Experiment: Glucose (C) and L-Glutamine (N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS25740 and PFLU_RS25745 are separated by 2 nucleotides PFLU_RS25745 and PFLU_RS25750 are separated by 286 nucleotides PFLU_RS25750 and PFLU_RS25755 overlap by 4 nucleotides
PFLU_RS25740: PFLU_RS25740 - polynucleotide adenylyltransferase PcnB, at 5,747,580 to 5,748,983
_RS25740
PFLU_RS25745: PFLU_RS25745 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 5,748,986 to 5,749,471
_RS25745
PFLU_RS25750: PFLU_RS25750 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 5,749,758 to 5,750,558
_RS25750
PFLU_RS25755: PFLU_RS25755 - pantoate--beta-alanine ligase, at 5,750,555 to 5,751,406
_RS25755
Position (kb) 5749
5750
5751 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5748.763 kb on - strand, within PFLU_RS25740 at 5748.763 kb on - strand, within PFLU_RS25740 at 5748.763 kb on - strand, within PFLU_RS25740 at 5748.831 kb on + strand, within PFLU_RS25740 at 5748.832 kb on - strand, within PFLU_RS25740 at 5748.932 kb on + strand at 5748.981 kb on + strand at 5748.982 kb on - strand at 5748.998 kb on + strand at 5749.541 kb on + strand at 5749.541 kb on + strand at 5749.541 kb on + strand at 5749.542 kb on - strand at 5749.551 kb on - strand at 5749.564 kb on + strand at 5749.564 kb on + strand at 5749.564 kb on + strand at 5749.565 kb on - strand at 5749.565 kb on - strand at 5749.565 kb on - strand at 5749.565 kb on - strand at 5749.565 kb on - strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.613 kb on + strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.614 kb on - strand at 5749.615 kb on + strand at 5749.615 kb on + strand at 5749.615 kb on + strand at 5749.615 kb on + strand at 5749.615 kb on + strand at 5749.615 kb on + strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.616 kb on - strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.665 kb on + strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.666 kb on - strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.667 kb on + strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.668 kb on - strand at 5749.696 kb on + strand at 5749.696 kb on + strand at 5749.697 kb on - strand at 5749.698 kb on + strand at 5749.699 kb on - strand at 5749.699 kb on - strand at 5749.769 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.830 kb on + strand at 5749.831 kb on - strand at 5749.831 kb on - strand at 5749.831 kb on - strand at 5749.831 kb on - strand at 5749.831 kb on - strand at 5749.957 kb on - strand, within PFLU_RS25750 at 5749.957 kb on - strand, within PFLU_RS25750 at 5749.957 kb on - strand, within PFLU_RS25750 at 5750.205 kb on + strand, within PFLU_RS25750 at 5750.206 kb on - strand, within PFLU_RS25750 at 5750.206 kb on - strand, within PFLU_RS25750 at 5750.206 kb on - strand, within PFLU_RS25750 at 5750.206 kb on - strand, within PFLU_RS25750 at 5750.212 kb on + strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.213 kb on - strand, within PFLU_RS25750 at 5750.392 kb on + strand, within PFLU_RS25750 at 5750.392 kb on + strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.393 kb on - strand, within PFLU_RS25750 at 5750.499 kb on + strand at 5750.499 kb on + strand at 5750.500 kb on - strand at 5750.500 kb on - strand at 5750.500 kb on - strand at 5750.566 kb on - strand at 5750.566 kb on - strand at 5750.765 kb on + strand, within PFLU_RS25755 at 5750.765 kb on + strand, within PFLU_RS25755 at 5750.765 kb on + strand, within PFLU_RS25755 at 5750.766 kb on - strand, within PFLU_RS25755 at 5750.849 kb on + strand, within PFLU_RS25755 at 5750.849 kb on + strand, within PFLU_RS25755 at 5750.850 kb on - strand, within PFLU_RS25755 at 5751.128 kb on + strand, within PFLU_RS25755 at 5751.128 kb on + strand, within PFLU_RS25755 at 5751.129 kb on - strand, within PFLU_RS25755 at 5751.129 kb on - strand, within PFLU_RS25755 at 5751.129 kb on - strand, within PFLU_RS25755 at 5751.278 kb on + strand, within PFLU_RS25755 at 5751.278 kb on + strand, within PFLU_RS25755 at 5751.279 kb on - strand, within PFLU_RS25755 at 5751.279 kb on - strand, within PFLU_RS25755 at 5751.279 kb on - strand, within PFLU_RS25755 at 5751.289 kb on - strand, within PFLU_RS25755 at 5751.289 kb on - strand, within PFLU_RS25755 at 5751.289 kb on - strand, within PFLU_RS25755 at 5751.356 kb on + strand at 5751.357 kb on - strand at 5751.357 kb on - strand at 5751.357 kb on - strand at 5751.426 kb on + strand at 5751.427 kb on - strand at 5751.439 kb on + strand at 5751.441 kb on + strand at 5751.441 kb on + strand at 5751.480 kb on + strand at 5751.480 kb on + strand at 5751.480 kb on + strand at 5751.481 kb on - strand at 5751.481 kb on - strand at 5751.481 kb on - strand at 5751.481 kb on - strand at 5751.481 kb on - strand at 5751.491 kb on + strand at 5751.491 kb on + strand at 5751.491 kb on + strand at 5751.491 kb on + strand at 5751.491 kb on + strand at 5751.492 kb on - strand at 5751.497 kb on + strand at 5751.497 kb on + strand at 5751.497 kb on + strand at 5751.497 kb on + strand at 5751.497 kb on + strand at 5751.498 kb on - strand at 5751.498 kb on - strand at 5751.498 kb on - strand at 5751.498 kb on - strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.502 kb on + strand at 5751.503 kb on - strand at 5751.503 kb on - strand at 5751.503 kb on - strand at 5751.516 kb on + strand at 5751.517 kb on - strand at 5751.517 kb on - strand at 5751.517 kb on - strand at 5751.549 kb on + strand at 5751.549 kb on + strand at 5751.549 kb on + strand at 5751.550 kb on - strand at 5751.550 kb on - strand at 5751.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose (C) and L-Glutamine (N); with TAPS remove 5,748,763 - PFLU_RS25740 0.84 -0.5 5,748,763 - PFLU_RS25740 0.84 -1.0 5,748,763 - PFLU_RS25740 0.84 -1.3 5,748,831 + PFLU_RS25740 0.89 +1.5 5,748,832 - PFLU_RS25740 0.89 +0.2 5,748,932 + -0.8 5,748,981 + -1.0 5,748,982 - -0.1 5,748,998 + -0.2 5,749,541 + +0.8 5,749,541 + +0.5 5,749,541 + +0.7 5,749,542 - +0.7 5,749,551 - +0.1 5,749,564 + -0.3 5,749,564 + -0.8 5,749,564 + -1.1 5,749,565 - +0.5 5,749,565 - -0.4 5,749,565 - -0.4 5,749,565 - +2.0 5,749,565 - -0.3 5,749,613 + +0.2 5,749,613 + -0.5 5,749,613 + +0.8 5,749,613 + +1.0 5,749,613 + -0.8 5,749,613 + +0.3 5,749,613 + +0.3 5,749,613 + -0.5 5,749,613 + -0.9 5,749,614 - -1.1 5,749,614 - -0.5 5,749,614 - +0.4 5,749,614 - -1.7 5,749,614 - +0.4 5,749,614 - -0.2 5,749,614 - +2.0 5,749,614 - -0.3 5,749,615 + +0.0 5,749,615 + +0.8 5,749,615 + -1.0 5,749,615 + +0.3 5,749,615 + +1.2 5,749,615 + -0.4 5,749,616 - +0.5 5,749,616 - +0.7 5,749,616 - +0.5 5,749,616 - +1.1 5,749,616 - -0.3 5,749,616 - -2.4 5,749,616 - +0.7 5,749,665 + -0.2 5,749,665 + -0.9 5,749,665 + -0.3 5,749,665 + -0.5 5,749,665 + -0.1 5,749,665 + +0.9 5,749,665 + +1.2 5,749,665 + -0.1 5,749,665 + +0.9 5,749,665 + +1.3 5,749,665 + +0.9 5,749,665 + +0.5 5,749,665 + -0.0 5,749,665 + -0.1 5,749,666 - -0.4 5,749,666 - -1.1 5,749,666 - -1.1 5,749,666 - -1.0 5,749,666 - -1.5 5,749,666 - +0.0 5,749,666 - -1.4 5,749,666 - +1.3 5,749,666 - +0.7 5,749,666 - -0.5 5,749,666 - +0.7 5,749,666 - +0.0 5,749,666 - +1.8 5,749,666 - -0.4 5,749,667 + +1.0 5,749,667 + +1.5 5,749,667 + -0.1 5,749,667 + -2.1 5,749,667 + -0.3 5,749,667 + -0.5 5,749,667 + -0.4 5,749,667 + +0.8 5,749,667 + +1.0 5,749,667 + -0.8 5,749,667 + +1.0 5,749,667 + -0.6 5,749,667 + +1.2 5,749,667 + +0.3 5,749,667 + +0.9 5,749,667 + +0.2 5,749,667 + -1.0 5,749,667 + +0.9 5,749,667 + +2.2 5,749,667 + -0.0 5,749,667 + +2.0 5,749,667 + +2.3 5,749,667 + -1.2 5,749,667 + +0.5 5,749,668 - +0.2 5,749,668 - -0.3 5,749,668 - +0.0 5,749,668 - -0.6 5,749,668 - +1.0 5,749,668 - +0.1 5,749,668 - +0.1 5,749,668 - +0.5 5,749,668 - +0.3 5,749,668 - +0.8 5,749,668 - -1.0 5,749,668 - +0.1 5,749,668 - -0.6 5,749,668 - -2.4 5,749,668 - +0.8 5,749,668 - +1.0 5,749,668 - -0.9 5,749,668 - -0.3 5,749,668 - +1.0 5,749,668 - +0.9 5,749,668 - -0.8 5,749,668 - +0.6 5,749,668 - -0.0 5,749,668 - -0.4 5,749,668 - +1.9 5,749,668 - +0.3 5,749,668 - -0.6 5,749,668 - +0.0 5,749,696 + -0.4 5,749,696 + +0.5 5,749,697 - +0.2 5,749,698 + -0.3 5,749,699 - -1.8 5,749,699 - -0.4 5,749,769 + -1.9 5,749,830 + +0.0 5,749,830 + +0.7 5,749,830 + +0.5 5,749,830 + -1.1 5,749,830 + -0.5 5,749,830 + +0.8 5,749,830 + -0.3 5,749,831 - +2.0 5,749,831 - -1.1 5,749,831 - +2.0 5,749,831 - +0.5 5,749,831 - +1.0 5,749,957 - PFLU_RS25750 0.25 +2.0 5,749,957 - PFLU_RS25750 0.25 +2.0 5,749,957 - PFLU_RS25750 0.25 +2.0 5,750,205 + PFLU_RS25750 0.56 -1.4 5,750,206 - PFLU_RS25750 0.56 +1.0 5,750,206 - PFLU_RS25750 0.56 -0.5 5,750,206 - PFLU_RS25750 0.56 +1.0 5,750,206 - PFLU_RS25750 0.56 -0.3 5,750,212 + PFLU_RS25750 0.57 -1.4 5,750,213 - PFLU_RS25750 0.57 -1.7 5,750,213 - PFLU_RS25750 0.57 -2.4 5,750,213 - PFLU_RS25750 0.57 +0.5 5,750,213 - PFLU_RS25750 0.57 -0.4 5,750,213 - PFLU_RS25750 0.57 -2.0 5,750,213 - PFLU_RS25750 0.57 -1.0 5,750,213 - PFLU_RS25750 0.57 -0.3 5,750,213 - PFLU_RS25750 0.57 -2.1 5,750,213 - PFLU_RS25750 0.57 -1.3 5,750,392 + PFLU_RS25750 0.79 -1.1 5,750,392 + PFLU_RS25750 0.79 -1.8 5,750,393 - PFLU_RS25750 0.79 +0.5 5,750,393 - PFLU_RS25750 0.79 -1.0 5,750,393 - PFLU_RS25750 0.79 +0.5 5,750,393 - PFLU_RS25750 0.79 +0.0 5,750,393 - PFLU_RS25750 0.79 -1.0 5,750,393 - PFLU_RS25750 0.79 -1.5 5,750,393 - PFLU_RS25750 0.79 -0.3 5,750,499 + -2.4 5,750,499 + +0.2 5,750,500 - -1.1 5,750,500 - -0.5 5,750,500 - -1.7 5,750,566 - +0.5 5,750,566 - +1.0 5,750,765 + PFLU_RS25755 0.25 +2.0 5,750,765 + PFLU_RS25755 0.25 +2.0 5,750,765 + PFLU_RS25755 0.25 +2.0 5,750,766 - PFLU_RS25755 0.25 +2.0 5,750,849 + PFLU_RS25755 0.35 +2.0 5,750,849 + PFLU_RS25755 0.35 +1.0 5,750,850 - PFLU_RS25755 0.35 +4.4 5,751,128 + PFLU_RS25755 0.67 +2.0 5,751,128 + PFLU_RS25755 0.67 -0.5 5,751,129 - PFLU_RS25755 0.67 +2.0 5,751,129 - PFLU_RS25755 0.67 +1.0 5,751,129 - PFLU_RS25755 0.67 +2.0 5,751,278 + PFLU_RS25755 0.85 +2.0 5,751,278 + PFLU_RS25755 0.85 +2.0 5,751,279 - PFLU_RS25755 0.85 +2.0 5,751,279 - PFLU_RS25755 0.85 +2.0 5,751,279 - PFLU_RS25755 0.85 +2.0 5,751,289 - PFLU_RS25755 0.86 +1.0 5,751,289 - PFLU_RS25755 0.86 +2.0 5,751,289 - PFLU_RS25755 0.86 +2.0 5,751,356 + +2.0 5,751,357 - +2.0 5,751,357 - +2.0 5,751,357 - +2.0 5,751,426 + -1.0 5,751,427 - +1.0 5,751,439 + +0.9 5,751,441 + -1.7 5,751,441 + +0.0 5,751,480 + +1.0 5,751,480 + -0.2 5,751,480 + -1.4 5,751,481 - +0.5 5,751,481 - -1.1 5,751,481 - -0.2 5,751,481 - +1.0 5,751,481 - +0.9 5,751,491 + -1.1 5,751,491 + -0.2 5,751,491 + +1.0 5,751,491 + +0.6 5,751,491 + -0.7 5,751,492 - +2.0 5,751,497 + +0.5 5,751,497 + -1.4 5,751,497 + -0.1 5,751,497 + +0.3 5,751,497 + -0.2 5,751,498 - -1.0 5,751,498 - -0.8 5,751,498 - +1.4 5,751,498 - -1.5 5,751,502 + -2.1 5,751,502 + -0.3 5,751,502 + -0.1 5,751,502 + -1.0 5,751,502 + -0.3 5,751,502 + +1.8 5,751,502 + +0.5 5,751,502 + +0.1 5,751,503 - -1.8 5,751,503 - +0.5 5,751,503 - -0.5 5,751,516 + +0.4 5,751,517 - +0.1 5,751,517 - -0.3 5,751,517 - -2.0 5,751,549 + +0.2 5,751,549 + -1.0 5,751,549 + +0.5 5,751,550 - -0.5 5,751,550 - +0.4 5,751,550 - -0.5
Or see this region's nucleotide sequence