Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11450

Experiment: Time0_washed

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_washed
2,537,687	+		LRK54_RS11445	0.13	+1.0
2,537,687	+		LRK54_RS11445	0.13	-1.5
2,537,687	+		LRK54_RS11445	0.13	-0.0
2,537,687	+		LRK54_RS11445	0.13	-0.3
2,537,687	+		LRK54_RS11445	0.13	+1.9
2,537,687	+		LRK54_RS11445	0.13	+0.5
2,537,687	+		LRK54_RS11445	0.13	-0.6
2,537,687	+		LRK54_RS11445	0.13	+0.2
2,537,687	+		LRK54_RS11445	0.13	-0.5
2,537,687	+		LRK54_RS11445	0.13	-0.6
2,537,687	+		LRK54_RS11445	0.13	-0.1
2,537,687	+		LRK54_RS11445	0.13	+0.5
2,537,687	+		LRK54_RS11445	0.13	+0.0
2,537,687	+		LRK54_RS11445	0.13	-0.6
2,537,688	-		LRK54_RS11445	0.13	+0.1
2,537,688	-		LRK54_RS11445	0.13	-0.5
2,537,688	-		LRK54_RS11445	0.13	-0.5
2,537,688	-		LRK54_RS11445	0.13	-0.8
2,537,688	-		LRK54_RS11445	0.13	-0.2
2,537,688	-		LRK54_RS11445	0.13	+2.3
2,537,688	-		LRK54_RS11445	0.13	-0.5
2,537,688	-		LRK54_RS11445	0.13	-0.5
2,537,688	-		LRK54_RS11445	0.13	-0.3
2,537,688	-		LRK54_RS11445	0.13	+0.5
2,537,688	-		LRK54_RS11445	0.13	-1.7
2,537,780	+		LRK54_RS11445	0.21	-0.9
2,537,854	-		LRK54_RS11445	0.28	-1.5
2,538,149	+		LRK54_RS11445	0.54	-0.7
2,538,149	+		LRK54_RS11445	0.54	-1.4
2,538,149	+		LRK54_RS11445	0.54	+1.0
2,538,149	+		LRK54_RS11445	0.54	-0.1
2,538,170	+		LRK54_RS11445	0.56	-0.6
2,538,170	+		LRK54_RS11445	0.56	-0.3
2,538,170	+		LRK54_RS11445	0.56	-0.8
2,538,170	+		LRK54_RS11445	0.56	-0.2
2,538,170	+		LRK54_RS11445	0.56	+0.4
2,538,170	+		LRK54_RS11445	0.56	-0.7
2,538,170	+		LRK54_RS11445	0.56	-0.8
2,538,171	-		LRK54_RS11445	0.56	-0.8
2,538,171	-		LRK54_RS11445	0.56	-0.5
2,538,171	-		LRK54_RS11445	0.56	+1.5
2,538,171	-		LRK54_RS11445	0.56	-1.0
2,538,171	-		LRK54_RS11445	0.56	+1.1
2,538,171	-		LRK54_RS11445	0.56	-0.5
2,538,172	+		LRK54_RS11445	0.56	-0.5
2,538,173	+		LRK54_RS11445	0.56	+0.5
2,538,173	+		LRK54_RS11445	0.56	+1.1
2,538,173	+		LRK54_RS11445	0.56	-0.3
2,538,173	+		LRK54_RS11445	0.56	-2.3
2,538,173	+		LRK54_RS11445	0.56	-0.5
2,538,173	+		LRK54_RS11445	0.56	-0.6
2,538,173	+		LRK54_RS11445	0.56	-0.7
2,538,173	+		LRK54_RS11445	0.56	-0.3
2,538,173	+		LRK54_RS11445	0.56	-0.6
2,538,173	+		LRK54_RS11445	0.56	-0.7
2,538,173	+		LRK54_RS11445	0.56	-1.4
2,538,173	+		LRK54_RS11445	0.56	-0.2
2,538,173	+		LRK54_RS11445	0.56	-0.0
2,538,173	+		LRK54_RS11445	0.56	+0.1
2,538,173	+		LRK54_RS11445	0.56	+0.5
2,538,173	+		LRK54_RS11445	0.56	+2.5
2,538,173	+		LRK54_RS11445	0.56	-0.0
2,538,173	+		LRK54_RS11445	0.56	+0.5
2,538,173	+		LRK54_RS11445	0.56	-0.8
2,538,173	+		LRK54_RS11445	0.56	+0.1
2,538,173	+		LRK54_RS11445	0.56	+0.3
2,538,173	+		LRK54_RS11445	0.56	+0.1
2,538,173	+		LRK54_RS11445	0.56	+2.5
2,538,173	+		LRK54_RS11445	0.56	+1.5
2,538,173	+		LRK54_RS11445	0.56	+1.3
2,538,173	+		LRK54_RS11445	0.56	-0.7
2,538,173	+		LRK54_RS11445	0.56	-1.3
2,538,173	+		LRK54_RS11445	0.56	-0.2
2,538,173	+		LRK54_RS11445	0.56	-2.3
2,538,173	+		LRK54_RS11445	0.56	+0.7
2,538,173	+		LRK54_RS11445	0.56	+0.3
2,538,173	+		LRK54_RS11445	0.56	+1.0
2,538,173	+		LRK54_RS11445	0.56	+0.1
2,538,173	+		LRK54_RS11445	0.56	-1.8
2,538,173	+		LRK54_RS11445	0.56	-1.6
2,538,173	+		LRK54_RS11445	0.56	+0.3
2,538,173	+		LRK54_RS11445	0.56	-0.6
2,538,173	+		LRK54_RS11445	0.56	-0.0
2,538,173	+		LRK54_RS11445	0.56	-1.7
2,538,173	+		LRK54_RS11445	0.56	+0.3
2,538,173	+		LRK54_RS11445	0.56	-0.2
2,538,173	+		LRK54_RS11445	0.56	+0.0
2,538,173	+		LRK54_RS11445	0.56	+0.8
2,538,173	+		LRK54_RS11445	0.56	-0.5
2,538,173	+		LRK54_RS11445	0.56	-1.3
2,538,174	-		LRK54_RS11445	0.56	+1.5
2,538,174	-		LRK54_RS11445	0.56	+0.7
2,538,174	-		LRK54_RS11445	0.56	+0.0
2,538,174	-		LRK54_RS11445	0.56	-0.2
2,538,174	-		LRK54_RS11445	0.56	-1.0
2,538,174	-		LRK54_RS11445	0.56	-0.0
2,538,174	-		LRK54_RS11445	0.56	+0.2
2,538,174	-		LRK54_RS11445	0.56	-2.6
2,538,174	-		LRK54_RS11445	0.56	-0.9
2,538,174	-		LRK54_RS11445	0.56	-1.0
2,538,174	-		LRK54_RS11445	0.56	+1.7
2,538,174	-		LRK54_RS11445	0.56	-0.3
2,538,174	-		LRK54_RS11445	0.56	+1.1
2,538,174	-		LRK54_RS11445	0.56	-2.2
2,538,174	-		LRK54_RS11445	0.56	-0.3
2,538,174	-		LRK54_RS11445	0.56	+0.3
2,538,174	-		LRK54_RS11445	0.56	+0.6
2,538,174	-		LRK54_RS11445	0.56	-0.9
2,538,174	-		LRK54_RS11445	0.56	+1.2
2,538,174	-		LRK54_RS11445	0.56	-1.5
2,538,174	-		LRK54_RS11445	0.56	-1.5
2,538,174	-		LRK54_RS11445	0.56	-0.0
2,538,174	-		LRK54_RS11445	0.56	-1.0
2,538,174	-		LRK54_RS11445	0.56	+0.5
2,538,174	-		LRK54_RS11445	0.56	-0.3
2,538,174	-		LRK54_RS11445	0.56	-0.9
2,538,174	-		LRK54_RS11445	0.56	-1.0
2,538,174	-		LRK54_RS11445	0.56	+0.4
2,538,174	-		LRK54_RS11445	0.56	-0.7
2,538,174	-		LRK54_RS11445	0.56	-0.1
2,538,174	-		LRK54_RS11445	0.56	-0.5
2,538,174	-		LRK54_RS11445	0.56	+0.4
2,538,174	-		LRK54_RS11445	0.56	+0.0
2,538,174	-		LRK54_RS11445	0.56	-0.6
2,538,174	-		LRK54_RS11445	0.56	-0.1
2,538,174	-		LRK54_RS11445	0.56	+2.0
2,538,174	-		LRK54_RS11445	0.56	-0.8
2,538,174	-		LRK54_RS11445	0.56	-0.0
2,538,174	-		LRK54_RS11445	0.56	+1.5
2,538,174	-		LRK54_RS11445	0.56	+1.1
2,538,174	-		LRK54_RS11445	0.56	-1.0
2,538,174	-		LRK54_RS11445	0.56	+1.5
2,538,174	-		LRK54_RS11445	0.56	-0.3
2,538,174	-		LRK54_RS11445	0.56	-0.5
2,538,174	-		LRK54_RS11445	0.56	-0.1
2,538,179	+		LRK54_RS11445	0.57	+1.7
2,538,179	+		LRK54_RS11445	0.57	+1.5
2,538,179	+		LRK54_RS11445	0.57	-0.9
2,538,179	+		LRK54_RS11445	0.57	-0.5
2,538,179	+		LRK54_RS11445	0.57	+0.5
2,538,179	+		LRK54_RS11445	0.57	-1.0
2,538,179	+		LRK54_RS11445	0.57	+0.7
2,538,179	+		LRK54_RS11445	0.57	-0.6
2,538,179	+		LRK54_RS11445	0.57	-0.0
2,538,179	+		LRK54_RS11445	0.57	-1.0
2,538,179	+		LRK54_RS11445	0.57	-0.4
2,538,179	+		LRK54_RS11445	0.57	+0.5
2,538,179	+		LRK54_RS11445	0.57	-0.4
2,538,179	+		LRK54_RS11445	0.57	+0.7
2,538,179	+		LRK54_RS11445	0.57	+1.0
2,538,179	+		LRK54_RS11445	0.57	-0.3
2,538,179	+		LRK54_RS11445	0.57	+0.5
2,538,179	+		LRK54_RS11445	0.57	-0.3
2,538,180	-		LRK54_RS11445	0.57	+0.2
2,538,180	-		LRK54_RS11445	0.57	-0.5
2,538,180	-		LRK54_RS11445	0.57	+0.5
2,538,180	-		LRK54_RS11445	0.57	-0.3
2,538,180	-		LRK54_RS11445	0.57	-1.0
2,538,180	-		LRK54_RS11445	0.57	+0.4
2,538,180	-		LRK54_RS11445	0.57	-1.5
2,538,180	-		LRK54_RS11445	0.57	-0.1
2,538,180	-		LRK54_RS11445	0.57	-1.5
2,538,180	-		LRK54_RS11445	0.57	+0.1
2,538,180	-		LRK54_RS11445	0.57	+0.3
2,538,180	-		LRK54_RS11445	0.57	+0.1
2,538,180	-		LRK54_RS11445	0.57	-1.2
2,538,180	-		LRK54_RS11445	0.57	-0.1
2,538,180	-		LRK54_RS11445	0.57	-1.1
2,538,180	-		LRK54_RS11445	0.57	-0.8
2,538,180	-		LRK54_RS11445	0.57	-0.3
2,538,180	-		LRK54_RS11445	0.57	+0.1
2,538,180	-		LRK54_RS11445	0.57	+0.7
2,538,180	-		LRK54_RS11445	0.57	-0.7
2,538,180	-		LRK54_RS11445	0.57	-1.1
2,538,180	-		LRK54_RS11445	0.57	-0.9
2,538,180	-		LRK54_RS11445	0.57	+1.4
2,538,180	-		LRK54_RS11445	0.57	+1.7
2,538,180	-		LRK54_RS11445	0.57	-1.5
2,538,180	-		LRK54_RS11445	0.57	-0.3
2,538,180	-		LRK54_RS11445	0.57	-1.4
2,538,180	-		LRK54_RS11445	0.57	+1.0
2,538,180	-		LRK54_RS11445	0.57	-0.3
2,538,180	-		LRK54_RS11445	0.57	+0.5
2,538,180	-		LRK54_RS11445	0.57	-0.2
2,538,180	-		LRK54_RS11445	0.57	+0.9
2,538,180	-		LRK54_RS11445	0.57	-0.4
2,538,203	+		LRK54_RS11445	0.59	-1.9
2,538,203	+		LRK54_RS11445	0.59	+1.5
2,538,203	+		LRK54_RS11445	0.59	-1.4
2,538,203	+		LRK54_RS11445	0.59	-1.1
2,538,203	+		LRK54_RS11445	0.59	-2.0
2,538,203	-		LRK54_RS11445	0.59	-1.3
2,538,204	-		LRK54_RS11445	0.59	+0.5
2,538,204	-		LRK54_RS11445	0.59	-1.0
2,538,204	-		LRK54_RS11445	0.59	+1.5
2,538,204	-		LRK54_RS11445	0.59	+2.0
2,538,204	-		LRK54_RS11445	0.59	-1.5
2,538,290	+		LRK54_RS11445	0.67	-0.8
2,538,290	+		LRK54_RS11445	0.67	-0.1
2,538,290	+		LRK54_RS11445	0.67	-1.2
2,538,290	+		LRK54_RS11445	0.67	+0.5
2,538,290	+		LRK54_RS11445	0.67	+0.2
2,538,290	+		LRK54_RS11445	0.67	-0.0
2,538,291	-		LRK54_RS11445	0.67	-0.6
2,538,291	-		LRK54_RS11445	0.67	+0.6
2,538,291	-		LRK54_RS11445	0.67	+1.5
2,538,374	+		LRK54_RS11445	0.74	+0.1
2,538,374	+		LRK54_RS11445	0.74	+0.2
2,538,374	+		LRK54_RS11445	0.74	+0.2
2,538,375	-		LRK54_RS11445	0.74	-0.5
2,538,375	-		LRK54_RS11445	0.74	-2.3
2,538,375	-		LRK54_RS11445	0.74	+0.5
2,538,375	-		LRK54_RS11445	0.74	+0.4
2,538,375	-		LRK54_RS11445	0.74	+1.1
2,538,375	-		LRK54_RS11445	0.74	+1.1
2,538,375	-		LRK54_RS11445	0.74	+0.1
2,538,375	-		LRK54_RS11445	0.74	+0.3
2,538,375	-		LRK54_RS11445	0.74	-0.5
2,538,375	-		LRK54_RS11445	0.74	-0.2
2,538,422	+		LRK54_RS11445	0.78	+0.7
2,538,440	+		LRK54_RS11445	0.80	-1.6
2,538,440	+		LRK54_RS11445	0.80	-0.0
2,538,441	-		LRK54_RS11445	0.80	-0.6
2,538,441	-		LRK54_RS11445	0.80	-0.4
2,538,441	-		LRK54_RS11445	0.80	+0.3
2,538,441	-		LRK54_RS11445	0.80	-0.2
2,538,441	-		LRK54_RS11445	0.80	-1.2
2,538,441	-		LRK54_RS11445	0.80	-0.0
2,538,441	-		LRK54_RS11445	0.80	-0.0
2,538,441	-		LRK54_RS11445	0.80	+0.1
2,538,527	+		LRK54_RS11445	0.88	+1.0
2,538,527	+		LRK54_RS11445	0.88	+0.1
2,538,527	+		LRK54_RS11445	0.88	-0.8
2,538,527	+		LRK54_RS11445	0.88	-0.7
2,538,528	-		LRK54_RS11445	0.88	-1.3
2,538,528	-		LRK54_RS11445	0.88	-0.7
2,538,528	-		LRK54_RS11445	0.88	-0.0
2,538,617	+				-0.3
2,538,617	+				-0.7
2,538,617	+				-0.5
2,538,617	+				-0.0
2,538,617	+				+1.5
2,538,617	+				-0.7
2,538,617	+				-0.6
2,538,617	+				+2.1
2,538,617	+				-0.6
2,538,617	+				+0.6
2,538,617	+				-0.5
2,538,617	+				-0.2
2,538,617	+				+1.1
2,538,617	+				-0.6
2,538,617	+				-1.8
2,538,617	+				-0.3
2,538,617	+				+0.1
2,538,618	-				-0.6
2,538,618	-				+0.0
2,538,618	-				-1.9
2,538,618	-				-0.0
2,538,618	-				+0.7
2,538,618	-				+0.1
2,538,618	-				+1.5
2,538,618	-				-2.3
2,538,618	-				+0.5
2,538,618	-				-0.7
2,538,618	-				+0.8
2,538,618	-				+0.3
2,538,618	-				+0.1
2,538,618	-				+1.7
2,538,618	-				-0.0
2,538,618	-				-1.0
2,538,618	-				-0.1
2,538,620	+				-1.6
2,538,620	+				+1.0
2,538,620	+				-0.9
2,538,620	+				+0.5
2,538,620	+				-0.2
2,538,620	+				-1.0
2,538,620	+				-2.9
2,538,620	+				-0.5
2,538,620	+				+0.8
2,538,621	-				+0.3
2,538,621	-				+1.5
2,538,621	-				+0.7
2,538,621	-				+0.6
2,538,674	+				-0.3
2,538,674	+				-2.7
2,538,674	+				+0.4
2,538,675	-				+0.2
2,538,675	-				+0.2
2,538,675	-				-0.4
2,538,878	+		LRK54_RS11450	0.26	-1.2
2,538,878	+		LRK54_RS11450	0.26	-0.4
2,538,879	-		LRK54_RS11450	0.26	+1.5
2,538,937	+		LRK54_RS11450	0.34	+0.1
2,538,937	+		LRK54_RS11450	0.34	-1.0
2,538,937	+		LRK54_RS11450	0.34	+1.5
2,538,937	+		LRK54_RS11450	0.34	-0.0
2,538,937	+		LRK54_RS11450	0.34	-1.6
2,538,937	+		LRK54_RS11450	0.34	-1.4
2,538,937	+		LRK54_RS11450	0.34	+0.5
2,538,937	+		LRK54_RS11450	0.34	+1.5
2,538,937	+		LRK54_RS11450	0.34	+0.2
2,538,937	+		LRK54_RS11450	0.34	-0.8
2,538,938	-		LRK54_RS11450	0.34	+0.3
2,538,938	-		LRK54_RS11450	0.34	-0.2
2,538,938	-		LRK54_RS11450	0.34	+0.5
2,538,938	-		LRK54_RS11450	0.34	+0.5
2,538,938	-		LRK54_RS11450	0.34	+0.5
2,538,938	-		LRK54_RS11450	0.34	-1.6
2,538,938	-		LRK54_RS11450	0.34	-0.0
2,538,938	-		LRK54_RS11450	0.34	+2.5
2,538,938	-		LRK54_RS11450	0.34	-0.1
2,538,938	-		LRK54_RS11450	0.34	+2.5
2,538,938	-		LRK54_RS11450	0.34	+1.1
2,538,938	-		LRK54_RS11450	0.34	-2.5
2,538,977	+		LRK54_RS11450	0.39	-1.9
2,538,977	+		LRK54_RS11450	0.39	-0.5
2,538,977	+		LRK54_RS11450	0.39	+0.2
2,538,977	+		LRK54_RS11450	0.39	+0.8
2,538,977	+		LRK54_RS11450	0.39	-2.3
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