Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29905

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
6,653,148	+		PFLU_RS29900	0.68	+0.8
6,653,376	+		PFLU_RS29900	0.78	-1.0
6,653,376	+		PFLU_RS29900	0.78	-0.4
6,653,376	+		PFLU_RS29900	0.78	-0.7
6,653,376	+		PFLU_RS29900	0.78	-1.3
6,653,377	-		PFLU_RS29900	0.78	+0.6
6,653,377	-		PFLU_RS29900	0.78	+1.6
6,653,377	-		PFLU_RS29900	0.78	-0.0
6,653,377	-		PFLU_RS29900	0.78	-0.2
6,653,377	-		PFLU_RS29900	0.78	-0.0
6,653,377	-		PFLU_RS29900	0.78	-0.0
6,653,377	-		PFLU_RS29900	0.78	+0.7
6,653,377	-		PFLU_RS29900	0.78	+4.1
6,653,377	-		PFLU_RS29900	0.78	-0.9
6,653,377	-		PFLU_RS29900	0.78	-1.3
6,653,469	+		PFLU_RS29900	0.83	+0.8
6,653,469	+		PFLU_RS29900	0.83	+1.8
6,653,470	-		PFLU_RS29900	0.83	-0.2
6,653,470	-		PFLU_RS29900	0.83	-0.4
6,653,470	-		PFLU_RS29900	0.83	-0.4
6,653,470	-		PFLU_RS29900	0.83	-2.8
6,653,470	-		PFLU_RS29900	0.83	-1.4
6,653,470	-		PFLU_RS29900	0.83	+1.1
6,653,470	-		PFLU_RS29900	0.83	+0.1
6,653,511	+		PFLU_RS29900	0.84	+0.4
6,653,512	-		PFLU_RS29900	0.85	+1.1
6,653,512	-		PFLU_RS29900	0.85	+0.0
6,653,512	-		PFLU_RS29900	0.85	-2.0
6,653,512	-		PFLU_RS29900	0.85	+0.8
6,653,512	-		PFLU_RS29900	0.85	-0.3
6,653,512	-		PFLU_RS29900	0.85	-0.9
6,653,533	-		PFLU_RS29900	0.85	+1.1
6,653,547	+		PFLU_RS29900	0.86	-2.0
6,653,547	+		PFLU_RS29900	0.86	-1.2
6,653,547	+		PFLU_RS29900	0.86	-1.9
6,653,547	+		PFLU_RS29900	0.86	+3.9
6,653,548	-		PFLU_RS29900	0.86	-1.2
6,653,548	-		PFLU_RS29900	0.86	-0.2
6,653,548	-		PFLU_RS29900	0.86	+3.1
6,653,548	-		PFLU_RS29900	0.86	-0.6
6,653,548	-		PFLU_RS29900	0.86	+0.6
6,653,548	-		PFLU_RS29900	0.86	+0.1
6,653,548	-		PFLU_RS29900	0.86	+0.1
6,653,570	-		PFLU_RS29900	0.87	-0.9
6,653,663	+				-3.1
6,653,663	+				+0.3
6,653,663	+				+0.4
6,653,663	+				-0.4
6,653,663	+				-0.2
6,653,663	+				-0.7
6,653,663	+				-1.1
6,653,664	-				-0.7
6,653,664	-				+1.4
6,653,664	-				+1.8
6,653,664	-				+1.6
6,653,664	-				-2.4
6,653,908	+				+0.4
6,653,908	+				-1.1
6,653,908	+				+0.6
6,653,908	+				-0.6
6,653,908	+				+1.1
6,653,909	-				+0.7
6,653,909	-				+0.3
6,653,909	-				-0.6
6,653,909	-				-0.6
6,653,909	-				+0.9
6,653,909	-				-0.4
6,653,909	-				+0.3
6,653,909	-				-0.4
6,653,938	+				-2.9
6,653,956	+				-0.4
6,653,956	+				-0.4
6,653,956	+				-0.2
6,653,962	+				-1.0
6,653,962	+				-3.1
6,653,963	-				+0.5
6,653,963	-				+1.5
6,653,963	-				-0.2
6,653,963	-				-1.5
6,653,963	-				-0.2
6,653,963	-				+0.4
6,653,963	-				+0.5
6,653,963	-				+0.3
6,653,963	-				+0.3
6,653,965	+				-0.4
6,653,965	+				-0.7
6,653,965	+				-1.6
6,653,965	+				+1.0
6,653,965	+				+0.5
6,653,965	+				-0.6
6,653,965	+				+0.4
6,653,965	+				+0.9
6,653,965	+				-0.0
6,653,965	+				-1.3
6,653,965	+				-1.0
6,653,965	+				-0.1
6,653,965	+				+0.8
6,653,965	+				-0.8
6,653,965	+				+0.2
6,653,966	-				+1.4
6,653,966	-				-0.4
6,653,966	-				+0.1
6,653,966	-				+0.6
6,653,966	-				+0.8
6,653,966	-				-0.4
6,653,966	-				-0.9
6,653,966	-				-0.9
6,653,966	-				-0.3
6,653,966	-				+1.4
6,653,972	+				+0.1
6,653,995	+				+0.2
6,653,996	-				-0.2
6,653,996	-				-0.3
6,654,015	+				-0.4
6,654,015	+				+0.1
6,654,015	+				-0.4
6,654,015	+				+0.2
6,654,015	+				-1.1
6,654,016	-				-1.0
6,654,016	-				-1.6
6,654,016	-				-1.9
6,654,016	-				-0.4
6,654,016	-				+3.7
6,654,016	-				+0.5
6,654,016	-				+1.1
6,654,016	-				-1.4
6,654,016	-				-1.0
6,654,036	+				-1.3
6,654,036	+				+0.3
6,654,036	+				-0.3
6,654,037	-				-0.3
6,654,037	-				-1.7
6,654,037	-				+1.0
6,654,037	-				-0.2
6,654,086	+				-0.5
6,654,086	+				+0.8
6,654,101	+				+0.0
6,654,101	+				+0.8
6,654,102	-				+2.4
6,654,102	-				+1.1
6,654,102	-				-0.3
6,654,472	+		PFLU_RS29905	0.44	+1.3
6,654,472	+		PFLU_RS29905	0.44	-2.5
6,654,472	+		PFLU_RS29905	0.44	+1.7
6,654,472	+		PFLU_RS29905	0.44	-0.7
6,654,472	+		PFLU_RS29905	0.44	-1.0
6,654,472	+		PFLU_RS29905	0.44	-0.8
6,654,472	+		PFLU_RS29905	0.44	-2.1
6,654,472	+		PFLU_RS29905	0.44	-0.7
6,654,472	+		PFLU_RS29905	0.44	-0.4
6,654,472	+		PFLU_RS29905	0.44	+1.3
6,654,472	+		PFLU_RS29905	0.44	+0.1
6,654,472	+		PFLU_RS29905	0.44	+1.5
6,654,472	+		PFLU_RS29905	0.44	+1.9
6,654,472	+		PFLU_RS29905	0.44	+2.1
6,654,473	-		PFLU_RS29905	0.44	-0.9
6,654,473	-		PFLU_RS29905	0.44	-0.4
6,654,473	-		PFLU_RS29905	0.44	+0.6
6,654,473	-		PFLU_RS29905	0.44	+0.1
6,654,473	-		PFLU_RS29905	0.44	-1.4
6,654,473	-		PFLU_RS29905	0.44	-0.4
6,654,473	-		PFLU_RS29905	0.44	-0.2
6,654,473	-		PFLU_RS29905	0.44	-0.4
6,654,473	-		PFLU_RS29905	0.44	+3.1
6,654,473	-		PFLU_RS29905	0.44	+2.1
6,654,473	-		PFLU_RS29905	0.44	+0.3
6,654,473	-		PFLU_RS29905	0.44	-1.2
6,654,473	-		PFLU_RS29905	0.44	+0.7
6,654,473	-		PFLU_RS29905	0.44	-1.4
6,654,473	-		PFLU_RS29905	0.44	+0.1
6,654,473	-		PFLU_RS29905	0.44	+1.1
6,654,473	-		PFLU_RS29905	0.44	+2.9
6,654,759	+		PFLU_RS29905	0.77	-0.7
6,654,759	+		PFLU_RS29905	0.77	-1.0
6,654,759	+		PFLU_RS29905	0.77	-0.7
6,654,759	+		PFLU_RS29905	0.77	-0.2
6,654,759	+		PFLU_RS29905	0.77	+0.6
6,654,759	+		PFLU_RS29905	0.77	+0.1
6,654,759	+		PFLU_RS29905	0.77	-1.9
6,654,759	+		PFLU_RS29905	0.77	+0.8
6,654,759	+		PFLU_RS29905	0.77	-0.2
6,654,759	+		PFLU_RS29905	0.77	-1.5
6,654,759	+		PFLU_RS29905	0.77	-1.0
6,654,760	-		PFLU_RS29905	0.77	+0.3
6,654,760	-		PFLU_RS29905	0.77	+0.6
6,654,760	-		PFLU_RS29905	0.77	+1.1
6,654,760	-		PFLU_RS29905	0.77	-1.2
6,654,779	-		PFLU_RS29905	0.80	+0.3
6,654,842	-		PFLU_RS29905	0.87	-1.4
6,654,969	+				-0.9
6,654,970	-				+3.1
6,654,970	-				+0.6
6,654,981	-				+0.6
6,654,981	-				+0.8
6,654,981	-				+0.1
6,655,012	+				-0.6
6,655,012	+				-0.6
6,655,029	+				-0.4
6,655,029	+				-0.7
6,655,029	+				-1.6
6,655,029	+				+0.9
6,655,029	+				+1.8
6,655,029	+				+0.5
6,655,029	+				+0.4
6,655,029	+				+0.3
6,655,029	+				-1.3
6,655,029	+				-0.1
6,655,029	+				-2.0
6,655,029	+				+0.7
6,655,029	+				-1.1
6,655,029	+				+0.6
6,655,030	-				-0.0
6,655,030	-				-0.9
6,655,030	-				-0.2
6,655,030	-				+0.4
6,655,030	-				-1.6
6,655,030	-				+0.9
6,655,030	-				+1.1
6,655,030	-				-0.1
6,655,030	-				+1.4
6,655,030	-				+0.4
6,655,031	+				+0.1
6,655,032	-				+0.4
6,655,039	+				+0.6
6,655,039	+				+0.8
6,655,039	+				-0.0
6,655,039	+				+0.6
6,655,039	+				+0.7
6,655,039	+				+1.6
6,655,039	+				+0.1
6,655,039	+				-0.1
6,655,039	+				+0.3
6,655,039	+				+0.3
6,655,039	+				+0.6
6,655,039	+				+0.7
6,655,039	+				+0.0
6,655,039	+				-2.1
6,655,039	+				+0.4
6,655,039	+				-1.1
6,655,039	+				-0.8
6,655,040	-				+0.6
6,655,040	-				-1.3
6,655,040	-				-0.2
6,655,040	-				-0.1
6,655,040	-				-0.3
6,655,040	-				+1.2
6,655,040	-				+0.8
6,655,040	-				+0.9
6,655,040	-				+3.5
6,655,040	-				-0.3
6,655,040	-				+0.3
6,655,040	-				-0.6
6,655,040	-				+0.6
6,655,040	-				+0.3
6,655,040	-				-0.4
6,655,040	-				-0.5
6,655,040	-				+0.8
6,655,044	+				-0.8
6,655,044	+				-1.0
6,655,045	-				+0.3
6,655,045	-				+1.0
6,655,045	-				+0.7
6,655,045	-				+0.9
6,655,045	-				+1.8
6,655,045	-				-0.3
6,655,045	-				-1.7
6,655,045	-				+0.7
6,655,045	-				+0.3
6,655,046	+				+0.3
6,655,046	+				-0.0
6,655,046	+				+0.1
6,655,047	-				-0.3
6,655,047	-				+0.7
6,655,047	-				+0.3
6,655,047	-				-0.5
6,655,047	-				-0.4
6,655,058	-				+1.0
6,655,058	-				-0.1
6,655,059	+				-1.8
6,655,059	+				-0.3
6,655,059	+				+0.1
6,655,060	-				-0.3
6,655,060	-				+0.5
6,655,073	+				+0.5
6,655,073	+				-0.1
6,655,073	+				-0.1
6,655,073	+				-0.3
6,655,073	+				+0.6
6,655,073	+				-1.6
6,655,073	+				+0.5
6,655,073	+				-1.9
6,655,074	-				+0.3
6,655,074	-				-0.3
6,655,074	-				+0.1
6,655,074	-				-1.4
6,655,074	-				-0.2
6,655,074	-				+0.6
6,655,074	-				-1.0
6,655,074	-				-1.6
6,655,074	-				-0.1
6,655,251	+		PFLU_RS29910	0.39	+2.1
6,655,251	+		PFLU_RS29910	0.39	-2.3
6,655,251	+		PFLU_RS29910	0.39	+2.9
6,655,251	+		PFLU_RS29910	0.39	+1.1
6,655,252	-		PFLU_RS29910	0.39	+1.3
6,655,252	-		PFLU_RS29910	0.39	+0.6
6,655,252	-		PFLU_RS29910	0.39	-0.4
6,655,252	-		PFLU_RS29910	0.39	-1.0
6,655,252	-		PFLU_RS29910	0.39	-0.2
6,655,295	+		PFLU_RS29910	0.50	+0.4
6,655,295	+		PFLU_RS29910	0.50	+1.4
6,655,295	+		PFLU_RS29910	0.50	+2.8
6,655,295	+		PFLU_RS29910	0.50	-2.7
6,655,295	+		PFLU_RS29910	0.50	+0.0
6,655,295	+		PFLU_RS29910	0.50	+0.9
6,655,295	+		PFLU_RS29910	0.50	+1.1
6,655,296	-		PFLU_RS29910	0.50	+1.9
6,655,299	+		PFLU_RS29910	0.51	+0.6
6,655,299	+		PFLU_RS29910	0.51	-0.8
6,655,299	+		PFLU_RS29910	0.51	+0.4
6,655,299	+		PFLU_RS29910	0.51	+1.3
6,655,299	+		PFLU_RS29910	0.51	-0.3
6,655,299	+		PFLU_RS29910	0.51	+0.7
6,655,299	+		PFLU_RS29910	0.51	+1.7
6,655,299	+		PFLU_RS29910	0.51	-0.4
6,655,299	+		PFLU_RS29910	0.51	-1.4
6,655,299	+		PFLU_RS29910	0.51	-0.1
6,655,299	+		PFLU_RS29910	0.51	+0.7
6,655,299	+		PFLU_RS29910	0.51	+0.3
6,655,299	+		PFLU_RS29910	0.51	+1.4
6,655,299	+		PFLU_RS29910	0.51	+1.5
6,655,299	+		PFLU_RS29910	0.51	-0.9
6,655,299	+		PFLU_RS29910	0.51	+1.1
6,655,299	+		PFLU_RS29910	0.51	+0.3
6,655,300	-		PFLU_RS29910	0.51	+1.1
6,655,300	-		PFLU_RS29910	0.51	-0.9
6,655,300	-		PFLU_RS29910	0.51	+0.0
6,655,300	-		PFLU_RS29910	0.51	+0.1
6,655,300	-		PFLU_RS29910	0.51	+0.7
6,655,300	-		PFLU_RS29910	0.51	-2.3
6,655,300	-		PFLU_RS29910	0.51	-1.2
6,655,300	-		PFLU_RS29910	0.51	-0.4
6,655,300	-		PFLU_RS29910	0.51	-0.9
6,655,359	-		PFLU_RS29910	0.65	-1.4
6,655,380	+		PFLU_RS29910	0.71	-0.4
6,655,381	-		PFLU_RS29910	0.71	+0.6
6,655,381	-		PFLU_RS29910	0.71	+0.9
6,655,381	-		PFLU_RS29910	0.71	-2.0
6,655,383	+		PFLU_RS29910	0.71	-0.4
6,655,383	+		PFLU_RS29910	0.71	+1.3
6,655,383	+		PFLU_RS29910	0.71	-2.2
6,655,383	+		PFLU_RS29910	0.71	-0.1
6,655,383	+		PFLU_RS29910	0.71	+0.0
6,655,383	+		PFLU_RS29910	0.71	-1.9
6,655,383	+		PFLU_RS29910	0.71	+0.3
6,655,383	+		PFLU_RS29910	0.71	-2.3
6,655,383	+		PFLU_RS29910	0.71	+0.1
6,655,383	+		PFLU_RS29910	0.71	+0.1
6,655,383	+		PFLU_RS29910	0.71	+0.7
6,655,383	+		PFLU_RS29910	0.71	+0.2
6,655,383	+		PFLU_RS29910	0.71	-1.2
6,655,383	+		PFLU_RS29910	0.71	-0.2
6,655,384	-		PFLU_RS29910	0.72	-0.2
6,655,384	-		PFLU_RS29910	0.72	-0.4
6,655,384	-		PFLU_RS29910	0.72	-0.2
6,655,384	-		PFLU_RS29910	0.72	-0.9
6,655,384	-		PFLU_RS29910	0.72	-0.9
6,655,384	-		PFLU_RS29910	0.72	+1.7
6,655,384	-		PFLU_RS29910	0.72	+0.1
6,655,384	-		PFLU_RS29910	0.72	-0.1
6,655,384	-		PFLU_RS29910	0.72	+0.3
6,655,384	-		PFLU_RS29910	0.72	+0.4
6,655,384	-		PFLU_RS29910	0.72	-1.3
6,655,384	-		PFLU_RS29910	0.72	-0.3
6,655,384	-		PFLU_RS29910	0.72	-1.4
6,655,384	-		PFLU_RS29910	0.72	+0.1
6,655,384	-		PFLU_RS29910	0.72	-0.2
6,655,384	-		PFLU_RS29910	0.72	+0.5
6,655,384	-		PFLU_RS29910	0.72	+0.7
6,655,384	-		PFLU_RS29910	0.72	+1.1
6,655,512	+				-0.8
6,655,512	+				-0.1
6,655,513	-				-0.9
6,655,513	-				-0.2
6,655,676	+				-2.2
6,655,676	+				+2.6
6,655,677	-				-0.2
6,655,677	-				-1.3
6,655,677	-				-0.2
6,655,677	-				-0.6
6,655,677	-				-1.3
6,655,677	-				-1.0
6,655,677	-				+1.0
6,655,677	-				+1.3
6,655,677	-				-1.9
6,655,677	-				-0.5
6,655,677	-				-1.2
6,655,677	-				-0.4
6,655,689	+				+0.0
6,655,689	+				-0.8
6,655,690	-				-0.3
6,655,690	-				-1.5
6,655,690	-				-0.4
6,655,694	+				+0.2
6,655,695	-				-0.7
6,655,695	-				-0.3
6,655,695	-				-1.0
6,655,695	-				+0.6
6,655,695	-				-2.0
6,655,695	-				+1.5
6,655,695	-				-0.7
6,655,708	-				-1.4
6,655,708	-				-0.3
6,655,755	+				-0.9
6,655,755	+				+1.4
6,655,755	+				+1.0
6,655,845	+				-1.6
6,655,846	-				+0.2
6,655,867	+				-2.3
6,655,867	+				-2.5
6,655,868	-				+2.4
6,655,924	+		PFLU_RS29915	0.13	-0.2
6,655,924	+		PFLU_RS29915	0.13	+1.3
6,655,924	+		PFLU_RS29915	0.13	+1.0
6,655,924	+		PFLU_RS29915	0.13	+0.1
6,655,925	-		PFLU_RS29915	0.13	-0.7