Experiment: pyrophosphate 1 mM phosphorus source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1058_RS06560 and HMPREF1058_RS06555 are separated by 110 nucleotides HMPREF1058_RS06555 and HMPREF1058_RS06550 overlap by 8 nucleotides HMPREF1058_RS06550 and HMPREF1058_RS06545 are separated by 359 nucleotides
HMPREF1058_RS06560: HMPREF1058_RS06560 - carboxypeptidase-like regulatory domain-containing protein, at 449,037 to 451,610
_RS06560
HMPREF1058_RS06555: HMPREF1058_RS06555 - nucleotidyltransferase domain-containing protein, at 451,721 to 452,014
_RS06555
HMPREF1058_RS06550: HMPREF1058_RS06550 - DUF86 domain-containing protein, at 452,007 to 452,381
_RS06550
HMPREF1058_RS06545: HMPREF1058_RS06545 - transcriptional regulator, at 452,741 to 453,838
_RS06545
Position (kb) 451
452
453 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 450.757 kb on - strand, within HMPREF1058_RS06560 at 450.757 kb on - strand, within HMPREF1058_RS06560 at 450.863 kb on + strand, within HMPREF1058_RS06560 at 451.005 kb on - strand, within HMPREF1058_RS06560 at 451.050 kb on + strand, within HMPREF1058_RS06560 at 451.057 kb on - strand, within HMPREF1058_RS06560 at 451.110 kb on - strand, within HMPREF1058_RS06560 at 451.194 kb on + strand, within HMPREF1058_RS06560 at 451.194 kb on + strand, within HMPREF1058_RS06560 at 451.195 kb on - strand, within HMPREF1058_RS06560 at 451.229 kb on + strand, within HMPREF1058_RS06560 at 451.229 kb on + strand, within HMPREF1058_RS06560 at 451.230 kb on - strand, within HMPREF1058_RS06560 at 451.230 kb on - strand, within HMPREF1058_RS06560 at 451.271 kb on - strand, within HMPREF1058_RS06560 at 451.517 kb on - strand at 451.525 kb on + strand at 451.526 kb on - strand at 451.530 kb on + strand at 451.530 kb on + strand at 451.656 kb on + strand at 451.726 kb on - strand at 451.742 kb on - strand at 451.874 kb on - strand, within HMPREF1058_RS06555 at 451.874 kb on - strand, within HMPREF1058_RS06555 at 451.892 kb on - strand, within HMPREF1058_RS06555 at 452.006 kb on + strand at 452.006 kb on + strand at 452.006 kb on + strand at 452.007 kb on - strand at 452.007 kb on - strand at 452.010 kb on + strand at 452.067 kb on + strand, within HMPREF1058_RS06550 at 452.074 kb on + strand, within HMPREF1058_RS06550 at 452.074 kb on + strand, within HMPREF1058_RS06550 at 452.074 kb on + strand, within HMPREF1058_RS06550 at 452.075 kb on - strand, within HMPREF1058_RS06550 at 452.075 kb on - strand, within HMPREF1058_RS06550 at 452.075 kb on - strand, within HMPREF1058_RS06550 at 452.173 kb on + strand, within HMPREF1058_RS06550 at 452.204 kb on - strand, within HMPREF1058_RS06550 at 452.226 kb on + strand, within HMPREF1058_RS06550 at 452.226 kb on + strand, within HMPREF1058_RS06550 at 452.228 kb on + strand, within HMPREF1058_RS06550 at 452.250 kb on - strand, within HMPREF1058_RS06550 at 452.250 kb on - strand, within HMPREF1058_RS06550 at 452.253 kb on + strand, within HMPREF1058_RS06550 at 452.254 kb on - strand, within HMPREF1058_RS06550 at 452.254 kb on - strand, within HMPREF1058_RS06550 at 452.258 kb on + strand, within HMPREF1058_RS06550 at 452.258 kb on + strand, within HMPREF1058_RS06550 at 452.288 kb on + strand, within HMPREF1058_RS06550 at 452.288 kb on + strand, within HMPREF1058_RS06550 at 452.289 kb on - strand, within HMPREF1058_RS06550 at 452.306 kb on - strand, within HMPREF1058_RS06550 at 452.308 kb on + strand, within HMPREF1058_RS06550 at 452.312 kb on + strand, within HMPREF1058_RS06550 at 452.312 kb on + strand, within HMPREF1058_RS06550 at 452.313 kb on - strand, within HMPREF1058_RS06550 at 452.319 kb on - strand, within HMPREF1058_RS06550 at 452.335 kb on + strand, within HMPREF1058_RS06550 at 452.336 kb on - strand, within HMPREF1058_RS06550 at 452.369 kb on + strand at 452.413 kb on + strand at 452.475 kb on + strand at 452.486 kb on + strand at 452.518 kb on + strand at 452.532 kb on - strand at 452.655 kb on - strand at 452.818 kb on + strand at 452.837 kb on + strand at 452.965 kb on + strand, within HMPREF1058_RS06545 at 452.967 kb on + strand, within HMPREF1058_RS06545 at 453.011 kb on + strand, within HMPREF1058_RS06545 at 453.011 kb on + strand, within HMPREF1058_RS06545 at 453.012 kb on - strand, within HMPREF1058_RS06545
Per-strain Table
Position Strand Gene LocusTag Fraction pyrophosphate 1 mM phosphorus source remove 450,757 - HMPREF1058_RS06560 0.67 +0.4 450,757 - HMPREF1058_RS06560 0.67 -1.5 450,863 + HMPREF1058_RS06560 0.71 -0.1 451,005 - HMPREF1058_RS06560 0.76 +1.9 451,050 + HMPREF1058_RS06560 0.78 -0.2 451,057 - HMPREF1058_RS06560 0.78 -0.1 451,110 - HMPREF1058_RS06560 0.81 -0.4 451,194 + HMPREF1058_RS06560 0.84 -1.0 451,194 + HMPREF1058_RS06560 0.84 -1.9 451,195 - HMPREF1058_RS06560 0.84 -0.8 451,229 + HMPREF1058_RS06560 0.85 -1.5 451,229 + HMPREF1058_RS06560 0.85 +0.1 451,230 - HMPREF1058_RS06560 0.85 +0.6 451,230 - HMPREF1058_RS06560 0.85 +0.1 451,271 - HMPREF1058_RS06560 0.87 +0.4 451,517 - -0.5 451,525 + -1.4 451,526 - -1.1 451,530 + +1.0 451,530 + -1.1 451,656 + +1.7 451,726 - -1.9 451,742 - +0.1 451,874 - HMPREF1058_RS06555 0.52 -1.0 451,874 - HMPREF1058_RS06555 0.52 -0.9 451,892 - HMPREF1058_RS06555 0.58 -1.1 452,006 + -0.0 452,006 + -1.3 452,006 + -0.2 452,007 - -0.6 452,007 - +0.1 452,010 + -1.8 452,067 + HMPREF1058_RS06550 0.16 -0.0 452,074 + HMPREF1058_RS06550 0.18 -0.2 452,074 + HMPREF1058_RS06550 0.18 -1.0 452,074 + HMPREF1058_RS06550 0.18 -2.0 452,075 - HMPREF1058_RS06550 0.18 +0.4 452,075 - HMPREF1058_RS06550 0.18 -3.1 452,075 - HMPREF1058_RS06550 0.18 -0.6 452,173 + HMPREF1058_RS06550 0.44 +0.6 452,204 - HMPREF1058_RS06550 0.53 +2.2 452,226 + HMPREF1058_RS06550 0.58 +0.3 452,226 + HMPREF1058_RS06550 0.58 -2.2 452,228 + HMPREF1058_RS06550 0.59 +1.0 452,250 - HMPREF1058_RS06550 0.65 +0.3 452,250 - HMPREF1058_RS06550 0.65 -1.1 452,253 + HMPREF1058_RS06550 0.66 +0.9 452,254 - HMPREF1058_RS06550 0.66 -0.6 452,254 - HMPREF1058_RS06550 0.66 -0.1 452,258 + HMPREF1058_RS06550 0.67 +0.1 452,258 + HMPREF1058_RS06550 0.67 +0.4 452,288 + HMPREF1058_RS06550 0.75 -0.4 452,288 + HMPREF1058_RS06550 0.75 -1.3 452,289 - HMPREF1058_RS06550 0.75 -1.9 452,306 - HMPREF1058_RS06550 0.80 -1.6 452,308 + HMPREF1058_RS06550 0.80 -0.8 452,312 + HMPREF1058_RS06550 0.81 -0.8 452,312 + HMPREF1058_RS06550 0.81 -0.9 452,313 - HMPREF1058_RS06550 0.82 -0.1 452,319 - HMPREF1058_RS06550 0.83 -0.8 452,335 + HMPREF1058_RS06550 0.87 -0.4 452,336 - HMPREF1058_RS06550 0.88 +0.2 452,369 + -0.5 452,413 + -1.2 452,475 + -0.7 452,486 + -1.4 452,518 + +0.1 452,532 - -2.4 452,655 - -1.1 452,818 + -0.5 452,837 + -0.6 452,965 + HMPREF1058_RS06545 0.20 -1.3 452,967 + HMPREF1058_RS06545 0.21 +0.1 453,011 + HMPREF1058_RS06545 0.25 +0.0 453,011 + HMPREF1058_RS06545 0.25 +0.5 453,012 - HMPREF1058_RS06545 0.25 -0.4
Or see this region's nucleotide sequence