Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06450

Experiment: Glucose (C) and nitrate (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with TAPS
1,441,326	-				-0.3
1,441,936	+				-1.2
1,441,936	+				+0.5
1,441,936	+				-0.0
1,441,937	-				-1.7
1,441,943	-				-0.3
1,441,952	+				-0.5
1,441,952	+				+0.7
1,441,952	+				-1.3
1,441,952	+				-1.6
1,441,952	+				+0.4
1,441,952	+				+1.4
1,441,952	+				+0.3
1,441,953	-				-1.1
1,441,953	-				-1.6
1,441,953	-				-0.1
1,441,953	-				-0.2
1,441,972	+				+1.6
1,441,972	+				-2.5
1,441,972	+				-0.5
1,441,972	+				-0.6
1,441,972	+				-0.2
1,441,972	+				-0.9
1,441,972	+				+0.4
1,441,972	+				-1.3
1,441,972	+				+0.3
1,441,972	+				+1.5
1,441,972	+				+0.6
1,441,972	+				+1.4
1,441,973	-				+0.5
1,441,973	-				+0.3
1,441,973	-				+0.1
1,441,973	-				-0.1
1,441,973	-				-0.2
1,441,973	-				-1.2
1,441,973	-				-0.2
1,441,973	-				+0.7
1,441,973	-				-0.6
1,441,973	-				-0.9
1,441,976	+				+0.1
1,441,976	+				+0.4
1,441,976	+				+0.9
1,441,976	+				+0.7
1,441,976	+				-0.1
1,441,976	+				-0.1
1,441,977	-				-0.4
1,441,977	-				+0.1
1,441,977	-				+0.5
1,441,977	-				+1.1
1,441,977	-				-0.6
1,441,977	-				-1.0
1,441,977	-				+1.1
1,441,977	-				+1.6
1,441,977	-				-0.6
1,441,977	-				-0.3
1,441,977	-				-0.7
1,441,977	-				-0.3
1,441,982	+				+0.6
1,441,982	+				-0.3
1,441,982	+				-1.3
1,441,982	+				-0.2
1,441,982	+				+0.3
1,441,982	+				+0.6
1,441,982	+				+0.5
1,441,982	+				-0.4
1,441,982	+				-2.2
1,441,982	+				-0.9
1,441,982	+				-0.5
1,441,983	-				+0.2
1,441,983	-				-1.9
1,441,983	-				-0.6
1,441,983	-				-1.6
1,441,983	-				-0.2
1,441,983	-				+0.6
1,441,983	-				-0.5
1,441,983	-				-0.6
1,441,983	-				+0.1
1,441,983	-				+1.1
1,441,983	-				-0.9
1,441,999	+				-1.0
1,441,999	+				-0.9
1,442,000	-				-0.2
1,442,027	+				+0.4
1,442,027	+				-0.2
1,442,027	+				-0.3
1,442,027	+				+0.3
1,442,027	+				+0.2
1,442,027	+				+0.1
1,442,027	+				+0.4
1,442,027	+				-0.6
1,442,028	-				+1.1
1,442,028	-				-0.0
1,442,028	-				+0.7
1,442,028	-				+2.0
1,442,028	-				+0.3
1,442,032	+				-0.8
1,442,032	+				+0.1
1,442,032	+				-0.0
1,442,032	+				-2.0
1,442,032	+				-0.1
1,442,033	-				+1.7
1,442,033	-				+0.8
1,442,033	-				+0.2
1,442,033	-				-1.1
1,442,033	-				+0.3
1,442,033	-				+0.3
1,442,033	-				+0.0
1,442,033	-				+1.5
1,442,033	-				+0.5
1,442,033	-				+1.4
1,442,285	+				-1.6
1,442,286	-				+0.9
1,442,294	+				+1.1
1,442,294	+				-0.6
1,442,294	+				-0.9
1,442,294	+				+0.6
1,442,294	+				-1.3
1,442,294	+				-1.6
1,442,295	-				-2.2
1,442,295	-				-1.0
1,442,295	-				+0.2
1,442,295	-				-0.2
1,442,295	-				-3.6
1,442,360	-		PFLU_RS06450	0.12	+0.3
1,442,451	+		PFLU_RS06450	0.26	+0.5
1,442,730	-		PFLU_RS06450	0.69	+0.1
1,442,759	+		PFLU_RS06450	0.74	+0.0
1,442,759	+		PFLU_RS06450	0.74	+0.4
1,442,759	+		PFLU_RS06450	0.74	+0.3
1,442,759	+		PFLU_RS06450	0.74	+1.3
1,442,759	+		PFLU_RS06450	0.74	-0.6
1,442,759	+		PFLU_RS06450	0.74	+0.5
1,442,759	+		PFLU_RS06450	0.74	-2.8
1,442,759	+		PFLU_RS06450	0.74	+0.3
1,442,760	-		PFLU_RS06450	0.74	+1.3
1,442,760	-		PFLU_RS06450	0.74	-0.8
1,442,760	-		PFLU_RS06450	0.74	+2.0
1,442,868	+				-0.3
1,442,868	+				+1.3
1,442,868	+				-0.2
1,442,868	+				+0.9
1,442,868	+				+0.1
1,442,868	+				-1.3
1,442,868	+				+1.3
1,442,869	-				+1.1
1,442,869	-				+1.7
1,442,869	-				+0.8
1,442,982	+				+0.6
1,442,983	-				+2.9
1,442,983	-				-1.0
1,442,983	-				-0.8
1,442,983	-				-2.8
1,443,055	-				+0.5
1,443,126	+				-1.5
1,443,127	-				+0.9
1,443,188	+		PFLU_RS06455	0.10	-1.6
1,443,188	+		PFLU_RS06455	0.10	+1.7
1,443,188	+		PFLU_RS06455	0.10	-0.2
1,443,188	+		PFLU_RS06455	0.10	-1.3
1,443,188	+		PFLU_RS06455	0.10	+0.1
1,443,188	+		PFLU_RS06455	0.10	+1.0
1,443,189	-		PFLU_RS06455	0.10	-1.4
1,443,189	-		PFLU_RS06455	0.10	-0.0
1,443,189	-		PFLU_RS06455	0.10	-0.9
1,443,189	-		PFLU_RS06455	0.10	+0.4
1,443,199	+		PFLU_RS06455	0.11	-1.2
1,443,199	+		PFLU_RS06455	0.11	-0.8
1,443,199	+		PFLU_RS06455	0.11	-0.4
1,443,199	+		PFLU_RS06455	0.11	-1.2
1,443,199	+		PFLU_RS06455	0.11	+0.1
1,443,199	+		PFLU_RS06455	0.11	-0.5
1,443,200	-		PFLU_RS06455	0.11	-0.2
1,443,200	-		PFLU_RS06455	0.11	+1.7
1,443,200	-		PFLU_RS06455	0.11	+0.1
1,443,200	-		PFLU_RS06455	0.11	-0.8
1,443,200	-		PFLU_RS06455	0.11	-1.0
1,443,200	-		PFLU_RS06455	0.11	-0.5
1,443,200	-		PFLU_RS06455	0.11	+0.3
1,443,229	+		PFLU_RS06455	0.12	+0.7
1,443,229	+		PFLU_RS06455	0.12	+0.1
1,443,229	+		PFLU_RS06455	0.12	-2.6
1,443,229	+		PFLU_RS06455	0.12	-0.0
1,443,229	+		PFLU_RS06455	0.12	-0.3
1,443,229	+		PFLU_RS06455	0.12	+0.0
1,443,229	+		PFLU_RS06455	0.12	+0.3
1,443,229	+		PFLU_RS06455	0.12	+0.4
1,443,230	-		PFLU_RS06455	0.12	+1.6
1,443,230	-		PFLU_RS06455	0.12	+1.1
1,443,230	-		PFLU_RS06455	0.12	+0.4
1,443,230	-		PFLU_RS06455	0.12	+0.4
1,443,230	-		PFLU_RS06455	0.12	+0.1
1,443,230	-		PFLU_RS06455	0.12	-0.0
1,443,240	+		PFLU_RS06455	0.13	+1.7
1,443,421	+		PFLU_RS06455	0.20	-0.7
1,443,421	+		PFLU_RS06455	0.20	-0.0
1,443,422	-		PFLU_RS06455	0.20	+0.2
1,443,422	-		PFLU_RS06455	0.20	+0.0
1,443,422	-		PFLU_RS06455	0.20	+0.9
1,443,665	+		PFLU_RS06455	0.30	+0.7
1,443,666	-		PFLU_RS06455	0.30	+1.7
1,443,666	-		PFLU_RS06455	0.30	-0.1
1,443,788	+		PFLU_RS06455	0.35	+0.5
1,443,788	+		PFLU_RS06455	0.35	+0.4
1,443,788	+		PFLU_RS06455	0.35	-1.4
1,443,788	+		PFLU_RS06455	0.35	+1.7
1,443,788	+		PFLU_RS06455	0.35	+0.7
1,443,788	+		PFLU_RS06455	0.35	-0.9
1,443,788	+		PFLU_RS06455	0.35	+0.7
1,443,788	+		PFLU_RS06455	0.35	-0.0
1,443,788	+		PFLU_RS06455	0.35	+3.3
1,443,788	+		PFLU_RS06455	0.35	-0.6
1,443,788	+		PFLU_RS06455	0.35	-1.1
1,443,788	+		PFLU_RS06455	0.35	+0.1
1,443,788	+		PFLU_RS06455	0.35	-0.6
1,443,788	+		PFLU_RS06455	0.35	-1.5
1,443,788	+		PFLU_RS06455	0.35	-2.2
1,443,789	-		PFLU_RS06455	0.35	-0.1
1,443,789	-		PFLU_RS06455	0.35	-1.0
1,443,789	-		PFLU_RS06455	0.35	+0.3
1,443,789	-		PFLU_RS06455	0.35	+0.2
1,443,789	-		PFLU_RS06455	0.35	-0.9
1,443,789	-		PFLU_RS06455	0.35	-0.6
1,443,789	-		PFLU_RS06455	0.35	-0.1
1,443,789	-		PFLU_RS06455	0.35	+0.4
1,443,789	-		PFLU_RS06455	0.35	-1.1
1,443,789	-		PFLU_RS06455	0.35	+0.1
1,443,789	-		PFLU_RS06455	0.35	+1.5
1,443,789	-		PFLU_RS06455	0.35	-0.5
1,443,923	+		PFLU_RS06455	0.40	-1.5
1,443,924	-		PFLU_RS06455	0.40	-0.2