Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24050

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
5,386,010	-		PFLU_RS24040	0.84	-1.5
5,386,027	+		PFLU_RS24040	0.86	-0.4
5,386,027	+		PFLU_RS24040	0.86	+1.0
5,386,027	+		PFLU_RS24040	0.86	+1.5
5,386,027	+		PFLU_RS24040	0.86	-2.1
5,386,027	+		PFLU_RS24040	0.86	+1.1
5,386,027	+		PFLU_RS24040	0.86	-0.5
5,386,027	+		PFLU_RS24040	0.86	-0.6
5,386,027	+		PFLU_RS24040	0.86	-0.0
5,386,028	-		PFLU_RS24040	0.87	+0.0
5,386,028	-		PFLU_RS24040	0.87	-0.2
5,386,028	-		PFLU_RS24040	0.87	-0.6
5,386,028	-		PFLU_RS24040	0.87	+1.1
5,386,036	+		PFLU_RS24040	0.88	+0.4
5,386,037	-		PFLU_RS24040	0.88	-0.6
5,386,098	+				-0.0
5,386,133	+				-0.8
5,386,163	+				-0.4
5,386,163	+				+0.4
5,386,163	+				+1.2
5,386,163	+				+1.2
5,386,163	+				+1.6
5,386,163	+				-0.4
5,386,163	+				+1.0
5,386,164	-				-0.4
5,386,164	-				+1.1
5,386,164	-				+0.2
5,386,164	-				-0.4
5,386,164	-				+1.0
5,386,164	-				-1.1
5,386,164	-				-1.2
5,386,164	-				+1.7
5,386,164	-				+0.3
5,386,164	-				+2.5
5,386,167	+				+1.0
5,386,167	+				-1.2
5,386,167	+				-0.8
5,386,167	+				+0.8
5,386,167	+				+1.1
5,386,167	+				+1.4
5,386,167	+				-0.0
5,386,167	+				+0.6
5,386,167	+				-0.5
5,386,167	+				+0.6
5,386,167	+				-0.7
5,386,167	+				-1.2
5,386,167	+				+0.8
5,386,167	+				-0.6
5,386,167	+				+0.6
5,386,167	+				+1.0
5,386,167	+				-0.0
5,386,167	+				+1.7
5,386,167	+				+0.5
5,386,167	+				+0.4
5,386,167	+				-1.2
5,386,168	-				+0.2
5,386,168	-				+0.3
5,386,168	-				+0.6
5,386,168	-				+0.1
5,386,168	-				-0.0
5,386,168	-				-0.4
5,386,168	-				-0.8
5,386,168	-				+0.2
5,386,168	-				-0.6
5,386,168	-				-0.5
5,386,168	-				+2.6
5,386,168	-				+0.4
5,386,168	-				-0.5
5,386,168	-				-1.0
5,386,168	-				+1.3
5,386,168	-				-0.8
5,386,168	-				-1.1
5,386,168	-				+1.0
5,386,168	-				-0.0
5,386,168	-				-0.9
5,386,168	-				+0.5
5,386,168	-				-2.1
5,386,168	-				+0.6
5,386,168	-				-0.6
5,386,168	-				-0.0
5,386,168	-				-2.2
5,386,168	-				+1.4
5,386,168	-				-1.3
5,386,168	-				-0.1
5,386,195	+				-1.2
5,386,196	-				+1.4
5,386,293	-		PFLU_RS24045	0.24	-1.2
5,386,322	+		PFLU_RS24045	0.29	-0.4
5,386,322	+		PFLU_RS24045	0.29	+0.4
5,386,323	-		PFLU_RS24045	0.29	+2.0
5,386,323	-		PFLU_RS24045	0.29	-0.4
5,386,323	-		PFLU_RS24045	0.29	+1.7
5,386,395	+		PFLU_RS24045	0.40	+0.6
5,386,444	+		PFLU_RS24045	0.48	+2.4
5,386,445	-		PFLU_RS24045	0.48	+0.5
5,386,445	-		PFLU_RS24045	0.48	+0.2
5,386,445	-		PFLU_RS24045	0.48	-0.2
5,386,580	+		PFLU_RS24045	0.69	+0.5
5,386,580	+		PFLU_RS24045	0.69	+0.4
5,386,580	+		PFLU_RS24045	0.69	+3.0
5,386,580	+		PFLU_RS24045	0.69	-0.8
5,386,581	-		PFLU_RS24045	0.69	+0.1
5,386,581	-		PFLU_RS24045	0.69	-0.3
5,386,581	-		PFLU_RS24045	0.69	-0.2
5,386,581	-		PFLU_RS24045	0.69	-1.9
5,386,581	-		PFLU_RS24045	0.69	-0.1
5,386,581	-		PFLU_RS24045	0.69	+0.4
5,386,581	-		PFLU_RS24045	0.69	+0.6
5,386,592	+		PFLU_RS24045	0.71	-0.0
5,386,593	-		PFLU_RS24045	0.71	+0.6
5,386,593	-		PFLU_RS24045	0.71	-0.6
5,386,652	+		PFLU_RS24045	0.80	-1.1
5,386,653	-		PFLU_RS24045	0.80	+0.5
5,386,667	+		PFLU_RS24045	0.82	+0.4
5,386,749	-				+0.4
5,386,762	-				+1.0
5,386,764	+				-0.8
5,386,764	+				+1.0
5,386,764	+				+0.7
5,386,764	+				-0.6
5,386,764	+				+0.3
5,386,764	+				+0.6
5,386,764	+				+1.0
5,386,764	+				-0.5
5,386,764	+				-2.0
5,386,764	+				+0.2
5,386,764	+				-0.8
5,386,764	+				+0.2
5,386,764	+				-1.8
5,386,764	+				-0.2
5,386,765	-				+0.8
5,386,765	-				-0.4
5,386,765	-				-1.0
5,386,765	-				-0.4
5,386,765	-				-1.0
5,386,765	-				-1.3
5,386,765	-				-0.6
5,386,765	-				-0.6
5,386,768	+				-0.6
5,386,768	+				+1.2
5,386,768	+				+1.2
5,386,768	+				+0.6
5,386,768	+				+2.5
5,386,768	+				+0.5
5,386,768	+				+1.0
5,386,768	+				+1.0
5,386,768	+				+0.6
5,386,768	+				+1.0
5,386,768	+				+0.5
5,386,768	+				+0.7
5,386,768	+				-0.6
5,386,768	+				-0.4
5,386,768	+				+0.4
5,386,768	+				-0.9
5,386,768	+				+1.2
5,386,768	+				-0.8
5,386,768	+				+1.4
5,386,769	-				-0.4
5,386,769	-				+0.0
5,386,769	-				-1.6
5,386,769	-				-0.7
5,386,769	-				+0.5
5,386,769	-				-1.9
5,386,769	-				+0.6
5,386,769	-				-1.7
5,386,769	-				-1.2
5,386,769	-				-0.6
5,386,769	-				-0.1
5,386,769	-				+0.6
5,386,769	-				-1.7
5,386,769	-				-0.7
5,386,769	-				-0.8
5,386,769	-				+0.4
5,386,769	-				-1.4
5,386,769	-				+0.4
5,386,769	-				-0.5
5,386,782	+				-0.2
5,386,782	+				-0.4
5,386,782	+				-0.0
5,386,783	-				+1.1
5,386,783	-				-0.5
5,386,783	-				-0.6
5,386,783	-				+0.5
5,386,797	+				-0.7
5,386,797	+				-0.0
5,386,798	-				+0.5
5,386,798	-				-0.0
5,386,804	+				+0.2
5,386,804	+				+2.4
5,386,804	+				+1.0
5,386,804	+				+0.2
5,386,804	+				-2.6
5,386,804	+				+1.4
5,386,804	+				-0.2
5,386,805	-				-0.4
5,386,835	+				+0.4
5,386,836	-				+0.7
5,386,836	-				+1.7
5,386,836	-				-0.8
5,386,878	+				+0.5
5,386,878	+				-0.5
5,386,879	-				-3.4
5,386,896	-				-1.0
5,386,931	-				+1.0
5,386,948	+				-1.5
5,386,948	+				+1.2
5,386,949	-				+1.0
5,386,949	-				-1.2
5,386,949	-				-0.9
5,386,949	-				-0.2
5,386,991	+				+0.9
5,387,042	+		PFLU_RS24050	0.11	+0.3
5,387,043	-		PFLU_RS24050	0.11	+0.1
5,387,043	-		PFLU_RS24050	0.11	-1.3
5,387,061	+		PFLU_RS24050	0.14	-0.6
5,387,061	+		PFLU_RS24050	0.14	-0.0
5,387,061	+		PFLU_RS24050	0.14	+1.4
5,387,061	+		PFLU_RS24050	0.14	+0.8
5,387,061	+		PFLU_RS24050	0.14	+1.0
5,387,062	-		PFLU_RS24050	0.14	+0.9
5,387,062	-		PFLU_RS24050	0.14	-2.0
5,387,062	-		PFLU_RS24050	0.14	-1.4
5,387,062	-		PFLU_RS24050	0.14	-1.4
5,387,062	-		PFLU_RS24050	0.14	-0.6
5,387,062	-		PFLU_RS24050	0.14	+0.2
5,387,062	-		PFLU_RS24050	0.14	-1.6
5,387,062	-		PFLU_RS24050	0.14	-1.1
5,387,075	+		PFLU_RS24050	0.15	+0.0
5,387,075	+		PFLU_RS24050	0.15	-0.6
5,387,075	+		PFLU_RS24050	0.15	-1.2
5,387,075	+		PFLU_RS24050	0.15	-0.7
5,387,077	+		PFLU_RS24050	0.16	-1.1
5,387,077	+		PFLU_RS24050	0.16	+0.4
5,387,077	+		PFLU_RS24050	0.16	-1.0
5,387,077	+		PFLU_RS24050	0.16	-1.0
5,387,077	+		PFLU_RS24050	0.16	-1.6
5,387,077	+		PFLU_RS24050	0.16	-1.5
5,387,077	+		PFLU_RS24050	0.16	-0.0
5,387,077	+		PFLU_RS24050	0.16	+0.7
5,387,077	+		PFLU_RS24050	0.16	-2.0
5,387,078	-		PFLU_RS24050	0.16	-3.1
5,387,078	-		PFLU_RS24050	0.16	-0.8
5,387,078	-		PFLU_RS24050	0.16	+0.2
5,387,078	-		PFLU_RS24050	0.16	-1.9
5,387,078	-		PFLU_RS24050	0.16	-1.2
5,387,110	+		PFLU_RS24050	0.19	-1.4
5,387,111	-		PFLU_RS24050	0.20	+0.6
5,387,189	-		PFLU_RS24050	0.29	+0.4
5,387,189	-		PFLU_RS24050	0.29	-1.6
5,387,206	+		PFLU_RS24050	0.31	-1.4
5,387,222	-		PFLU_RS24050	0.33	-1.0
5,387,225	+		PFLU_RS24050	0.33	+0.5
5,387,225	+		PFLU_RS24050	0.33	+1.7
5,387,225	+		PFLU_RS24050	0.33	+0.2
5,387,225	+		PFLU_RS24050	0.33	-0.4
5,387,226	-		PFLU_RS24050	0.33	+1.1
5,387,299	+		PFLU_RS24050	0.42	+0.8
5,387,299	+		PFLU_RS24050	0.42	-2.0
5,387,299	+		PFLU_RS24050	0.42	-1.4
5,387,299	+		PFLU_RS24050	0.42	-1.2
5,387,299	+		PFLU_RS24050	0.42	-0.3
5,387,299	+		PFLU_RS24050	0.42	+0.6
5,387,299	+		PFLU_RS24050	0.42	-1.4
5,387,299	+		PFLU_RS24050	0.42	-1.1
5,387,299	+		PFLU_RS24050	0.42	-0.8
5,387,299	+		PFLU_RS24050	0.42	-0.5
5,387,299	+		PFLU_RS24050	0.42	-1.5
5,387,299	+		PFLU_RS24050	0.42	-0.9
5,387,299	+		PFLU_RS24050	0.42	-2.1
5,387,300	-		PFLU_RS24050	0.42	-0.8
5,387,300	-		PFLU_RS24050	0.42	-0.6
5,387,300	-		PFLU_RS24050	0.42	-0.0
5,387,302	+		PFLU_RS24050	0.42	+1.2
5,387,302	+		PFLU_RS24050	0.42	+0.8
5,387,303	-		PFLU_RS24050	0.43	-1.2
5,387,423	+		PFLU_RS24050	0.57	-0.0
5,387,424	-		PFLU_RS24050	0.57	-0.6
5,387,444	+		PFLU_RS24050	0.59	-0.8
5,387,444	+		PFLU_RS24050	0.59	-1.0
5,387,616	-		PFLU_RS24050	0.80	-0.6
5,387,632	+		PFLU_RS24050	0.82	-0.5
5,387,633	-		PFLU_RS24050	0.82	-2.3
5,387,651	-		PFLU_RS24050	0.84	+0.4
5,387,684	+		PFLU_RS24050	0.88	-0.0
5,387,684	+		PFLU_RS24050	0.88	-0.4
5,387,685	-		PFLU_RS24050	0.88	-0.2
5,387,685	-		PFLU_RS24050	0.88	-1.0
5,387,685	-		PFLU_RS24050	0.88	-1.2
5,387,685	-		PFLU_RS24050	0.88	+0.4
5,387,686	+		PFLU_RS24050	0.88	-0.4
5,387,686	+		PFLU_RS24050	0.88	-1.4
5,387,687	-		PFLU_RS24050	0.88	-1.5
5,387,687	-		PFLU_RS24050	0.88	-1.5
5,387,699	+		PFLU_RS24050	0.90	+2.0
5,387,700	-				-0.6
5,387,700	-				-0.2
5,387,755	-				-0.6
5,387,755	-				-0.8
5,387,755	-				-0.0
5,387,755	-				-1.4
5,387,760	+				-0.6
5,387,760	+				-0.0
5,387,761	-				+1.4
5,387,761	-				-2.1
5,387,761	-				-0.4
5,387,761	-				-0.8
5,387,761	-				-0.2
5,387,791	+				-0.8
5,387,791	+				+0.4
5,387,791	+				+2.0
5,387,792	-				-0.4
5,387,792	-				-0.3
5,387,792	-				-1.3
5,387,792	-				-1.0
5,387,792	-				-2.1
5,387,792	-				-1.4
5,387,792	-				-0.6
5,387,792	-				-1.6
5,387,792	-				-0.8
5,387,796	-				-1.0
5,387,796	-				-0.5
5,387,796	-				-0.7
5,387,796	-				+1.1
5,387,796	-				-1.0
5,387,796	-				+1.0
5,387,796	-				-0.5
5,387,796	-				-0.5
5,388,303	-				-0.4
5,388,303	-				+0.1
5,388,321	-				-0.8
5,388,321	-				+0.8
5,388,321	-				-1.1
5,388,339	-				-0.2
5,388,358	+				+0.4
5,388,359	-				-1.2
5,388,359	-				-0.1