Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS02750

Experiment: FSL 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	FSL 10 mg/mL (C)
105,590	+		HMPREF1058_RS02755	0.80	-0.2
105,643	-		HMPREF1058_RS02755	0.81	-0.4
106,060	-				+1.4
106,424	-				-0.2
106,493	+				-0.3
106,493	+				-2.0
106,539	+				+0.7
106,539	+				+0.3
106,551	+				-0.8
106,552	-				-0.0
106,591	+				-0.6
106,620	+				+0.4
106,622	+				+0.2
106,721	-				+1.0
106,860	-				-0.3
106,860	-		HMPREF1058_RS02750	0.15	-1.1
107,082	-		HMPREF1058_RS02750	0.24	-0.6
107,297	+		HMPREF1058_RS02750	0.34	-1.7
107,299	+		HMPREF1058_RS02750	0.34	-2.5
107,309	-		HMPREF1058_RS02750	0.34	+3.0
107,309	-		HMPREF1058_RS02750	0.34	-0.3
107,309	-		HMPREF1058_RS02750	0.34	+0.7
107,319	-		HMPREF1058_RS02750	0.35	-1.9
107,386	+		HMPREF1058_RS02750	0.37	-0.9
107,546	-		HMPREF1058_RS02750	0.44	-0.6
107,564	-		HMPREF1058_RS02750	0.45	-0.0
107,604	-		HMPREF1058_RS02750	0.47	-0.3
108,035	-		HMPREF1058_RS02750	0.65	-0.7
108,037	+		HMPREF1058_RS02750	0.65	+2.0
108,037	+		HMPREF1058_RS02750	0.65	-0.7
108,037	+		HMPREF1058_RS02750	0.65	+0.4
108,121	+		HMPREF1058_RS02750	0.69	+0.2
108,122	-		HMPREF1058_RS02750	0.69	-0.6
108,128	-		HMPREF1058_RS02750	0.69	+1.0
108,216	-		HMPREF1058_RS02750	0.73	+1.4
108,369	-		HMPREF1058_RS02750	0.79	-0.8
108,501	-		HMPREF1058_RS02750	0.85	+0.7
108,646	-				+1.4
108,800	+				+0.4
108,806	-				+0.4
108,812	-				-1.8
108,860	+				-0.1
108,861	-				-1.0
108,866	+				-0.2