137 + +0.5
2,684,137 + -1.8
2,684,137 + -0.3
2,684,147 + +0.8
2,684,155 + +0.1
2,684,155 + -1.3
2,684,155 + +0.9
2,684,155 + +0.9
2,684,155 + +0.3
2,684,155 + +1.9
2,684,158 + -2.7
2,684,180 + -2.0
2,684,267 + +1.9
2,684,350 + MPMX20_02546 0.19 +1.3
2,684,355 + MPMX20_02546 0.19 +0.5
2,684,498 + MPMX20_02546 0.35 +1.9
2,684,506 - MPMX20_02546 0.36 -1.5
2,684,828 + MPMX20_02546 0.72 +0.9

Or see this region's nucleotide sequence