Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS03690

Experiment: Lacto-N-tetraose 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lacto-N-tetraose 10 mg/mL (C)
214,679	-		HMPREF1058_RS03690	0.24	-3.2
214,679	-		HMPREF1058_RS03690	0.24	-0.7
214,742	-		HMPREF1058_RS03690	0.53	-0.5
214,743	-		HMPREF1058_RS03690	0.53	-2.3
214,951	+				-0.1
214,962	+				-0.0
214,966	+				-0.0
214,988	-				-1.4
215,029	-				-0.8
215,039	-				+0.1
215,373	-				+1.1
215,373	-				+0.5
215,728	+				+0.5
215,729	-				+0.9
215,732	+				+0.9
215,732	+				+1.2
215,733	-				-0.7
215,733	-				-1.1
215,734	+				+0.5
215,734	-				-2.2
215,839	-				-1.2