Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS13350

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
1,524,218	+				+0.7
1,524,265	-				+1.9
1,524,481	+		HMPREF1058_RS13350	0.18	-2.0
1,524,481	+		HMPREF1058_RS13350	0.18	-0.1
1,524,481	+		HMPREF1058_RS13350	0.18	-0.6
1,524,482	-		HMPREF1058_RS13350	0.19	-0.6
1,524,539	+		HMPREF1058_RS13350	0.23	-2.0
1,524,543	+		HMPREF1058_RS13350	0.23	-1.8
1,524,583	-		HMPREF1058_RS13350	0.26	+1.3
1,524,623	-		HMPREF1058_RS13350	0.29	-1.1
1,524,624	+		HMPREF1058_RS13350	0.29	+0.9
1,524,627	+		HMPREF1058_RS13350	0.29	-0.1
1,524,693	+		HMPREF1058_RS13350	0.34	+0.9
1,524,694	-		HMPREF1058_RS13350	0.34	+1.3
1,524,694	-		HMPREF1058_RS13350	0.34	-0.2
1,524,758	-		HMPREF1058_RS13350	0.39	-1.6
1,524,777	+		HMPREF1058_RS13350	0.41	-1.8
1,524,826	+		HMPREF1058_RS13350	0.44	-1.9
1,524,841	+		HMPREF1058_RS13350	0.45	-0.3
1,524,870	-		HMPREF1058_RS13350	0.48	-3.1
1,524,918	+		HMPREF1058_RS13350	0.51	+0.0
1,524,971	+		HMPREF1058_RS13350	0.55	+1.9
1,524,971	+		HMPREF1058_RS13350	0.55	+0.0
1,524,972	-		HMPREF1058_RS13350	0.55	-2.7
1,524,984	-		HMPREF1058_RS13350	0.56	-1.6
1,525,056	+		HMPREF1058_RS13350	0.61	-0.7
1,525,063	+		HMPREF1058_RS13350	0.62	-0.2
1,525,231	+		HMPREF1058_RS13350	0.74	-1.1
1,525,298	-		HMPREF1058_RS13350	0.79	-1.4
1,525,298	-		HMPREF1058_RS13350	0.79	-1.3
1,525,298	-		HMPREF1058_RS13350	0.79	-1.1
1,525,336	-				+1.9
1,525,490	-				-0.1
1,525,490	-				+2.9
1,525,524	+				-0.9
1,525,525	-				-0.5
1,525,537	+				-1.5
1,525,538	-				-0.7
1,525,578	-				+0.4
1,525,643	+				-1.0
1,525,644	-				-1.9
1,525,644	-				+1.4
1,525,666	+				-3.0
1,525,666	+				-0.6
1,525,680	+				-0.9
1,525,680	+				-2.0
1,525,726	-		HMPREF1058_RS13345	0.11	-1.1
1,525,821	-		HMPREF1058_RS13345	0.17	-1.4
1,525,845	-		HMPREF1058_RS13345	0.19	-0.6
1,525,854	+		HMPREF1058_RS13345	0.19	-0.7
1,525,855	-		HMPREF1058_RS13345	0.19	-1.7
1,525,929	+		HMPREF1058_RS13345	0.24	-0.7
1,525,930	-		HMPREF1058_RS13345	0.25	-0.5
1,525,932	-		HMPREF1058_RS13345	0.25	-0.4
1,525,932	-		HMPREF1058_RS13345	0.25	+1.0
1,525,968	+		HMPREF1058_RS13345	0.27	-0.2
1,526,051	+		HMPREF1058_RS13345	0.33	+0.1
1,526,091	-		HMPREF1058_RS13345	0.36	-0.6
1,526,130	+		HMPREF1058_RS13345	0.38	+0.2
1,526,135	-		HMPREF1058_RS13345	0.39	-1.1
1,526,160	+		HMPREF1058_RS13345	0.40	+0.1
1,526,161	-		HMPREF1058_RS13345	0.40	-0.1
1,526,201	+		HMPREF1058_RS13345	0.43	-0.1
1,526,254	-		HMPREF1058_RS13345	0.47	+1.3
1,526,282	+		HMPREF1058_RS13345	0.49	-0.1
1,526,283	-		HMPREF1058_RS13345	0.49	-0.6
1,526,283	-		HMPREF1058_RS13345	0.49	-1.6
1,526,283	-		HMPREF1058_RS13345	0.49	-3.3
1,526,289	+		HMPREF1058_RS13345	0.49	-0.3
1,526,291	+		HMPREF1058_RS13345	0.49	-1.1
1,526,292	-		HMPREF1058_RS13345	0.49	-0.6
1,526,296	-		HMPREF1058_RS13345	0.50	-0.3
1,526,320	-		HMPREF1058_RS13345	0.51	-0.3
1,526,338	+		HMPREF1058_RS13345	0.53	+1.3
1,526,339	-		HMPREF1058_RS13345	0.53	-0.1
1,526,383	-		HMPREF1058_RS13345	0.56	-0.4
1,526,446	-		HMPREF1058_RS13345	0.60	+0.8
1,526,543	-		HMPREF1058_RS13345	0.67	-0.6