Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22605

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
5,088,431	-		PFLU_RS22595	0.88	+1.8
5,088,575	-				+1.8
5,088,617	-				-0.7
5,088,631	-				+3.8
5,088,636	+				-1.2
5,088,636	+				+0.3
5,088,636	+				+0.8
5,088,636	+				-0.5
5,088,637	-				-0.5
5,088,637	-				+1.3
5,088,637	-				-1.0
5,088,637	-				-0.1
5,088,637	-				+1.0
5,088,637	-				+0.6
5,088,643	+				+0.5
5,088,643	+				+0.3
5,088,643	+				+0.3
5,088,644	-				-0.7
5,088,644	-				+0.5
5,088,644	-				+0.3
5,088,644	-				+0.0
5,088,644	-				+0.4
5,088,657	+				+0.8
5,088,657	+				-1.5
5,088,657	+				-0.2
5,088,658	-				-2.5
5,088,658	-				-0.0
5,088,658	-				-0.1
5,088,690	-				+1.8
5,088,712	-				+1.8
5,088,822	+		PFLU_RS22600	0.28	+1.8
5,088,823	-		PFLU_RS22600	0.28	+0.3
5,088,823	-		PFLU_RS22600	0.28	+0.3
5,088,823	-		PFLU_RS22600	0.28	+2.4
5,088,967	-		PFLU_RS22600	0.53	+1.8
5,088,979	-		PFLU_RS22600	0.55	+1.8
5,088,979	-		PFLU_RS22600	0.55	-0.2
5,088,979	-		PFLU_RS22600	0.55	+0.3
5,089,027	-		PFLU_RS22600	0.63	+1.8
5,089,083	-		PFLU_RS22600	0.72	+0.8
5,089,083	-		PFLU_RS22600	0.72	+1.8
5,089,083	-		PFLU_RS22600	0.72	+0.8
5,089,087	-		PFLU_RS22600	0.73	+2.8
5,089,087	-		PFLU_RS22600	0.73	+1.8
5,089,120	-		PFLU_RS22600	0.79	+1.8
5,089,152	-		PFLU_RS22600	0.84	+2.8
5,089,216	-				-0.7
5,089,216	-				-0.5
5,089,216	-				-1.0
5,089,312	+				-1.0
5,089,312	+				-0.2
5,089,312	+				+1.8
5,089,313	-				+0.1
5,089,313	-				+0.6
5,089,313	-				-1.7
5,089,317	+				+0.3
5,089,317	+				+1.8
5,089,317	+				-0.7
5,089,317	+				-0.7
5,089,318	-				-1.5
5,089,342	+				+1.8
5,089,482	+		PFLU_RS22605	0.18	-1.3
5,089,482	+		PFLU_RS22605	0.18	+0.8
5,089,483	-		PFLU_RS22605	0.18	+0.3
5,089,483	-		PFLU_RS22605	0.18	-1.5
5,089,497	+		PFLU_RS22605	0.20	+0.3
5,089,497	+		PFLU_RS22605	0.20	+1.3
5,089,497	+		PFLU_RS22605	0.20	-0.7
5,089,497	+		PFLU_RS22605	0.20	+0.8
5,089,497	+		PFLU_RS22605	0.20	+1.3
5,089,497	+		PFLU_RS22605	0.20	-0.5
5,089,497	+		PFLU_RS22605	0.20	+0.8
5,089,497	+		PFLU_RS22605	0.20	-0.5
5,089,497	+		PFLU_RS22605	0.20	+0.4
5,089,497	+		PFLU_RS22605	0.20	-1.9
5,089,497	+		PFLU_RS22605	0.20	-1.2
5,089,497	+		PFLU_RS22605	0.20	+0.5
5,089,497	+		PFLU_RS22605	0.20	-1.9
5,089,497	+		PFLU_RS22605	0.20	-1.1
5,089,497	+		PFLU_RS22605	0.20	+0.1
5,089,498	-		PFLU_RS22605	0.20	+1.8
5,089,498	-		PFLU_RS22605	0.20	+1.3
5,089,498	-		PFLU_RS22605	0.20	+1.1
5,089,498	-		PFLU_RS22605	0.20	-0.6
5,089,498	-		PFLU_RS22605	0.20	-1.7
5,089,498	-		PFLU_RS22605	0.20	-1.3
5,089,498	-		PFLU_RS22605	0.20	-1.7
5,089,498	-		PFLU_RS22605	0.20	+0.0
5,089,645	+		PFLU_RS22605	0.38	-0.9
5,089,645	+		PFLU_RS22605	0.38	-0.7
5,089,645	+		PFLU_RS22605	0.38	+3.7
5,089,645	+		PFLU_RS22605	0.38	-0.2
5,089,646	-		PFLU_RS22605	0.38	-0.8
5,089,646	-		PFLU_RS22605	0.38	-1.0
5,089,695	+		PFLU_RS22605	0.44	-1.3
5,089,696	-		PFLU_RS22605	0.44	+1.8
5,089,772	+		PFLU_RS22605	0.53	-1.7
5,089,773	-		PFLU_RS22605	0.53	+0.1
5,089,803	+		PFLU_RS22605	0.57	-1.0
5,089,803	+		PFLU_RS22605	0.57	+1.8
5,089,803	+		PFLU_RS22605	0.57	-1.5
5,089,803	+		PFLU_RS22605	0.57	+0.8
5,089,804	-		PFLU_RS22605	0.57	+0.5
5,089,825	+		PFLU_RS22605	0.60	-0.7
5,089,825	+		PFLU_RS22605	0.60	+1.3
5,089,825	+		PFLU_RS22605	0.60	-0.7
5,089,826	-		PFLU_RS22605	0.60	-2.4
5,089,893	+		PFLU_RS22605	0.68	+1.4
5,089,925	+		PFLU_RS22605	0.72	+2.3
5,089,926	-		PFLU_RS22605	0.72	-1.5
5,089,949	+		PFLU_RS22605	0.75	-0.4
5,089,949	+		PFLU_RS22605	0.75	+0.7
5,089,949	+		PFLU_RS22605	0.75	-2.0
5,089,949	+		PFLU_RS22605	0.75	-0.2
5,089,949	+		PFLU_RS22605	0.75	-0.2
5,089,949	+		PFLU_RS22605	0.75	-0.2
5,089,950	-		PFLU_RS22605	0.75	-0.7
5,089,950	-		PFLU_RS22605	0.75	-0.2
5,089,950	-		PFLU_RS22605	0.75	-0.2
5,090,158	+				+1.8
5,090,172	+				+1.3
5,090,172	+				-1.2
5,090,173	-				+0.2
5,090,173	-				+0.3
5,090,196	+		PFLU_RS22610	0.14	+1.2
5,090,196	+		PFLU_RS22610	0.14	+0.2
5,090,196	+		PFLU_RS22610	0.14	+2.1
5,090,197	-		PFLU_RS22610	0.15	+0.0
5,090,197	-		PFLU_RS22610	0.15	-0.2
5,090,197	-		PFLU_RS22610	0.15	+0.4
5,090,197	-		PFLU_RS22610	0.15	-0.2
5,090,215	+		PFLU_RS22610	0.22	-1.6
5,090,215	+		PFLU_RS22610	0.22	-0.5
5,090,215	+		PFLU_RS22610	0.22	-1.3
5,090,215	+		PFLU_RS22610	0.22	+2.1
5,090,215	+		PFLU_RS22610	0.22	-0.2
5,090,216	-		PFLU_RS22610	0.22	-0.2
5,090,216	-		PFLU_RS22610	0.22	+1.6
5,090,406	+				+2.3
5,090,406	+				-0.6
5,090,406	+				-0.6
5,090,406	+				+0.5
5,090,407	-				-1.5
5,090,407	-				+0.7
5,090,407	-				-1.2
5,090,407	-				+1.6
5,090,428	+				-1.2
5,090,429	-				-0.0
5,090,429	-				-1.6
5,090,441	+				-0.4
5,090,442	-				-0.4
5,090,460	+				+0.6
5,090,460	+				-0.0
5,090,460	+				-1.2
5,090,460	+				-0.0
5,090,460	+				+0.3
5,090,460	+				+1.5
5,090,460	+				-0.3
5,090,460	+				+0.0
5,090,460	+				-0.4
5,090,460	+				+0.8
5,090,460	+				-1.2
5,090,460	+				-0.4
5,090,460	+				+1.1
5,090,460	+				-0.4
5,090,460	+				+0.7
5,090,460	+				+0.3
5,090,460	+				-2.0
5,090,460	+				+1.8
5,090,460	+				-1.0
5,090,460	+				-0.7
5,090,461	-				+1.3
5,090,461	-				-0.0
5,090,461	-				-0.4
5,090,461	-				+0.4
5,090,461	-				+0.2
5,090,461	-				-0.4
5,090,461	-				-1.2
5,090,461	-				+0.3
5,090,461	-				-0.5
5,090,461	-				+1.1
5,090,461	-				+1.5
5,090,461	-				+1.4
5,090,461	-				+1.8
5,090,461	-				-0.8
5,090,461	-				+0.4
5,090,461	-				-1.5
5,090,461	-				+1.0
5,090,472	+				-1.9
5,090,472	+				+0.9
5,090,472	+				-0.1
5,090,472	+				+1.3
5,090,472	+				-1.2
5,090,472	+				-0.5
5,090,472	+				-0.7
5,090,472	+				+1.2
5,090,472	+				-0.2
5,090,472	+				+0.8
5,090,472	+				-1.5
5,090,472	+				-1.4
5,090,472	+				-1.7
5,090,472	+				+0.3
5,090,473	-				-0.1
5,090,473	-				-0.5
5,090,473	-				-0.9
5,090,473	-				+1.8
5,090,473	-				-0.7
5,090,473	-				-0.9
5,090,473	-				+0.7
5,090,473	-				+0.5
5,090,473	-				+0.4
5,090,473	-				+0.8
5,090,485	+				+0.0
5,090,486	-				-1.7
5,090,486	-				+0.3
5,090,486	-				-0.2
5,090,610	+		PFLU_RS22615	0.12	-1.9
5,090,610	+		PFLU_RS22615	0.12	+0.9
5,090,610	+		PFLU_RS22615	0.12	-0.4
5,090,610	+		PFLU_RS22615	0.12	+0.4
5,090,610	+		PFLU_RS22615	0.12	-1.2
5,090,610	+		PFLU_RS22615	0.12	-0.7
5,090,610	+		PFLU_RS22615	0.12	+2.3
5,090,610	+		PFLU_RS22615	0.12	+0.7
5,090,611	-		PFLU_RS22615	0.12	+1.0
5,090,611	-		PFLU_RS22615	0.12	-1.4
5,090,611	-		PFLU_RS22615	0.12	+0.3
5,090,611	-		PFLU_RS22615	0.12	+0.8
5,090,611	-		PFLU_RS22615	0.12	-1.7
5,090,612	+		PFLU_RS22615	0.12	-1.2
5,090,674	+		PFLU_RS22615	0.18	-0.2
5,090,674	+		PFLU_RS22615	0.18	-0.2
5,090,674	+		PFLU_RS22615	0.18	-2.0
5,090,675	-		PFLU_RS22615	0.18	+1.3
5,090,675	-		PFLU_RS22615	0.18	+0.3
5,090,675	-		PFLU_RS22615	0.18	+0.4
5,090,675	-		PFLU_RS22615	0.18	-0.7
5,090,675	-		PFLU_RS22615	0.18	-0.9
5,090,694	+		PFLU_RS22615	0.20	-0.2
5,090,694	+		PFLU_RS22615	0.20	-0.6
5,090,694	+		PFLU_RS22615	0.20	+2.8
5,090,694	+		PFLU_RS22615	0.20	+0.3
5,090,695	-		PFLU_RS22615	0.20	-1.0
5,090,767	+		PFLU_RS22615	0.28	-0.2
5,090,800	+		PFLU_RS22615	0.31	-0.5
5,090,800	+		PFLU_RS22615	0.31	-0.3
5,090,801	-		PFLU_RS22615	0.31	-2.1
5,090,801	-		PFLU_RS22615	0.31	-0.1
5,090,801	-		PFLU_RS22615	0.31	+0.4
5,090,936	+		PFLU_RS22615	0.44	+1.2
5,090,936	+		PFLU_RS22615	0.44	-1.0
5,090,936	+		PFLU_RS22615	0.44	-1.3
5,090,937	-		PFLU_RS22615	0.45	+0.3
5,090,937	-		PFLU_RS22615	0.45	+0.7
5,091,014	+		PFLU_RS22615	0.52	+1.8
5,091,014	+		PFLU_RS22615	0.52	-1.7
5,091,014	+		PFLU_RS22615	0.52	+1.4
5,091,014	+		PFLU_RS22615	0.52	-0.7
5,091,015	-		PFLU_RS22615	0.52	-0.1
5,091,015	-		PFLU_RS22615	0.52	+0.8
5,091,025	+		PFLU_RS22615	0.53	-0.6
5,091,025	+		PFLU_RS22615	0.53	-0.2
5,091,025	+		PFLU_RS22615	0.53	+0.7
5,091,026	-		PFLU_RS22615	0.54	-0.0
5,091,026	-		PFLU_RS22615	0.54	+0.1
5,091,026	-		PFLU_RS22615	0.54	+0.5
5,091,035	+		PFLU_RS22615	0.54	-0.5
5,091,035	+		PFLU_RS22615	0.54	+0.3
5,091,035	+		PFLU_RS22615	0.54	+0.6
5,091,035	+		PFLU_RS22615	0.54	+0.9
5,091,035	+		PFLU_RS22615	0.54	+0.1
5,091,036	-		PFLU_RS22615	0.55	-0.2
5,091,036	-		PFLU_RS22615	0.55	-0.5
5,091,036	-		PFLU_RS22615	0.55	-0.1
5,091,037	+		PFLU_RS22615	0.55	+0.3
5,091,037	+		PFLU_RS22615	0.55	+0.8
5,091,037	+		PFLU_RS22615	0.55	-0.0
5,091,037	+		PFLU_RS22615	0.55	-0.2
5,091,037	+		PFLU_RS22615	0.55	-0.0
5,091,037	+		PFLU_RS22615	0.55	-0.0
5,091,037	+		PFLU_RS22615	0.55	+1.0
5,091,037	+		PFLU_RS22615	0.55	-0.9
5,091,037	+		PFLU_RS22615	0.55	-1.6
5,091,037	+		PFLU_RS22615	0.55	+0.4
5,091,037	+		PFLU_RS22615	0.55	-1.2
5,091,037	+		PFLU_RS22615	0.55	-2.6
5,091,037	+		PFLU_RS22615	0.55	+1.1
5,091,037	+		PFLU_RS22615	0.55	-0.3
5,091,037	+		PFLU_RS22615	0.55	-2.5
5,091,037	+		PFLU_RS22615	0.55	-0.5
5,091,037	+		PFLU_RS22615	0.55	-1.9
5,091,037	+		PFLU_RS22615	0.55	+0.3
5,091,037	+		PFLU_RS22615	0.55	-0.6
5,091,037	+		PFLU_RS22615	0.55	+1.8
5,091,037	+		PFLU_RS22615	0.55	+1.3
5,091,037	+		PFLU_RS22615	0.55	-0.4
5,091,037	+		PFLU_RS22615	0.55	+0.3
5,091,037	+		PFLU_RS22615	0.55	+1.4
5,091,038	-		PFLU_RS22615	0.55	+1.3
5,091,038	-		PFLU_RS22615	0.55	-0.8
5,091,038	-		PFLU_RS22615	0.55	+1.4
5,091,038	-		PFLU_RS22615	0.55	+0.4
5,091,038	-		PFLU_RS22615	0.55	+1.3
5,091,038	-		PFLU_RS22615	0.55	+0.4
5,091,038	-		PFLU_RS22615	0.55	-0.3
5,091,038	-		PFLU_RS22615	0.55	-0.6
5,091,038	-		PFLU_RS22615	0.55	+0.9
5,091,038	-		PFLU_RS22615	0.55	+0.5
5,091,038	-		PFLU_RS22615	0.55	+0.5
5,091,038	-		PFLU_RS22615	0.55	-0.5
5,091,038	-		PFLU_RS22615	0.55	+2.2
5,091,038	-		PFLU_RS22615	0.55	-0.3
5,091,038	-		PFLU_RS22615	0.55	-1.3
5,091,038	-		PFLU_RS22615	0.55	-1.5
5,091,038	-		PFLU_RS22615	0.55	-1.1
5,091,038	-		PFLU_RS22615	0.55	-0.7
5,091,038	-		PFLU_RS22615	0.55	-0.4
5,091,038	-		PFLU_RS22615	0.55	+0.2
5,091,038	-		PFLU_RS22615	0.55	+1.0
5,091,044	+		PFLU_RS22615	0.55	+0.1
5,091,158	+		PFLU_RS22615	0.67	+0.8