Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS03535

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
253,507	+		HMPREF1058_RS03540	0.80	+0.5
253,626	+		HMPREF1058_RS03540	0.89	+1.2
253,783	+				-0.4
253,968	+				-0.5
254,627	+		HMPREF1058_RS03535	0.24	+0.6
254,685	-		HMPREF1058_RS03535	0.26	+1.2
255,125	+		HMPREF1058_RS03535	0.40	-0.6
256,694	+		HMPREF1058_RS03535	0.89	+0.6
256,771	+				+0.6
256,993	+				-1.3
257,184	+				+1.2
257,885	-		HMPREF1058_RS03530	0.30	-0.6