Experiment: Glucose (C) and L-Glutamine (N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS26560 and PFLU_RS26565 overlap by 8 nucleotides PFLU_RS26565 and PFLU_RS26570 are separated by 5 nucleotides PFLU_RS26570 and PFLU_RS26575 are separated by 8 nucleotides
PFLU_RS26560: PFLU_RS26560 - PhoH family protein, at 5,937,605 to 5,938,609
_RS26560
PFLU_RS26565: PFLU_RS26565 - rRNA maturation RNase YbeY, at 5,938,602 to 5,939,096
_RS26565
PFLU_RS26570: PFLU_RS26570 - HlyC/CorC family transporter, at 5,939,102 to 5,939,941
_RS26570
PFLU_RS26575: PFLU_RS26575 - apolipoprotein N-acyltransferase, at 5,939,950 to 5,941,473
_RS26575
Position (kb) 5938
5939
5940 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5937.618 kb on + strand at 5937.618 kb on + strand at 5937.618 kb on + strand at 5937.618 kb on + strand at 5937.618 kb on + strand at 5937.618 kb on + strand at 5937.621 kb on + strand at 5937.621 kb on + strand at 5937.621 kb on + strand at 5937.621 kb on + strand at 5937.621 kb on + strand at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.860 kb on + strand, within PFLU_RS26560 at 5937.928 kb on + strand, within PFLU_RS26560 at 5937.928 kb on + strand, within PFLU_RS26560 at 5937.974 kb on + strand, within PFLU_RS26560 at 5937.974 kb on + strand, within PFLU_RS26560 at 5938.040 kb on + strand, within PFLU_RS26560 at 5938.040 kb on + strand, within PFLU_RS26560 at 5938.040 kb on + strand, within PFLU_RS26560 at 5938.040 kb on + strand, within PFLU_RS26560 at 5938.175 kb on + strand, within PFLU_RS26560 at 5938.190 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.212 kb on + strand, within PFLU_RS26560 at 5938.223 kb on + strand, within PFLU_RS26560 at 5938.223 kb on + strand, within PFLU_RS26560 at 5938.223 kb on + strand, within PFLU_RS26560 at 5938.274 kb on + strand, within PFLU_RS26560 at 5938.274 kb on + strand, within PFLU_RS26560 at 5938.274 kb on + strand, within PFLU_RS26560 at 5938.274 kb on + strand, within PFLU_RS26560 at 5938.473 kb on + strand, within PFLU_RS26560 at 5938.473 kb on + strand, within PFLU_RS26560 at 5938.474 kb on - strand, within PFLU_RS26560 at 5938.537 kb on + strand at 5938.537 kb on + strand at 5938.537 kb on + strand at 5938.538 kb on - strand at 5938.538 kb on - strand at 5938.538 kb on - strand at 5938.538 kb on - strand at 5938.550 kb on + strand at 5938.550 kb on + strand at 5938.550 kb on + strand at 5938.550 kb on + strand at 5938.550 kb on + strand at 5938.551 kb on - strand at 5938.551 kb on - strand at 5938.551 kb on - strand at 5939.040 kb on + strand, within PFLU_RS26565 at 5939.041 kb on - strand, within PFLU_RS26565 at 5939.041 kb on - strand, within PFLU_RS26565 at 5939.074 kb on + strand at 5939.074 kb on + strand at 5939.074 kb on + strand at 5939.074 kb on + strand at 5939.074 kb on + strand at 5939.074 kb on + strand at 5939.075 kb on - strand at 5939.075 kb on - strand at 5939.075 kb on - strand at 5939.075 kb on - strand at 5939.080 kb on + strand at 5939.081 kb on - strand at 5939.081 kb on - strand at 5939.081 kb on - strand at 5939.081 kb on - strand at 5939.081 kb on - strand at 5939.094 kb on + strand at 5939.094 kb on + strand at 5939.095 kb on - strand at 5939.095 kb on - strand at 5939.095 kb on - strand at 5939.101 kb on + strand at 5939.101 kb on + strand at 5939.102 kb on - strand at 5939.102 kb on - strand at 5939.289 kb on + strand, within PFLU_RS26570 at 5939.290 kb on - strand, within PFLU_RS26570 at 5939.290 kb on - strand, within PFLU_RS26570 at 5939.600 kb on + strand, within PFLU_RS26570 at 5939.600 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.693 kb on + strand, within PFLU_RS26570 at 5939.845 kb on + strand, within PFLU_RS26570 at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.929 kb on + strand at 5939.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose (C) and L-Glutamine (N); with TAPS remove 5,937,618 + -0.9 5,937,618 + -0.3 5,937,618 + -0.4 5,937,618 + -0.2 5,937,618 + -0.9 5,937,618 + +0.1 5,937,621 + +0.5 5,937,621 + +1.9 5,937,621 + +0.1 5,937,621 + +2.1 5,937,621 + +1.1 5,937,860 + PFLU_RS26560 0.25 +2.7 5,937,860 + PFLU_RS26560 0.25 -1.8 5,937,860 + PFLU_RS26560 0.25 +0.9 5,937,860 + PFLU_RS26560 0.25 -0.2 5,937,860 + PFLU_RS26560 0.25 -0.4 5,937,860 + PFLU_RS26560 0.25 +2.8 5,937,928 + PFLU_RS26560 0.32 -0.3 5,937,928 + PFLU_RS26560 0.32 +1.5 5,937,974 + PFLU_RS26560 0.37 -0.7 5,937,974 + PFLU_RS26560 0.37 +0.7 5,938,040 + PFLU_RS26560 0.43 +1.8 5,938,040 + PFLU_RS26560 0.43 -0.3 5,938,040 + PFLU_RS26560 0.43 +0.4 5,938,040 + PFLU_RS26560 0.43 +0.6 5,938,175 + PFLU_RS26560 0.57 +0.5 5,938,190 + PFLU_RS26560 0.58 +1.1 5,938,212 + PFLU_RS26560 0.60 -3.1 5,938,212 + PFLU_RS26560 0.60 -1.5 5,938,212 + PFLU_RS26560 0.60 -0.5 5,938,212 + PFLU_RS26560 0.60 +0.2 5,938,212 + PFLU_RS26560 0.60 +1.1 5,938,212 + PFLU_RS26560 0.60 -0.2 5,938,212 + PFLU_RS26560 0.60 -1.5 5,938,212 + PFLU_RS26560 0.60 +0.2 5,938,223 + PFLU_RS26560 0.61 +0.1 5,938,223 + PFLU_RS26560 0.61 -0.3 5,938,223 + PFLU_RS26560 0.61 +0.3 5,938,274 + PFLU_RS26560 0.67 -0.1 5,938,274 + PFLU_RS26560 0.67 +0.5 5,938,274 + PFLU_RS26560 0.67 +0.1 5,938,274 + PFLU_RS26560 0.67 -0.6 5,938,473 + PFLU_RS26560 0.86 -1.8 5,938,473 + PFLU_RS26560 0.86 -2.0 5,938,474 - PFLU_RS26560 0.86 +0.5 5,938,537 + +1.2 5,938,537 + +0.3 5,938,537 + -0.2 5,938,538 - +0.6 5,938,538 - +1.1 5,938,538 - +1.1 5,938,538 - +1.7 5,938,550 + +0.9 5,938,550 + -2.2 5,938,550 + +0.3 5,938,550 + -0.3 5,938,550 + -0.4 5,938,551 - +3.1 5,938,551 - -1.1 5,938,551 - +2.1 5,939,040 + PFLU_RS26565 0.88 -0.4 5,939,041 - PFLU_RS26565 0.89 -1.0 5,939,041 - PFLU_RS26565 0.89 -1.3 5,939,074 + -0.3 5,939,074 + -1.1 5,939,074 + -0.9 5,939,074 + +1.3 5,939,074 + -0.5 5,939,074 + +0.2 5,939,075 - +0.1 5,939,075 - +1.5 5,939,075 - +1.1 5,939,075 - +0.2 5,939,080 + -0.5 5,939,081 - -1.6 5,939,081 - +0.1 5,939,081 - -0.5 5,939,081 - -0.2 5,939,081 - -0.5 5,939,094 + +0.7 5,939,094 + -0.0 5,939,095 - -0.6 5,939,095 - +0.2 5,939,095 - -1.7 5,939,101 + -0.2 5,939,101 + -1.9 5,939,102 - +1.1 5,939,102 - +0.1 5,939,289 + PFLU_RS26570 0.22 +0.1 5,939,290 - PFLU_RS26570 0.22 -0.7 5,939,290 - PFLU_RS26570 0.22 -0.9 5,939,600 + PFLU_RS26570 0.59 -1.9 5,939,600 + PFLU_RS26570 0.59 -0.1 5,939,693 + PFLU_RS26570 0.70 -0.6 5,939,693 + PFLU_RS26570 0.70 -0.3 5,939,693 + PFLU_RS26570 0.70 -0.3 5,939,693 + PFLU_RS26570 0.70 -0.4 5,939,693 + PFLU_RS26570 0.70 -0.5 5,939,693 + PFLU_RS26570 0.70 -0.2 5,939,693 + PFLU_RS26570 0.70 -0.5 5,939,693 + PFLU_RS26570 0.70 +0.9 5,939,693 + PFLU_RS26570 0.70 +0.3 5,939,693 + PFLU_RS26570 0.70 +0.5 5,939,693 + PFLU_RS26570 0.70 +0.2 5,939,693 + PFLU_RS26570 0.70 +0.5 5,939,693 + PFLU_RS26570 0.70 -0.5 5,939,693 + PFLU_RS26570 0.70 +0.3 5,939,693 + PFLU_RS26570 0.70 -0.3 5,939,693 + PFLU_RS26570 0.70 -0.3 5,939,693 + PFLU_RS26570 0.70 -1.1 5,939,693 + PFLU_RS26570 0.70 -0.4 5,939,693 + PFLU_RS26570 0.70 +1.3 5,939,693 + PFLU_RS26570 0.70 -0.8 5,939,845 + PFLU_RS26570 0.88 +1.2 5,939,929 + -0.5 5,939,929 + +1.1 5,939,929 + +1.8 5,939,929 + +0.5 5,939,929 + -0.1 5,939,929 + -0.7 5,939,929 + +0.7 5,939,929 + -0.1 5,939,929 + +0.2 5,939,929 + +0.4 5,939,929 + +0.6 5,939,929 + -1.6 5,939,929 + +0.5 5,939,929 + +1.6 5,939,929 + -0.3 5,939,929 + +0.2 5,939,929 + -2.5 5,939,929 + -0.6 5,939,929 + -0.2 5,939,929 + -0.9 5,939,929 + -0.6 5,939,939 + -0.0
Or see this region's nucleotide sequence