Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5414

Experiment: 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	20 mM putrescine
6,216,274	+		Pf6N2E2_5412	0.62	+0.1
6,216,274	+		Pf6N2E2_5412	0.62	+1.0
6,216,305	+		Pf6N2E2_5412	0.66	+0.1
6,216,471	+		Pf6N2E2_5412	0.83	+1.0
6,216,471	+		Pf6N2E2_5412	0.83	-0.2
6,216,471	+		Pf6N2E2_5412	0.83	+0.5
6,216,471	+		Pf6N2E2_5412	0.83	+0.6
6,216,472	-		Pf6N2E2_5412	0.84	-0.2
6,216,472	-		Pf6N2E2_5412	0.84	+1.1
6,216,477	+		Pf6N2E2_5412	0.84	+0.0
6,216,477	+		Pf6N2E2_5412	0.84	-0.6
6,216,477	+		Pf6N2E2_5412	0.84	-0.4
6,216,477	+		Pf6N2E2_5412	0.84	-0.6
6,216,478	-		Pf6N2E2_5412	0.84	-0.4
6,216,478	-		Pf6N2E2_5412	0.84	-0.9
6,216,478	-		Pf6N2E2_5412	0.84	-0.9
6,216,491	+		Pf6N2E2_5412	0.86	+0.4
6,216,491	+		Pf6N2E2_5412	0.86	+0.6
6,216,491	+		Pf6N2E2_5412	0.86	+0.9
6,216,491	+		Pf6N2E2_5412	0.86	-0.2
6,216,491	+		Pf6N2E2_5412	0.86	+0.2
6,216,519	+		Pf6N2E2_5412	0.89	+0.1
6,216,520	-		Pf6N2E2_5412	0.89	+0.1
6,216,520	-		Pf6N2E2_5412	0.89	+0.1
6,216,520	-		Pf6N2E2_5412	0.89	+0.7
6,216,520	-		Pf6N2E2_5412	0.89	-0.1
6,216,748	+				-1.4
6,216,748	+				-0.3
6,216,748	+				-1.2
6,216,749	-				+0.4
6,216,749	-				-1.9
6,216,749	-				+0.1
6,216,749	-				-0.2
6,216,749	-				+0.6
6,216,773	+				+0.2
6,216,774	-				-0.4
6,216,788	-		Pf6N2E2_5413	0.12	-0.3
6,216,941	-		Pf6N2E2_5413	0.56	-1.4
6,216,961	+		Pf6N2E2_5413	0.62	+0.9
6,216,961	+		Pf6N2E2_5413	0.62	-1.1
6,216,961	+		Pf6N2E2_5413	0.62	-0.9
6,216,962	-		Pf6N2E2_5413	0.62	-0.5
6,216,962	-		Pf6N2E2_5413	0.62	+0.4
6,216,962	-		Pf6N2E2_5413	0.62	-0.3
6,216,962	-		Pf6N2E2_5413	0.62	-0.6
6,217,109	-				-0.6
6,217,109	-				-0.1
6,217,179	+				-0.1
6,217,303	-		Pf6N2E2_5414	0.20	-0.9
6,217,326	+		Pf6N2E2_5414	0.22	+0.7
6,217,326	+		Pf6N2E2_5414	0.22	+0.1
6,217,327	-		Pf6N2E2_5414	0.22	-0.9
6,217,327	-		Pf6N2E2_5414	0.22	-0.9
6,217,327	-		Pf6N2E2_5414	0.22	+0.6
6,217,327	-		Pf6N2E2_5414	0.22	-0.3
6,217,327	-		Pf6N2E2_5414	0.22	+1.1
6,217,327	-		Pf6N2E2_5414	0.22	+1.1
6,217,414	-		Pf6N2E2_5414	0.31	-0.9
6,217,602	+		Pf6N2E2_5414	0.50	+1.1
6,217,602	+		Pf6N2E2_5414	0.50	-0.2
6,217,602	+		Pf6N2E2_5414	0.50	-0.5
6,217,602	+		Pf6N2E2_5414	0.50	-1.4
6,217,602	+		Pf6N2E2_5414	0.50	-0.6
6,217,602	+		Pf6N2E2_5414	0.50	+0.6
6,217,602	+		Pf6N2E2_5414	0.50	+0.3
6,217,602	+		Pf6N2E2_5414	0.50	+0.1
6,217,603	-		Pf6N2E2_5414	0.50	-0.9
6,217,603	-		Pf6N2E2_5414	0.50	-1.4
6,217,603	-		Pf6N2E2_5414	0.50	-1.0
6,217,603	-		Pf6N2E2_5414	0.50	-1.2
6,217,603	-		Pf6N2E2_5414	0.50	+0.1
6,217,603	-		Pf6N2E2_5414	0.50	-0.9
6,217,603	-		Pf6N2E2_5414	0.50	-0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.9
6,217,603	-		Pf6N2E2_5414	0.50	+0.1
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+0.7
6,217,603	-		Pf6N2E2_5414	0.50	-0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.1
6,217,756	-		Pf6N2E2_5414	0.65	+1.1
6,217,756	-		Pf6N2E2_5414	0.65	+0.4
6,217,969	+		Pf6N2E2_5414	0.86	-1.9
6,217,970	-		Pf6N2E2_5414	0.86	+0.5
6,217,971	+		Pf6N2E2_5414	0.86	+0.8
6,217,971	+		Pf6N2E2_5414	0.86	-0.4
6,217,971	+		Pf6N2E2_5414	0.86	+1.1
6,217,971	+		Pf6N2E2_5414	0.86	-0.4
6,217,971	+		Pf6N2E2_5414	0.86	+0.1
6,217,971	+		Pf6N2E2_5414	0.86	-0.0
6,217,971	+		Pf6N2E2_5414	0.86	-0.9
6,217,972	-		Pf6N2E2_5414	0.86	-0.1
6,217,972	-		Pf6N2E2_5414	0.86	+0.6
6,217,972	-		Pf6N2E2_5414	0.86	+0.6
6,217,972	-		Pf6N2E2_5414	0.86	-0.7
6,217,972	-		Pf6N2E2_5414	0.86	+0.7
6,217,972	-		Pf6N2E2_5414	0.86	+0.1
6,217,972	-		Pf6N2E2_5414	0.86	-0.7
6,217,972	-		Pf6N2E2_5414	0.86	-0.4
6,217,972	-		Pf6N2E2_5414	0.86	+0.5
6,217,972	-		Pf6N2E2_5414	0.86	+0.7
6,218,164	+				+0.4
6,218,165	-				+0.7
6,218,222	+				-0.2
6,218,222	+				+0.7
6,218,222	+				-1.4
6,218,222	+				+0.1
6,218,222	+				-1.4
6,218,222	+				+0.4
6,218,222	+				+0.1
6,218,222	+				+0.1
6,218,222	+				-0.4
6,218,222	+				-0.4
6,218,222	+				+0.1
6,218,222	+				+0.1
6,218,222	+				+0.4
6,218,222	+				+0.3
6,218,222	+				-0.7
6,218,222	+				-0.2
6,218,222	+				-0.1
6,218,222	+				-0.1
6,218,222	+				-0.3
6,218,222	+				-0.6
6,218,222	+				-0.6
6,218,222	+				-1.2
6,218,222	+				-0.6
6,218,222	+				+1.7
6,218,223	-				-0.6
6,218,223	-				+1.1
6,218,223	-				-0.1
6,218,223	-				-1.6
6,218,223	-				-0.2
6,218,223	-				-0.3
6,218,223	-				+0.2
6,218,223	-				+0.1
6,218,223	-				-0.3
6,218,223	-				-1.3
6,218,223	-				-0.2
6,218,223	-				-1.1
6,218,223	-				-0.4
6,218,223	-				+0.6
6,218,223	-				-0.6
6,218,223	-				+0.6
6,218,223	-				+0.4
6,218,223	-				-0.1
6,218,223	-				-0.7
6,218,225	-				+0.1
6,218,244	+				+0.6
6,218,274	+				-0.4
6,218,274	+				+0.6
6,218,274	+				-0.6
6,218,274	+				+1.6
6,218,275	-				+0.7
6,218,284	+				-0.1
6,218,284	+				+0.0
6,218,389	+				-0.1
6,218,389	+				-0.4
6,218,389	+				+1.0
6,218,389	+				+0.1
6,218,389	+				-0.4
6,218,389	+				-1.2
6,218,389	+				+0.6
6,218,389	+				+0.4
6,218,389	+				-1.0
6,218,389	+				+0.1
6,218,389	+				-0.4
6,218,389	+				+1.0
6,218,390	-				+0.1
6,218,390	-				+0.1
6,218,390	-				+0.4
6,218,392	+				+0.1
6,218,393	-				+0.1
6,218,487	+				-0.4
6,218,501	+				-0.4
6,218,501	+				-0.9
6,218,501	+				-0.6
6,218,501	+				-1.2
6,218,502	-				-0.9
6,218,502	-				-0.4
6,218,512	+				-0.3
6,218,513	-				+0.1
6,218,516	-				+0.1
6,218,550	+		Pf6N2E2_5415	0.16	+1.7
6,218,783	+				-0.6