Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04395

Experiment: LB plate, 1:1 coculture with Enterobacter_TBS_079

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04393 and MPMX20_04394 are separated by 54 nucleotidesMPMX20_04394 and MPMX20_04395 are separated by 283 nucleotidesMPMX20_04395 and MPMX20_04396 are separated by 86 nucleotidesMPMX20_04396 and MPMX20_04397 overlap by 35 nucleotides MPMX20_04393: MPMX20_04393 - Low-affinity inorganic phosphate transporter 1, at 4,583,748 to 4,585,247 _04393 MPMX20_04394: MPMX20_04394 - Universal stress protein B, at 4,585,302 to 4,585,637 _04394 MPMX20_04395: MPMX20_04395 - Universal stress protein A, at 4,585,921 to 4,586,358 _04395 MPMX20_04396: MPMX20_04396 - Ribosomal RNA small subunit methyltransferase J, at 4,586,445 to 4,587,248 _04396 MPMX20_04397: MPMX20_04397 - Oligopeptidase A, at 4,587,214 to 4,589,256 _04397 Position (kb) 4585 4586 4587Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4584.952 kb on + strand, within MPMX20_04393at 4585.003 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.021 kb on - strand, within MPMX20_04393at 4585.021 kb on - strand, within MPMX20_04393at 4585.028 kb on + strand, within MPMX20_04393at 4585.048 kb on - strand, within MPMX20_04393at 4585.049 kb on - strand, within MPMX20_04393at 4585.087 kb on + strand, within MPMX20_04393at 4585.105 kb on - strandat 4585.322 kb on - strandat 4585.332 kb on + strandat 4585.335 kb on - strandat 4585.340 kb on - strand, within MPMX20_04394at 4585.345 kb on - strand, within MPMX20_04394at 4585.350 kb on - strand, within MPMX20_04394at 4585.359 kb on + strand, within MPMX20_04394at 4585.367 kb on - strand, within MPMX20_04394at 4585.423 kb on + strand, within MPMX20_04394at 4585.431 kb on - strand, within MPMX20_04394at 4585.440 kb on + strand, within MPMX20_04394at 4585.448 kb on - strand, within MPMX20_04394at 4585.475 kb on + strand, within MPMX20_04394at 4585.494 kb on - strand, within MPMX20_04394at 4585.504 kb on + strand, within MPMX20_04394at 4585.547 kb on - strand, within MPMX20_04394at 4585.547 kb on - strand, within MPMX20_04394at 4585.551 kb on - strand, within MPMX20_04394at 4585.658 kb on - strandat 4585.671 kb on + strandat 4585.671 kb on + strandat 4585.679 kb on - strandat 4585.687 kb on + strandat 4585.687 kb on + strandat 4585.687 kb on + strandat 4585.689 kb on + strandat 4585.697 kb on - strandat 4585.697 kb on - strandat 4585.774 kb on + strandat 4585.774 kb on + strandat 4585.782 kb on - strandat 4585.782 kb on - strandat 4585.782 kb on - strandat 4585.806 kb on + strandat 4585.806 kb on + strandat 4585.806 kb on + strandat 4585.830 kb on - strandat 4585.864 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.975 kb on - strand, within MPMX20_04395at 4585.975 kb on - strand, within MPMX20_04395at 4585.975 kb on - strand, within MPMX20_04395at 4586.004 kb on + strand, within MPMX20_04395at 4586.004 kb on + strand, within MPMX20_04395at 4586.055 kb on + strand, within MPMX20_04395at 4586.055 kb on + strand, within MPMX20_04395at 4586.060 kb on + strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.073 kb on - strand, within MPMX20_04395at 4586.078 kb on - strand, within MPMX20_04395at 4586.082 kb on + strand, within MPMX20_04395at 4586.113 kb on - strand, within MPMX20_04395at 4586.121 kb on - strand, within MPMX20_04395at 4586.127 kb on - strand, within MPMX20_04395at 4586.128 kb on - strand, within MPMX20_04395at 4586.170 kb on + strand, within MPMX20_04395at 4586.193 kb on + strand, within MPMX20_04395at 4586.193 kb on + strand, within MPMX20_04395at 4586.207 kb on - strand, within MPMX20_04395at 4586.246 kb on - strand, within MPMX20_04395at 4586.276 kb on - strand, within MPMX20_04395at 4586.298 kb on + strand, within MPMX20_04395at 4586.298 kb on + strand, within MPMX20_04395at 4586.298 kb on + strand, within MPMX20_04395at 4586.298 kb on + strand, within MPMX20_04395at 4586.298 kb on + strand, within MPMX20_04395at 4586.306 kb on - strand, within MPMX20_04395at 4586.314 kb on - strand, within MPMX20_04395at 4586.316 kb on - strandat 4586.327 kb on + strandat 4586.329 kb on + strandat 4586.337 kb on + strandat 4586.408 kb on - strandat 4586.443 kb on + strandat 4586.443 kb on + strandat 4586.450 kb on - strandat 4586.451 kb on - strandat 4586.553 kb on + strand, within MPMX20_04396at 4586.697 kb on + strand, within MPMX20_04396at 4586.698 kb on + strand, within MPMX20_04396at 4586.728 kb on - strand, within MPMX20_04396at 4586.738 kb on - strand, within MPMX20_04396at 4586.744 kb on + strand, within MPMX20_04396at 4586.878 kb on - strand, within MPMX20_04396at 4586.878 kb on - strand, within MPMX20_04396at 4586.886 kb on + strand, within MPMX20_04396at 4586.915 kb on - strand, within MPMX20_04396at 4587.137 kb on - strand, within MPMX20_04396at 4587.137 kb on - strand, within MPMX20_04396at 4587.260 kb on - strandat 4587.275 kb on + strandat 4587.275 kb on + strandat 4587.293 kb on - strandat 4587.297 kb on + strandat 4587.305 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB plate, 1:1 coculture with Enterobacter_TBS_079
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4,584,952 + MPMX20_04393 0.80 +0.1
4,585,003 + MPMX20_04393 0.84 +2.4
4,585,013 + MPMX20_04393 0.84 -1.5
4,585,013 + MPMX20_04393 0.84 -1.2
4,585,013 + MPMX20_04393 0.84 -0.4
4,585,013 + MPMX20_04393 0.84 -2.5
4,585,013 + MPMX20_04393 0.84 +0.1
4,585,013 + MPMX20_04393 0.84 -0.2
4,585,021 - MPMX20_04393 0.85 -0.9
4,585,021 - MPMX20_04393 0.85 +0.2
4,585,028 + MPMX20_04393 0.85 -2.2
4,585,048 - MPMX20_04393 0.87 -1.4
4,585,049 - MPMX20_04393 0.87 -1.8
4,585,087 + MPMX20_04393 0.89 -0.6
4,585,105 - -1.1
4,585,322 - -1.9
4,585,332 + +0.0
4,585,335 - -1.4
4,585,340 - MPMX20_04394 0.11 -1.6
4,585,345 - MPMX20_04394 0.13 +0.4
4,585,350 - MPMX20_04394 0.14 +0.1
4,585,359 + MPMX20_04394 0.17 +0.4
4,585,367 - MPMX20_04394 0.19 +0.7
4,585,423 + MPMX20_04394 0.36 +2.4
4,585,431 - MPMX20_04394 0.38 +0.1
4,585,440 + MPMX20_04394 0.41 -0.8
4,585,448 - MPMX20_04394 0.43 -0.0
4,585,475 + MPMX20_04394 0.51 -0.2
4,585,494 - MPMX20_04394 0.57 -0.4
4,585,504 + MPMX20_04394 0.60 -0.4
4,585,547 - MPMX20_04394 0.73 -0.2
4,585,547 - MPMX20_04394 0.73 +0.1
4,585,551 - MPMX20_04394 0.74 -1.1
4,585,658 - -0.6
4,585,671 + -2.0
4,585,671 + +0.2
4,585,679 - +1.0
4,585,687 + +1.9
4,585,687 + -2.4
4,585,687 + -0.1
4,585,689 + +0.1
4,585,697 - +0.2
4,585,697 - -0.9
4,585,774 + +0.8
4,585,774 + -2.2
4,585,782 - -1.7
4,585,782 - -0.6
4,585,782 - -0.6
4,585,806 + -1.4
4,585,806 + -1.2
4,585,806 + +3.7
4,585,830 - +0.1
4,585,864 + -3.1
4,585,911 + +1.8
4,585,911 + -2.7
4,585,911 + +0.4
4,585,911 + -0.2
4,585,911 + -3.4
4,585,911 + -2.7
4,585,919 - -0.9
4,585,919 - -2.6
4,585,919 - -1.0
4,585,919 - -0.7
4,585,919 - -3.0
4,585,919 - -0.7
4,585,975 - MPMX20_04395 0.12 -1.4
4,585,975 - MPMX20_04395 0.12 +3.5
4,585,975 - MPMX20_04395 0.12 -1.3
4,586,004 + MPMX20_04395 0.19 -0.9
4,586,004 + MPMX20_04395 0.19 -1.1
4,586,055 + MPMX20_04395 0.31 -1.1
4,586,055 + MPMX20_04395 0.31 -3.9
4,586,060 + MPMX20_04395 0.32 -1.9
4,586,063 - MPMX20_04395 0.32 -0.6
4,586,063 - MPMX20_04395 0.32 -1.7
4,586,063 - MPMX20_04395 0.32 -0.3
4,586,073 - MPMX20_04395 0.35 -2.3
4,586,078 - MPMX20_04395 0.36 +0.4
4,586,082 + MPMX20_04395 0.37 -0.6
4,586,113 - MPMX20_04395 0.44 +0.5
4,586,121 - MPMX20_04395 0.46 -1.3
4,586,127 - MPMX20_04395 0.47 -3.1
4,586,128 - MPMX20_04395 0.47 -0.5
4,586,170 + MPMX20_04395 0.57 +0.0
4,586,193 + MPMX20_04395 0.62 +0.2
4,586,193 + MPMX20_04395 0.62 -1.5
4,586,207 - MPMX20_04395 0.65 -0.9
4,586,246 - MPMX20_04395 0.74 -2.6
4,586,276 - MPMX20_04395 0.81 +1.8
4,586,298 + MPMX20_04395 0.86 +1.1
4,586,298 + MPMX20_04395 0.86 -1.4
4,586,298 + MPMX20_04395 0.86 -1.9
4,586,298 + MPMX20_04395 0.86 -0.2
4,586,298 + MPMX20_04395 0.86 -1.6
4,586,306 - MPMX20_04395 0.88 -3.4
4,586,314 - MPMX20_04395 0.90 -1.1
4,586,316 - -0.8
4,586,327 + -2.4
4,586,329 + -1.7
4,586,337 + +0.4
4,586,408 - -0.4
4,586,443 + +2.3
4,586,443 + +0.1
4,586,450 - +0.0
4,586,451 - -0.8
4,586,553 + MPMX20_04396 0.13 -0.0
4,586,697 + MPMX20_04396 0.31 -0.6
4,586,698 + MPMX20_04396 0.31 -0.1
4,586,728 - MPMX20_04396 0.35 -0.6
4,586,738 - MPMX20_04396 0.36 +0.1
4,586,744 + MPMX20_04396 0.37 -2.5
4,586,878 - MPMX20_04396 0.54 -0.1
4,586,878 - MPMX20_04396 0.54 -1.1
4,586,886 + MPMX20_04396 0.55 -2.2
4,586,915 - MPMX20_04396 0.58 +0.6
4,587,137 - MPMX20_04396 0.86 +0.1
4,587,137 - MPMX20_04396 0.86 +0.5
4,587,260 - -0.4
4,587,275 + +2.6
4,587,275 + +1.4
4,587,293 - -0.8
4,587,297 + -1.2
4,587,305 - +0.7

Or see this region's nucleotide sequence