Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3872

Experiment: 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
4,502,130	-		Pf6N2E2_3870	0.63	+0.6
4,502,406	+		Pf6N2E2_3871	0.14	-1.2
4,502,406	+		Pf6N2E2_3871	0.14	-0.7
4,502,406	+		Pf6N2E2_3871	0.14	-1.8
4,502,407	-		Pf6N2E2_3871	0.14	+1.3
4,502,407	-		Pf6N2E2_3871	0.14	+0.2
4,502,457	+		Pf6N2E2_3871	0.21	+0.3
4,502,457	+		Pf6N2E2_3871	0.21	+0.3
4,502,458	-		Pf6N2E2_3871	0.21	+1.3
4,502,494	-		Pf6N2E2_3871	0.26	-1.2
4,502,682	+		Pf6N2E2_3871	0.51	-2.0
4,502,778	+		Pf6N2E2_3871	0.64	-0.7
4,502,778	+		Pf6N2E2_3871	0.64	-0.2
4,502,778	+		Pf6N2E2_3871	0.64	-0.4
4,502,778	+		Pf6N2E2_3871	0.64	+0.3
4,502,778	+		Pf6N2E2_3871	0.64	-1.2
4,502,778	+		Pf6N2E2_3871	0.64	-1.7
4,502,778	+		Pf6N2E2_3871	0.64	+1.3
4,502,778	+		Pf6N2E2_3871	0.64	-0.6
4,502,778	+		Pf6N2E2_3871	0.64	+0.0
4,502,778	+		Pf6N2E2_3871	0.64	-0.5
4,502,778	+		Pf6N2E2_3871	0.64	-0.7
4,502,778	+		Pf6N2E2_3871	0.64	-0.0
4,502,778	+		Pf6N2E2_3871	0.64	-0.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.8
4,502,779	-		Pf6N2E2_3871	0.64	+1.4
4,502,779	-		Pf6N2E2_3871	0.64	-0.1
4,502,779	-		Pf6N2E2_3871	0.64	+1.7
4,502,779	-		Pf6N2E2_3871	0.64	+0.0
4,502,779	-		Pf6N2E2_3871	0.64	-0.0
4,502,779	-		Pf6N2E2_3871	0.64	+1.5
4,502,779	-		Pf6N2E2_3871	0.64	+0.6
4,502,779	-		Pf6N2E2_3871	0.64	+0.8
4,502,779	-		Pf6N2E2_3871	0.64	+0.9
4,502,779	-		Pf6N2E2_3871	0.64	+1.0
4,502,805	+		Pf6N2E2_3871	0.67	-1.0
4,502,805	+		Pf6N2E2_3871	0.67	+0.3
4,502,806	-		Pf6N2E2_3871	0.67	+0.3
4,502,806	-		Pf6N2E2_3871	0.67	+0.6
4,502,806	-		Pf6N2E2_3871	0.67	+1.6
4,502,806	-		Pf6N2E2_3871	0.67	+1.1
4,502,806	-		Pf6N2E2_3871	0.67	+1.7
4,502,806	-		Pf6N2E2_3871	0.67	+0.9
4,502,842	+		Pf6N2E2_3871	0.72	-0.2
4,502,842	+		Pf6N2E2_3871	0.72	-0.2
4,502,843	-				+0.3
4,502,850	+		Pf6N2E2_3871	0.73	+1.9
4,502,851	-		Pf6N2E2_3871	0.73	-0.1
4,502,851	-		Pf6N2E2_3871	0.73	+0.3
4,502,865	+		Pf6N2E2_3871	0.75	+0.0
4,502,901	+		Pf6N2E2_3871	0.80	-0.1
4,502,902	-		Pf6N2E2_3871	0.80	+0.3
4,502,902	-		Pf6N2E2_3871	0.80	+0.9
4,502,904	+		Pf6N2E2_3871	0.80	+0.3
4,502,904	+		Pf6N2E2_3871	0.80	-0.8
4,502,904	+		Pf6N2E2_3871	0.80	+0.3
4,502,904	+		Pf6N2E2_3871	0.80	-0.7
4,502,905	-		Pf6N2E2_3871	0.81	+1.1
4,502,905	-		Pf6N2E2_3871	0.81	+0.3
4,502,905	-		Pf6N2E2_3871	0.81	-0.8
4,502,905	-		Pf6N2E2_3871	0.81	+2.3
4,502,905	-		Pf6N2E2_3871	0.81	+0.2
4,502,905	-		Pf6N2E2_3871	0.81	+1.1
4,502,967	+		Pf6N2E2_3871	0.89	-0.7
4,502,968	-		Pf6N2E2_3871	0.89	+1.3
4,503,000	+				-0.2
4,503,000	+				-0.9
4,503,000	+				+0.3
4,503,000	+				-0.7
4,503,001	-				+0.6
4,503,001	-				+0.3
4,503,001	-				+1.2
4,503,056	+				+0.3
4,503,056	+				-0.2
4,503,057	-				-0.5
4,503,057	-				+0.9
4,503,081	+				-0.9
4,503,082	-				+1.5
4,503,086	+				-1.0
4,503,086	+				-3.0
4,503,086	+				-0.2
4,503,086	+				-0.8
4,503,086	+				-1.1
4,503,086	+				+0.7
4,503,087	-				+1.9
4,503,087	-				-0.2
4,503,089	+				-2.5
4,503,089	+				-1.4
4,503,102	+				-0.6
4,503,102	+				-0.7
4,503,118	+				-1.2
4,503,118	+				-0.8
4,503,119	-				+0.9
4,503,169	+		Pf6N2E2_3872	0.44	-0.1
4,503,169	+		Pf6N2E2_3872	0.44	-0.7
4,503,170	-		Pf6N2E2_3872	0.45	-1.4
4,503,170	-		Pf6N2E2_3872	0.45	+1.9
4,503,255	+				+0.0
4,503,256	-				-0.1
4,503,256	-				+0.1
4,503,259	+				+0.3
4,503,259	+				-0.4
4,503,260	-				+0.3
4,503,260	-				+0.3
4,503,378	+				+0.5
4,503,380	+				+0.3
4,503,380	+				-2.0
4,503,386	+				+1.3
4,503,386	+				+0.6
4,503,386	+				-0.5
4,503,386	+				+0.3
4,503,386	+				+0.3
4,503,386	+				+1.0
4,503,386	+				+0.3
4,503,386	+				-0.5
4,503,386	+				+0.5
4,503,386	+				+1.7
4,503,386	+				+0.3
4,503,386	+				+0.3
4,503,387	-				-1.7
4,503,387	-				+1.9
4,503,387	-				-1.2
4,503,387	-				+0.3
4,503,387	-				-0.2
4,503,387	-				-2.0
4,503,387	-				+0.1
4,503,387	-				+0.3
4,503,387	-				-0.1
4,503,387	-				+0.3
4,503,387	-				-0.3
4,503,387	-				-1.2
4,503,387	-				+0.9
4,503,422	+				+0.0
4,503,422	+				+0.8
4,503,461	+				+0.3
4,503,462	-				-0.6
4,503,545	+		Pf6N2E2_3873	0.11	+0.3
4,503,545	+		Pf6N2E2_3873	0.11	+0.3
4,503,545	+		Pf6N2E2_3873	0.11	-1.0
4,503,545	+		Pf6N2E2_3873	0.11	-0.7
4,503,546	-		Pf6N2E2_3873	0.11	-0.1
4,503,546	-		Pf6N2E2_3873	0.11	-2.2
4,503,546	-		Pf6N2E2_3873	0.11	-0.1
4,503,607	-		Pf6N2E2_3873	0.16	+0.3
4,503,620	+		Pf6N2E2_3873	0.17	+0.3
4,503,620	+		Pf6N2E2_3873	0.17	+1.0
4,503,620	+		Pf6N2E2_3873	0.17	+0.3
4,503,620	+		Pf6N2E2_3873	0.17	+0.9
4,503,620	+		Pf6N2E2_3873	0.17	+0.8
4,503,620	+		Pf6N2E2_3873	0.17	-2.2
4,503,620	+		Pf6N2E2_3873	0.17	-1.0
4,503,620	+		Pf6N2E2_3873	0.17	+0.0
4,503,620	+		Pf6N2E2_3873	0.17	+0.8
4,503,620	+		Pf6N2E2_3873	0.17	+0.5
4,503,621	-		Pf6N2E2_3873	0.17	-0.9
4,503,621	-		Pf6N2E2_3873	0.17	+0.3
4,503,621	-		Pf6N2E2_3873	0.17	+1.3
4,503,621	-		Pf6N2E2_3873	0.17	-1.0
4,503,621	-		Pf6N2E2_3873	0.17	+0.1
4,503,630	+		Pf6N2E2_3873	0.18	+0.8
4,503,630	+		Pf6N2E2_3873	0.18	+0.3
4,503,630	+		Pf6N2E2_3873	0.18	+0.8
4,503,630	+		Pf6N2E2_3873	0.18	-0.9
4,503,630	+		Pf6N2E2_3873	0.18	+0.3
4,503,631	-		Pf6N2E2_3873	0.18	+0.3
4,503,631	-		Pf6N2E2_3873	0.18	+0.3
4,503,631	-		Pf6N2E2_3873	0.18	+0.3
4,503,631	-		Pf6N2E2_3873	0.18	+0.8
4,503,631	-		Pf6N2E2_3873	0.18	-0.7
4,503,631	-		Pf6N2E2_3873	0.18	-0.5
4,503,631	-		Pf6N2E2_3873	0.18	+0.9
4,503,631	-		Pf6N2E2_3873	0.18	-2.0
4,503,632	+		Pf6N2E2_3873	0.18	+0.0
4,503,632	+		Pf6N2E2_3873	0.18	+0.3
4,503,632	+		Pf6N2E2_3873	0.18	+0.3
4,503,632	+		Pf6N2E2_3873	0.18	-1.2
4,503,632	+		Pf6N2E2_3873	0.18	-0.7
4,503,632	+		Pf6N2E2_3873	0.18	+0.3
4,503,633	-		Pf6N2E2_3873	0.18	-1.2
4,503,633	-		Pf6N2E2_3873	0.18	-0.4
4,503,633	-		Pf6N2E2_3873	0.18	-1.2
4,503,633	-		Pf6N2E2_3873	0.18	+0.3
4,503,633	-		Pf6N2E2_3873	0.18	+0.3
4,503,633	-		Pf6N2E2_3873	0.18	+0.1
4,503,633	-		Pf6N2E2_3873	0.18	+0.3
4,503,722	+		Pf6N2E2_3873	0.25	+0.1
4,503,737	+		Pf6N2E2_3873	0.26	+0.6
4,503,737	+		Pf6N2E2_3873	0.26	+0.3
4,503,737	+		Pf6N2E2_3873	0.26	+0.3
4,503,744	+		Pf6N2E2_3873	0.26	-1.1
4,503,744	+		Pf6N2E2_3873	0.26	-0.7
4,503,745	-		Pf6N2E2_3873	0.27	+0.3
4,503,797	+		Pf6N2E2_3873	0.31	-1.0
4,503,923	+		Pf6N2E2_3873	0.40	-1.2
4,503,923	+		Pf6N2E2_3873	0.40	-0.2
4,503,923	+		Pf6N2E2_3873	0.40	-0.7
4,503,923	+		Pf6N2E2_3873	0.40	-0.7
4,503,923	+		Pf6N2E2_3873	0.40	+0.1
4,503,923	+		Pf6N2E2_3873	0.40	+2.1
4,503,923	+		Pf6N2E2_3873	0.40	-0.7
4,503,924	-		Pf6N2E2_3873	0.40	-1.7
4,503,924	-		Pf6N2E2_3873	0.40	+0.3
4,503,924	-		Pf6N2E2_3873	0.40	-0.6
4,503,924	-		Pf6N2E2_3873	0.40	+1.3
4,503,924	-		Pf6N2E2_3873	0.40	-1.2
4,503,924	-		Pf6N2E2_3873	0.40	+0.3
4,503,924	-		Pf6N2E2_3873	0.40	+1.6
4,503,924	-		Pf6N2E2_3873	0.40	+0.5
4,503,924	-		Pf6N2E2_3873	0.40	-0.2
4,503,924	-		Pf6N2E2_3873	0.40	+0.3
4,503,998	+		Pf6N2E2_3873	0.46	+0.3
4,503,998	+		Pf6N2E2_3873	0.46	+0.1
4,503,998	+		Pf6N2E2_3873	0.46	+0.9
4,503,998	+		Pf6N2E2_3873	0.46	+0.7
4,503,998	+		Pf6N2E2_3873	0.46	-0.2
4,503,999	-		Pf6N2E2_3873	0.46	-0.7
4,503,999	-		Pf6N2E2_3873	0.46	+0.0
4,503,999	-		Pf6N2E2_3873	0.46	-0.0
4,503,999	-		Pf6N2E2_3873	0.46	-0.3
4,503,999	-		Pf6N2E2_3873	0.46	+0.3
4,503,999	-		Pf6N2E2_3873	0.46	+0.3
4,503,999	-		Pf6N2E2_3873	0.46	-0.7
4,503,999	-		Pf6N2E2_3873	0.46	+1.6
4,503,999	-		Pf6N2E2_3873	0.46	-0.1
4,503,999	-		Pf6N2E2_3873	0.46	-0.8
4,503,999	-		Pf6N2E2_3873	0.46	+0.3
4,504,013	+		Pf6N2E2_3873	0.47	-0.7
4,504,013	+		Pf6N2E2_3873	0.47	-2.2
4,504,013	+		Pf6N2E2_3873	0.47	-1.2
4,504,013	+		Pf6N2E2_3873	0.47	-1.1
4,504,013	+		Pf6N2E2_3873	0.47	+0.3
4,504,014	-		Pf6N2E2_3873	0.47	-0.7
4,504,014	-		Pf6N2E2_3873	0.47	-0.1
4,504,014	-		Pf6N2E2_3873	0.47	-0.5
4,504,014	-		Pf6N2E2_3873	0.47	-0.3
4,504,028	-		Pf6N2E2_3873	0.49	+0.3
4,504,028	-		Pf6N2E2_3873	0.49	-1.2
4,504,028	-		Pf6N2E2_3873	0.49	-0.3
4,504,028	-		Pf6N2E2_3873	0.49	+1.3
4,504,028	-		Pf6N2E2_3873	0.49	-1.2
4,504,049	+		Pf6N2E2_3873	0.50	-0.7
4,504,082	+		Pf6N2E2_3873	0.53	-0.7
4,504,083	-		Pf6N2E2_3873	0.53	-0.7
4,504,083	-		Pf6N2E2_3873	0.53	-1.2
4,504,083	-		Pf6N2E2_3873	0.53	-0.8
4,504,220	+		Pf6N2E2_3873	0.63	+0.3
4,504,220	+		Pf6N2E2_3873	0.63	+1.3
4,504,221	-		Pf6N2E2_3873	0.64	-0.1
4,504,221	-		Pf6N2E2_3873	0.64	+0.9
4,504,221	-		Pf6N2E2_3873	0.64	+0.3
4,504,221	-		Pf6N2E2_3873	0.64	+0.3