Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS04065

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
122,395	-		HMPREF1058_RS04070	0.25	-0.3
122,415	+		HMPREF1058_RS04070	0.27	-1.4
122,533	-		HMPREF1058_RS04070	0.38	+0.4
122,533	-		HMPREF1058_RS04070	0.38	-0.5
122,579	+		HMPREF1058_RS04070	0.42	-2.7
122,613	-		HMPREF1058_RS04070	0.45	-0.8
122,654	-		HMPREF1058_RS04070	0.49	-3.5
122,667	-		HMPREF1058_RS04070	0.50	-0.5
122,800	+		HMPREF1058_RS04070	0.62	+0.4
122,939	-		HMPREF1058_RS04070	0.75	+0.0
123,175	+				-0.5
123,194	+				+1.3
123,196	+				+0.5
123,196	+				-0.5
123,196	+				+0.8
123,196	+				+0.1
123,196	+				+0.5
123,197	-				+0.9
123,284	+				-0.9
123,284	+				-1.3
123,285	-				+0.4
123,285	-				-0.1
123,289	-				-0.4
123,292	-				+2.2
123,486	+		HMPREF1058_RS04065	0.25	-0.8
123,529	+		HMPREF1058_RS04065	0.30	+0.0
124,089	+		HMPREF1058_RS04065	0.86	-0.5
124,274	+				-1.0
124,288	-				-0.7
124,909	-		HMPREF1058_RS04060	0.65	-0.7