Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS21480

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
656	+		HMPREF1058_RS21480	0.24	-1.3
772	-		HMPREF1058_RS21480	0.76	-1.6
922	-				-1.0
979	-				+0.2
983	+				-0.3
983	+				-0.1
1,005	+				-0.7
1,005	+				-1.0
1,006	-				-0.7
1,006	-				+1.9
1,020	+				-0.3
1,023	+				-1.3
1,024	-				+1.0
1,029	-				+0.9
1,043	+				-0.9
1,044	-				+0.1
1,093	+				-0.0
1,105	+				-1.7
1,105	+				+0.2
1,183	-				+0.2
1,231	+				-0.5
1,232	-				+1.7
1,308	+				-0.5
1,333	+				+0.7
1,334	-				+0.3
1,334	-				+1.5
1,356	+				+3.4
1,357	-				-2.1
1,375	+				-1.5
1,380	+				-1.8
1,380	+				-0.5
1,380	+				+0.1
1,608	+				-1.8
1,657	+				+0.7
1,658	-				-0.7
1,664	+				-0.5
1,696	+				+1.3
1,697	-				-2.0
1,708	+				-0.7
1,708	+				-0.5
1,709	-				-0.7
1,709	-				+0.8
1,719	+				+0.8
1,719	+				-0.1
1,747	-				-0.2
1,749	+		HMPREF1058_RS06105	0.10	-0.2
1,758	+		HMPREF1058_RS06105	0.11	-1.0