Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS04605

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
1,446	-		HMPREF1058_RS04610	0.86	+0.0
1,448	+		HMPREF1058_RS04610	0.86	+0.0
1,602	+				-0.3
1,631	+				-0.7
1,631	+				+0.7
1,631	+				+1.2
1,665	+				-0.3
1,736	-		HMPREF1058_RS21515	0.19	-0.6
1,836	+		HMPREF1058_RS21515	0.31	+0.1
1,884	+		HMPREF1058_RS21515	0.37	-0.5
1,885	-		HMPREF1058_RS21515	0.38	+0.5
1,885	-		HMPREF1058_RS21515	0.38	-0.3
1,999	+		HMPREF1058_RS21515	0.52	+0.1
2,024	-		HMPREF1058_RS21515	0.55	-0.5
2,033	+		HMPREF1058_RS21515	0.56	-1.1
2,034	-		HMPREF1058_RS21515	0.56	+0.2
2,107	+		HMPREF1058_RS21515	0.66	-1.8
2,161	+		HMPREF1058_RS21515	0.72	-1.0
2,191	-		HMPREF1058_RS21515	0.76	+0.4
2,336	-				+0.0
2,394	+				+1.6
2,529	+		HMPREF1058_RS04605	0.34	-1.1
2,703	+		HMPREF1058_RS04605	0.69	-3.0
2,762	+		HMPREF1058_RS04605	0.81	-0.4
2,815	+				-0.7
2,887	+				+0.4
2,887	+				-1.6
2,891	+				+1.4
2,932	+				-1.3
2,960	+				+0.8
3,192	+		HMPREF1058_RS04600	0.51	+0.7
3,317	+		HMPREF1058_RS04600	0.79	-0.2
3,401	+				-1.1
3,434	+				-0.0